Gene annotation
Transcriptome id Sobic.003G103000.1
Synonym Sb03g008630, HT1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
protein kinase domain containing protein, expressed
UniProt C5XEZ8
Pfam PF14531
Panther DB PTHR23257 PTHR23257:SF475
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G62400 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g01740.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a023809
Brachypodium KQK02299
Barley -
Wheat TraesCS3A02G001500 , TraesCS3B02G000400 , TraesCS3D02G010000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G128000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
2 Sobic.010G161900 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.007G187400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
4 Sobic.004G006700 tetratricopeptide repeat domain containing protein, expressed -
5 Sobic.002G218700 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
6 Sobic.002G162000 - -
7 Sobic.007G090701 - -
8 Sobic.002G232500 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
9 Sobic.003G201700 tyrosine protein kinase domain containing protein, putative, expressed -
10 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
11 Sobic.004G247300 cysteine-rich repeat secretory protein precursor, putative, expressed -
12 Sobic.001G009400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
13 Sobic.001G385500 - -
14 Sobic.001G366800 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
15 Sobic.008G109100 expressed protein -
16 Sobic.008G066900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
17 Sobic.006G126300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
18 Sobic.004G134100 glycosyltransferase, putative, expressed -
19 Sobic.009G013900 ankyrin repeat domain-containing protein 28, putative, expressed -
20 Sobic.008G147400 "responsible for fertility restoration, localized in anthers"(PubMedID : 20585750)@tetratricopeptide-like helical, putative, expressed -


Gene co-expression network
sample Sobic003G103000 Sobic003G103000 Sobic003G128000 Sobic003G128000 Sobic003G103000--Sobic003G128000 Sobic010G161900 Sobic010G161900 Sobic003G103000--Sobic010G161900 Sobic007G187400 Sobic007G187400 Sobic003G103000--Sobic007G187400 Sobic004G006700 Sobic004G006700 Sobic003G103000--Sobic004G006700 Sobic002G218700 Sobic002G218700 Sobic003G103000--Sobic002G218700 Sobic002G162000 Sobic002G162000 Sobic003G103000--Sobic002G162000 Sobic007G090701 Sobic007G090701 Sobic003G103000--Sobic007G090701 Sobic002G232500 Sobic002G232500 Sobic003G103000--Sobic002G232500 Sobic003G201700 Sobic003G201700 Sobic003G103000--Sobic003G201700 Sobic001G392100 Sobic001G392100 Sobic003G128000--Sobic001G392100 Sobic009G155400 Sobic009G155400 Sobic003G128000--Sobic009G155400 Sobic001G009400 Sobic001G009400 Sobic003G128000--Sobic001G009400 Sobic008G163400 Sobic008G163400 Sobic003G128000--Sobic008G163400 Sobic004G217900 Sobic004G217900 Sobic003G128000--Sobic004G217900 Sobic001G149100 Sobic001G149100 Sobic003G128000--Sobic001G149100 Sobic003G239000 Sobic003G239000 Sobic003G128000--Sobic003G239000 Sobic001G347100 Sobic001G347100 Sobic003G128000--Sobic001G347100 Sobic001G254400 Sobic001G254400 Sobic003G128000--Sobic001G254400 Sobic002G023400 Sobic002G023400 Sobic010G161900--Sobic002G023400 Sobic005G123900 Sobic005G123900 Sobic010G161900--Sobic005G123900 Sobic004G325300 Sobic004G325300 Sobic010G161900--Sobic004G325300 Sobic008G167100 Sobic008G167100 Sobic010G161900--Sobic008G167100 Sobic005G054700 Sobic005G054700 Sobic010G161900--Sobic005G054700 Sobic004G247300 Sobic004G247300 Sobic010G161900--Sobic004G247300 Sobic010G161900--Sobic003G103000 Sobic003G320500 Sobic003G320500 Sobic010G161900--Sobic003G320500 Sobic010G161900--Sobic007G187400 Sobic007G187400--Sobic002G162000 Sobic007G187400--Sobic001G347100 Sobic007G187400--Sobic001G149100 Sobic001G408300 Sobic001G408300 Sobic007G187400--Sobic001G408300 Sobic007G187400--Sobic002G218700 Sobic003G375000 Sobic003G375000 Sobic007G187400--Sobic003G375000 Sobic003G277900 Sobic003G277900 Sobic007G187400--Sobic003G277900 Sobic010G252700 Sobic010G252700 Sobic007G187400--Sobic010G252700 Sobic001G494100 Sobic001G494100 Sobic007G187400--Sobic001G494100 Sobic004G134100 Sobic004G134100 Sobic004G006700--Sobic004G134100 Sobic010G224900 Sobic010G224900 Sobic004G006700--Sobic010G224900 Sobic001G069800 Sobic001G069800 Sobic004G006700--Sobic001G069800 Sobic001G215500 Sobic001G215500 Sobic004G006700--Sobic001G215500 Sobic009G026200 Sobic009G026200 Sobic004G006700--Sobic009G026200 Sobic002G427300 Sobic002G427300 Sobic004G006700--Sobic002G427300 Sobic004G051300 Sobic004G051300 Sobic004G006700--Sobic004G051300 Sobic009G123500 Sobic009G123500 Sobic004G006700--Sobic009G123500 Sobic002G393200 Sobic002G393200 Sobic004G006700--Sobic002G393200 Sobic003G347300 Sobic003G347300 Sobic002G218700--Sobic003G347300 Sobic010G046400 Sobic010G046400 Sobic002G218700--Sobic010G046400 Sobic001G247200 Sobic001G247200 Sobic002G218700--Sobic001G247200 Sobic009G030300 Sobic009G030300 Sobic002G218700--Sobic009G030300 Sobic010G256000 Sobic010G256000 Sobic002G218700--Sobic010G256000 Sobic003G131200 Sobic003G131200 Sobic002G218700--Sobic003G131200 Sobic004G227500 Sobic004G227500 Sobic002G218700--Sobic004G227500 Sobic009G253400 Sobic009G253400 Sobic002G218700--Sobic009G253400 Sobic004G225700 Sobic004G225700 Sobic002G218700--Sobic004G225700 Sobic006G272500 Sobic006G272500 Sobic002G162000--Sobic006G272500 Sobic002G142500 Sobic002G142500 Sobic002G162000--Sobic002G142500 Sobic002G162000--Sobic007G187400 Sobic009G124800 Sobic009G124800 Sobic002G162000--Sobic009G124800 Sobic008G015200 Sobic008G015200 Sobic002G162000--Sobic008G015200 Sobic006G262100 Sobic006G262100 Sobic002G162000--Sobic006G262100 Sobic005G204100 Sobic005G204100 Sobic002G162000--Sobic005G204100 Sobic002G370400 Sobic002G370400 Sobic002G162000--Sobic002G370400 Sobic002G002100 Sobic002G002100 Sobic002G162000--Sobic002G002100 Sobic001G261537 Sobic001G261537 Sobic007G090701--Sobic001G261537 Sobic007G090701--Sobic010G046400 Sobic007G090701--Sobic001G009400 Sobic001G187800 Sobic001G187800 Sobic007G090701--Sobic001G187800 Sobic003G156766 Sobic003G156766 Sobic007G090701--Sobic003G156766 Sobic007G090701--Sobic009G155400 Sobic006G100000 Sobic006G100000 Sobic007G090701--Sobic006G100000 Sobic005G154700 Sobic005G154700 Sobic007G090701--Sobic005G154700 Sobic002G344500 Sobic002G344500 Sobic007G090701--Sobic002G344500 Sobic001G061600 Sobic001G061600 Sobic002G232500--Sobic001G061600 Sobic008G068400 Sobic008G068400 Sobic002G232500--Sobic008G068400 Sobic005G054600 Sobic005G054600 Sobic002G232500--Sobic005G054600 Sobic007G154800 Sobic007G154800 Sobic002G232500--Sobic007G154800 Sobic006G062400 Sobic006G062400 Sobic002G232500--Sobic006G062400 Sobic006G132200 Sobic006G132200 Sobic002G232500--Sobic006G132200 Sobic002G318900 Sobic002G318900 Sobic002G232500--Sobic002G318900 Sobic004G240900 Sobic004G240900 Sobic002G232500--Sobic004G240900 Sobic003G029300 Sobic003G029300 Sobic002G232500--Sobic003G029300 Sobic006G167300 Sobic006G167300 Sobic003G201700--Sobic006G167300 Sobic003G201700--Sobic004G225700 Sobic003G201700--Sobic004G134100 Sobic003G201700--Sobic002G002100 Sobic003G201700--Sobic002G218700 Sobic003G201700--Sobic003G277900 Sobic010G050700 Sobic010G050700 Sobic003G201700--Sobic010G050700 Sobic008G086200 Sobic008G086200 Sobic003G201700--Sobic008G086200 Sobic001G217100 Sobic001G217100 Sobic003G201700--Sobic001G217100
Octagon: transcription factors


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