Gene annotation
Transcriptome id Sobic.007G187400.1
Synonym Sb07g025730
Functional annotation zinc finger DHHC domain-containing protein, putative, expressed
UniProt C5YHL6
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF60
NCBI CDD KOG1311; DHHC-type Zn-finger proteins
KEGG Orthology K16675; palmitoyltransferase ZDHHC9/14/18
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G26935 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os08g42620.1 : zinc finger DHHC domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a033603
Brachypodium KQJ99195
Barley HORVU7Hr1G055570.9 , HORVU7Hr1G055570.8 , HORVU7Hr1G055570.3 , HORVU7Hr1G055570.2 , HORVU7Hr1G055570.1 , HORVU7Hr1G055570.7 , HORVU7Hr1G055570.6 , HORVU7Hr1G055570.5 , HORVU7Hr1G055570.4 , HORVU7Hr1G055570.19 , HORVU7Hr1G055570.18 , HORVU7Hr1G055570.13 , HORVU7Hr1G055570.12 , HORVU7Hr1G055570.11 , HORVU7Hr1G055570.10 , HORVU7Hr1G055570.17 , HORVU7Hr1G055570.16 , HORVU7Hr1G055570.15 , HORVU7Hr1G055570.14
Wheat TraesCS7B02G163400 , TraesCS7A02G265400 , TraesCS7D02G266100 , TraesCS7D02G266100 , TraesCS7D02G266100 , TraesCS7B02G163600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G162000 - -
2 Sobic.001G347100 tetratricopeptide-like helical, putative, expressed -
3 Sobic.001G149100 vegetative storage protein, putative, expressed -
4 Sobic.001G408300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.002G218700 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
6 Sobic.003G375000 RNA recognition motif containing protein, putative, expressed -
7 Sobic.003G277900 "D61(Ortholog in rice:Morinaka et al., 2006(PubMedID : 31659871)@systemin receptor SR160 precursor, putative, expressed K13415: protein brassinosteroid insensitive 1
8 Sobic.010G252700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cullin family domain containing protein, putative, expressed K03349: anaphase-promoting complex subunit 2
9 Sobic.001G494100 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
10 Sobic.004G152200 glycosyltransferase, putative, expressed -
11 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
12 Sobic.008G000800 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
13 Sobic.008G066900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
14 Sobic.005G123900 ATP binding protein, putative, expressed K17592: sacsin
15 Sobic.004G135500 - -
16 Sobic.010G049300 expressed protein -
17 Sobic.004G025100 pentatricopeptide repeat-containing protein, putative, expressed -
18 Sobic.010G161900 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.003G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
20 Sobic.003G347300 TBC domain containing protein, expressed -


Gene co-expression network
sample Sobic007G187400 Sobic007G187400 Sobic002G162000 Sobic002G162000 Sobic007G187400--Sobic002G162000 Sobic001G347100 Sobic001G347100 Sobic007G187400--Sobic001G347100 Sobic001G149100 Sobic001G149100 Sobic007G187400--Sobic001G149100 Sobic001G408300 Sobic001G408300 Sobic007G187400--Sobic001G408300 Sobic002G218700 Sobic002G218700 Sobic007G187400--Sobic002G218700 Sobic003G375000 Sobic003G375000 Sobic007G187400--Sobic003G375000 Sobic003G277900 Sobic003G277900 Sobic007G187400--Sobic003G277900 Sobic010G252700 Sobic010G252700 Sobic007G187400--Sobic010G252700 Sobic001G494100 Sobic001G494100 Sobic007G187400--Sobic001G494100 Sobic006G272500 Sobic006G272500 Sobic002G162000--Sobic006G272500 Sobic002G142500 Sobic002G142500 Sobic002G162000--Sobic002G142500 Sobic002G162000--Sobic007G187400 Sobic009G124800 Sobic009G124800 Sobic002G162000--Sobic009G124800 Sobic008G015200 Sobic008G015200 Sobic002G162000--Sobic008G015200 Sobic006G262100 Sobic006G262100 Sobic002G162000--Sobic006G262100 Sobic005G204100 Sobic005G204100 Sobic002G162000--Sobic005G204100 Sobic002G370400 Sobic002G370400 Sobic002G162000--Sobic002G370400 Sobic002G002100 Sobic002G002100 Sobic002G162000--Sobic002G002100 Sobic001G347100--Sobic001G149100 Sobic001G391101 Sobic001G391101 Sobic001G347100--Sobic001G391101 Sobic001G081300 Sobic001G081300 Sobic001G347100--Sobic001G081300 Sobic009G238700 Sobic009G238700 Sobic001G347100--Sobic009G238700 Sobic007G179600 Sobic007G179600 Sobic001G347100--Sobic007G179600 Sobic003G299200 Sobic003G299200 Sobic001G347100--Sobic003G299200 Sobic004G241000 Sobic004G241000 Sobic001G347100--Sobic004G241000 Sobic006G069100 Sobic006G069100 Sobic001G347100--Sobic006G069100 Sobic009G155400 Sobic009G155400 Sobic001G347100--Sobic009G155400 Sobic001G149100--Sobic001G347100 Sobic001G149100--Sobic003G299200 Sobic001G149100--Sobic010G252700 Sobic008G179000 Sobic008G179000 Sobic001G149100--Sobic008G179000 Sobic001G149100--Sobic004G241000 Sobic008G163400 Sobic008G163400 Sobic001G149100--Sobic008G163400 Sobic003G239000 Sobic003G239000 Sobic001G149100--Sobic003G239000 Sobic001G149100--Sobic006G069100 Sobic002G267600 Sobic002G267600 Sobic001G149100--Sobic002G267600 Sobic007G006800 Sobic007G006800 Sobic001G408300--Sobic007G006800 Sobic010G250800 Sobic010G250800 Sobic001G408300--Sobic010G250800 Sobic010G065800 Sobic010G065800 Sobic001G408300--Sobic010G065800 Sobic010G038800 Sobic010G038800 Sobic001G408300--Sobic010G038800 Sobic001G061800 Sobic001G061800 Sobic001G408300--Sobic001G061800 Sobic006G208400 Sobic006G208400 Sobic001G408300--Sobic006G208400 Sobic005G088900 Sobic005G088900 Sobic001G408300--Sobic005G088900 Sobic009G010300 Sobic009G010300 Sobic001G408300--Sobic009G010300 Sobic001G408300--Sobic010G252700 Sobic003G347300 Sobic003G347300 Sobic002G218700--Sobic003G347300 Sobic010G046400 Sobic010G046400 Sobic002G218700--Sobic010G046400 Sobic001G247200 Sobic001G247200 Sobic002G218700--Sobic001G247200 Sobic009G030300 Sobic009G030300 Sobic002G218700--Sobic009G030300 Sobic010G256000 Sobic010G256000 Sobic002G218700--Sobic010G256000 Sobic003G131200 Sobic003G131200 Sobic002G218700--Sobic003G131200 Sobic004G227500 Sobic004G227500 Sobic002G218700--Sobic004G227500 Sobic009G253400 Sobic009G253400 Sobic002G218700--Sobic009G253400 Sobic004G225700 Sobic004G225700 Sobic002G218700--Sobic004G225700 Sobic008G086200 Sobic008G086200 Sobic003G375000--Sobic008G086200 Sobic003G174900 Sobic003G174900 Sobic003G375000--Sobic003G174900 Sobic009G175200 Sobic009G175200 Sobic003G375000--Sobic009G175200 Sobic003G375000--Sobic007G187400 Sobic003G375000--Sobic001G494100 Sobic006G248300 Sobic006G248300 Sobic003G375000--Sobic006G248300 Sobic003G375000--Sobic004G225700 Sobic003G375000--Sobic003G277900 Sobic003G375000--Sobic005G204100 Sobic004G053300 Sobic004G053300 Sobic003G277900--Sobic004G053300 Sobic005G159600 Sobic005G159600 Sobic003G277900--Sobic005G159600 Sobic003G277900--Sobic001G494100 Sobic006G046600 Sobic006G046600 Sobic003G277900--Sobic006G046600 Sobic008G000800 Sobic008G000800 Sobic003G277900--Sobic008G000800 Sobic003G277900--Sobic008G086200 Sobic009G123500 Sobic009G123500 Sobic003G277900--Sobic009G123500 Sobic001G315400 Sobic001G315400 Sobic003G277900--Sobic001G315400 Sobic003G277900--Sobic007G187400 Sobic010G252700--Sobic008G179000 Sobic007G123100 Sobic007G123100 Sobic010G252700--Sobic007G123100 Sobic009G052100 Sobic009G052100 Sobic010G252700--Sobic009G052100 Sobic002G362200 Sobic002G362200 Sobic010G252700--Sobic002G362200 Sobic010G252700--Sobic001G149100 Sobic008G031200 Sobic008G031200 Sobic010G252700--Sobic008G031200 Sobic008G090000 Sobic008G090000 Sobic010G252700--Sobic008G090000 Sobic006G071628 Sobic006G071628 Sobic010G252700--Sobic006G071628 Sobic010G252700--Sobic010G250800 Sobic001G494100--Sobic006G046600 Sobic008G169400 Sobic008G169400 Sobic001G494100--Sobic008G169400 Sobic001G494100--Sobic005G204100 Sobic001G494100--Sobic004G227500 Sobic001G494100--Sobic003G277900 Sobic001G494100--Sobic006G262100 Sobic002G216600 Sobic002G216600 Sobic001G494100--Sobic002G216600 Sobic004G199700 Sobic004G199700 Sobic001G494100--Sobic004G199700 Sobic001G494100--Sobic001G315400
Octagon: transcription factors


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