Gene annotation
Transcriptome id Sobic.005G159600.1
Synonym Sb05g022180
Functional annotation lymphoid organ expressed yellow head virus receptor protein, putative, expressed
UniProt A0A1B6PST2
Pfam PF06886
Panther DB PTHR31358 PTHR31358:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35880 : TPX2 (targeting protein for Xklp2) protein family
RAP-DB (Rice) LOC_Os11g36340.1 : lymphoid organ expressed yellow head virus receptor protein, putative, expressed
MaizeGDB (Corn) Zm00025a033845 , Zm00025a015780 , Zm00025a039262
Brachypodium KQJ88151
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G159600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G277900 "D61(Ortholog in rice:Morinaka et al., 2006(PubMedID : 31659871)@systemin receptor SR160 precursor, putative, expressed K13415: protein brassinosteroid insensitive 1
2 Sobic.004G053300 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
3 Sobic.004G134100 glycosyltransferase, putative, expressed -
4 Sobic.008G086200 expressed protein -
5 Sobic.009G123500 TKL_IRAK_CR4L.5 - The CR4L subfamily has homology with Crinkly4, expressed -
6 Sobic.002G393200 CAMK_CAMK_like.36 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
7 Sobic.004G225700 F-box/LRR-repeat protein 2, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
8 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
9 Sobic.002G168600 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
10 Sobic.004G006700 tetratricopeptide repeat domain containing protein, expressed -
11 Sobic.008G000800 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
12 Sobic.003G347300 TBC domain containing protein, expressed -
13 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
14 Sobic.002G218700 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
15 Sobic.006G254500 IQ calmodulin-binding motif family protein, putative, expressed -
16 Sobic.003G194600 ZOS1-10 - C2H2 zinc finger protein, expressed -
17 Sobic.002G130900 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
18 Sobic.001G352600 expressed protein -
19 Sobic.007G187400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
20 Sobic.008G008400 F-box/LRR-repeat protein 3, putative, expressed -


Gene co-expression network
sample Sobic005G159600 Sobic005G159600 Sobic003G277900 Sobic003G277900 Sobic005G159600--Sobic003G277900 Sobic004G053300 Sobic004G053300 Sobic005G159600--Sobic004G053300 Sobic004G134100 Sobic004G134100 Sobic005G159600--Sobic004G134100 Sobic008G086200 Sobic008G086200 Sobic005G159600--Sobic008G086200 Sobic009G123500 Sobic009G123500 Sobic005G159600--Sobic009G123500 Sobic002G393200 Sobic002G393200 Sobic005G159600--Sobic002G393200 Sobic004G225700 Sobic004G225700 Sobic005G159600--Sobic004G225700 Sobic009G026200 Sobic009G026200 Sobic005G159600--Sobic009G026200 Sobic002G168600 Sobic002G168600 Sobic005G159600--Sobic002G168600 Sobic003G277900--Sobic004G053300 Sobic003G277900--Sobic005G159600 Sobic001G494100 Sobic001G494100 Sobic003G277900--Sobic001G494100 Sobic006G046600 Sobic006G046600 Sobic003G277900--Sobic006G046600 Sobic008G000800 Sobic008G000800 Sobic003G277900--Sobic008G000800 Sobic003G277900--Sobic008G086200 Sobic003G277900--Sobic009G123500 Sobic001G315400 Sobic001G315400 Sobic003G277900--Sobic001G315400 Sobic007G187400 Sobic007G187400 Sobic003G277900--Sobic007G187400 Sobic004G053300--Sobic003G277900 Sobic004G053300--Sobic008G000800 Sobic004G053300--Sobic005G159600 Sobic008G099500 Sobic008G099500 Sobic004G053300--Sobic008G099500 Sobic004G053300--Sobic001G494100 Sobic003G445900 Sobic003G445900 Sobic004G053300--Sobic003G445900 Sobic004G227500 Sobic004G227500 Sobic004G053300--Sobic004G227500 Sobic004G054200 Sobic004G054200 Sobic004G053300--Sobic004G054200 Sobic004G053300--Sobic008G086200 Sobic004G134100--Sobic009G026200 Sobic010G242900 Sobic010G242900 Sobic004G134100--Sobic010G242900 Sobic001G069800 Sobic001G069800 Sobic004G134100--Sobic001G069800 Sobic004G006700 Sobic004G006700 Sobic004G134100--Sobic004G006700 Sobic004G134100--Sobic005G159600 Sobic010G138500 Sobic010G138500 Sobic004G134100--Sobic010G138500 Sobic001G215900 Sobic001G215900 Sobic004G134100--Sobic001G215900 Sobic001G366800 Sobic001G366800 Sobic004G134100--Sobic001G366800 Sobic003G151300 Sobic003G151300 Sobic004G134100--Sobic003G151300 Sobic008G086200--Sobic004G225700 Sobic009G175200 Sobic009G175200 Sobic008G086200--Sobic009G175200 Sobic003G174900 Sobic003G174900 Sobic008G086200--Sobic003G174900 Sobic003G375000 Sobic003G375000 Sobic008G086200--Sobic003G375000 Sobic008G086200--Sobic009G123500 Sobic008G190500 Sobic008G190500 Sobic008G086200--Sobic008G190500 Sobic004G289500 Sobic004G289500 Sobic008G086200--Sobic004G289500 Sobic009G164900 Sobic009G164900 Sobic008G086200--Sobic009G164900 Sobic010G118700 Sobic010G118700 Sobic008G086200--Sobic010G118700 Sobic009G123500--Sobic008G086200 Sobic009G123500--Sobic005G159600 Sobic009G123500--Sobic003G277900 Sobic003G347300 Sobic003G347300 Sobic009G123500--Sobic003G347300 Sobic009G123500--Sobic008G190500 Sobic009G123500--Sobic004G006700 Sobic001G435201 Sobic001G435201 Sobic009G123500--Sobic001G435201 Sobic009G123500--Sobic010G118700 Sobic009G123500--Sobic004G053300 Sobic008G148500 Sobic008G148500 Sobic002G393200--Sobic008G148500 Sobic006G254500 Sobic006G254500 Sobic002G393200--Sobic006G254500 Sobic005G204700 Sobic005G204700 Sobic002G393200--Sobic005G204700 Sobic004G152200 Sobic004G152200 Sobic002G393200--Sobic004G152200 Sobic002G161700 Sobic002G161700 Sobic002G393200--Sobic002G161700 Sobic003G131200 Sobic003G131200 Sobic002G393200--Sobic003G131200 Sobic009G206500 Sobic009G206500 Sobic002G393200--Sobic009G206500 Sobic002G143200 Sobic002G143200 Sobic002G393200--Sobic002G143200 Sobic006G267500 Sobic006G267500 Sobic002G393200--Sobic006G267500 Sobic004G225700--Sobic008G086200 Sobic002G218700 Sobic002G218700 Sobic004G225700--Sobic002G218700 Sobic003G077500 Sobic003G077500 Sobic004G225700--Sobic003G077500 Sobic004G225700--Sobic002G393200 Sobic004G225700--Sobic009G175200 Sobic001G385400 Sobic001G385400 Sobic004G225700--Sobic001G385400 Sobic004G225700--Sobic005G159600 Sobic004G225700--Sobic006G254500 Sobic004G225700--Sobic004G134100 Sobic009G026200--Sobic003G151300 Sobic009G026200--Sobic004G134100 Sobic009G026200--Sobic001G069800 Sobic008G174800 Sobic008G174800 Sobic009G026200--Sobic008G174800 Sobic010G224900 Sobic010G224900 Sobic009G026200--Sobic010G224900 Sobic008G008400 Sobic008G008400 Sobic009G026200--Sobic008G008400 Sobic004G051300 Sobic004G051300 Sobic009G026200--Sobic004G051300 Sobic009G026200--Sobic004G006700 Sobic001G230900 Sobic001G230900 Sobic009G026200--Sobic001G230900 Sobic002G168600--Sobic010G242900 Sobic002G168600--Sobic001G215900 Sobic002G168600--Sobic004G134100 Sobic006G130501 Sobic006G130501 Sobic002G168600--Sobic006G130501 Sobic009G013700 Sobic009G013700 Sobic002G168600--Sobic009G013700 Sobic002G168600--Sobic005G159600 Sobic004G247300 Sobic004G247300 Sobic002G168600--Sobic004G247300 Sobic005G054700 Sobic005G054700 Sobic002G168600--Sobic005G054700 Sobic002G168600--Sobic008G086200
Octagon: transcription factors


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