Gene annotation
Transcriptome id Sobic.009G013900.1,Sobic.009G013900.2
Synonym XBAT31, Sb09g001370
Functional annotation ankyrin repeat domain-containing protein 28, putative, expressed
UniProt B3VTB0 , C5YYJ6 , A0A1Z5R1K7
Pfam PF12796
Panther DB PTHR24128 PTHR24128:SF14
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28840 : XB3 ortholog 1 in Arabidopsis thaliana
RAP-DB (Rice) LOC_Os05g02130.1 : ankyrin repeat domain-containing protein 28, putative, expressed
MaizeGDB (Corn) Zm00025a001840 , Zm00025a025818 , Zm00025a038258 , Zm00025a040940 , Zm00025a052756
Brachypodium KQK11787 , KQK07698
Barley HORVU1Hr1G005260.4 , HORVU1Hr1G005260.6 , HORVU4Hr1G059710.8 , HORVU4Hr1G059710.9 , HORVU1Hr1G005260.7 , HORVU4Hr1G059710.1 , HORVU4Hr1G059710.4 , HORVU1Hr1G005260.17 , HORVU1Hr1G005260.18 , HORVU1Hr1G005260.19 , HORVU1Hr1G005260.16 , HORVU1Hr1G005260.14 , HORVU1Hr1G005260.15 , HORVU1Hr1G005260.12 , HORVU1Hr1G005260.13 , HORVU1Hr1G005260.10 , HORVU1Hr1G005260.11 , HORVU4Hr1G059710.10 , HORVU4Hr1G059710.11 , HORVU1Hr1G005260.8 , HORVU1Hr1G005260.9 , HORVU1Hr1G005260.5 , HORVU1Hr1G005260.1 , HORVU1Hr1G005260.2 , HORVU1Hr1G005260.3
Wheat TraesCS1A02G034300 , TraesCS1A02G034300 , TraesCS4A02G097000 , TraesCS4A02G097000 , TraesCS1D02G035300 , TraesCS4D02G208300 , TraesCS1B02G050200 , TraesCS1B02G050200 , TraesCS1B02G050200 , TraesCS1D02G035300
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G013900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G164700 h/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed K11128: GAR1, H/ACA ribonucleoprotein complex subunit 1
2 Sobic.001G230900 - K07910: Ras-related protein Rab-18
3 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
4 Sobic.001G040300 expressed protein -
5 Sobic.008G136000 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
6 Sobic.009G213600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@green ripe-like, putative, expressed -
7 Sobic.007G187400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
8 Sobic.010G060600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
9 Sobic.008G133500 diaminopimelate epimerase, chloroplast precursor, putative, expressed K01778: diaminopimelate epimerase
10 Sobic.001G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
11 Sobic.004G247300 cysteine-rich repeat secretory protein precursor, putative, expressed -
12 Sobic.003G128000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
13 Sobic.002G183300 GTP binding protein, putative, expressed -
14 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
15 Sobic.003G181600 early-responsive to dehydration protein-related, putative, expressed -
16 Sobic.008G174800 DNA binding protein, putative, expressed -
17 Sobic.001G516500 expansin precursor, putative, expressed -
18 Sobic.002G088700 domain of unknown function domain containing protein, expressed -
19 Sobic.002G380000 TRM112, putative, expressed K15448: TRM112, multifunctional methyltransferase subunit TRM112
20 Sobic.004G134100 glycosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic009G013900 Sobic009G013900 Sobic005G164700 Sobic005G164700 Sobic009G013900--Sobic005G164700 Sobic001G230900 Sobic001G230900 Sobic009G013900--Sobic001G230900 Sobic009G026200 Sobic009G026200 Sobic009G013900--Sobic009G026200 Sobic001G040300 Sobic001G040300 Sobic009G013900--Sobic001G040300 Sobic008G136000 Sobic008G136000 Sobic009G013900--Sobic008G136000 Sobic009G213600 Sobic009G213600 Sobic009G013900--Sobic009G213600 Sobic007G187400 Sobic007G187400 Sobic009G013900--Sobic007G187400 Sobic010G060600 Sobic010G060600 Sobic009G013900--Sobic010G060600 Sobic008G133500 Sobic008G133500 Sobic009G013900--Sobic008G133500 Sobic007G034400 Sobic007G034400 Sobic005G164700--Sobic007G034400 Sobic002G115000 Sobic002G115000 Sobic005G164700--Sobic002G115000 Sobic006G201500 Sobic006G201500 Sobic005G164700--Sobic006G201500 Sobic002G045100 Sobic002G045100 Sobic005G164700--Sobic002G045100 Sobic008G135000 Sobic008G135000 Sobic005G164700--Sobic008G135000 Sobic001G085400 Sobic001G085400 Sobic005G164700--Sobic001G085400 Sobic008G021100 Sobic008G021100 Sobic005G164700--Sobic008G021100 Sobic001G058900 Sobic001G058900 Sobic005G164700--Sobic001G058900 Sobic006G156000 Sobic006G156000 Sobic005G164700--Sobic006G156000 Sobic010G238700 Sobic010G238700 Sobic001G230900--Sobic010G238700 Sobic009G036900 Sobic009G036900 Sobic001G230900--Sobic009G036900 Sobic010G144400 Sobic010G144400 Sobic001G230900--Sobic010G144400 Sobic002G068300 Sobic002G068300 Sobic001G230900--Sobic002G068300 Sobic003G024800 Sobic003G024800 Sobic001G230900--Sobic003G024800 Sobic008G132800 Sobic008G132800 Sobic001G230900--Sobic008G132800 Sobic010G228600 Sobic010G228600 Sobic001G230900--Sobic010G228600 Sobic001G090000 Sobic001G090000 Sobic001G230900--Sobic001G090000 Sobic001G230900--Sobic001G040300 Sobic003G151300 Sobic003G151300 Sobic009G026200--Sobic003G151300 Sobic004G134100 Sobic004G134100 Sobic009G026200--Sobic004G134100 Sobic001G069800 Sobic001G069800 Sobic009G026200--Sobic001G069800 Sobic008G174800 Sobic008G174800 Sobic009G026200--Sobic008G174800 Sobic010G224900 Sobic010G224900 Sobic009G026200--Sobic010G224900 Sobic008G008400 Sobic008G008400 Sobic009G026200--Sobic008G008400 Sobic004G051300 Sobic004G051300 Sobic009G026200--Sobic004G051300 Sobic004G006700 Sobic004G006700 Sobic009G026200--Sobic004G006700 Sobic009G026200--Sobic001G230900 Sobic007G163700 Sobic007G163700 Sobic001G040300--Sobic007G163700 Sobic001G083200 Sobic001G083200 Sobic001G040300--Sobic001G083200 Sobic001G040300--Sobic003G024800 Sobic008G138600 Sobic008G138600 Sobic001G040300--Sobic008G138600 Sobic006G143500 Sobic006G143500 Sobic001G040300--Sobic006G143500 Sobic001G040300--Sobic001G230900 Sobic001G517600 Sobic001G517600 Sobic001G040300--Sobic001G517600 Sobic004G032000 Sobic004G032000 Sobic001G040300--Sobic004G032000 Sobic002G353500 Sobic002G353500 Sobic001G040300--Sobic002G353500 Sobic001G428400 Sobic001G428400 Sobic008G136000--Sobic001G428400 Sobic002G270300 Sobic002G270300 Sobic008G136000--Sobic002G270300 Sobic008G136000--Sobic003G024800 Sobic003G328800 Sobic003G328800 Sobic008G136000--Sobic003G328800 Sobic004G349100 Sobic004G349100 Sobic008G136000--Sobic004G349100 Sobic004G077000 Sobic004G077000 Sobic008G136000--Sobic004G077000 Sobic001G512600 Sobic001G512600 Sobic008G136000--Sobic001G512600 Sobic001G420700 Sobic001G420700 Sobic008G136000--Sobic001G420700 Sobic010G163900 Sobic010G163900 Sobic008G136000--Sobic010G163900 Sobic009G213700 Sobic009G213700 Sobic009G213600--Sobic009G213700 Sobic003G414600 Sobic003G414600 Sobic009G213600--Sobic003G414600 Sobic008G004100 Sobic008G004100 Sobic009G213600--Sobic008G004100 Sobic002G392800 Sobic002G392800 Sobic009G213600--Sobic002G392800 Sobic008G062900 Sobic008G062900 Sobic009G213600--Sobic008G062900 Sobic010G151200 Sobic010G151200 Sobic009G213600--Sobic010G151200 Sobic009G246100 Sobic009G246100 Sobic009G213600--Sobic009G246100 Sobic001G453900 Sobic001G453900 Sobic009G213600--Sobic001G453900 Sobic001G112700 Sobic001G112700 Sobic009G213600--Sobic001G112700 Sobic002G162000 Sobic002G162000 Sobic007G187400--Sobic002G162000 Sobic001G347100 Sobic001G347100 Sobic007G187400--Sobic001G347100 Sobic001G149100 Sobic001G149100 Sobic007G187400--Sobic001G149100 Sobic001G408300 Sobic001G408300 Sobic007G187400--Sobic001G408300 Sobic002G218700 Sobic002G218700 Sobic007G187400--Sobic002G218700 Sobic003G375000 Sobic003G375000 Sobic007G187400--Sobic003G375000 Sobic003G277900 Sobic003G277900 Sobic007G187400--Sobic003G277900 Sobic010G252700 Sobic010G252700 Sobic007G187400--Sobic010G252700 Sobic001G494100 Sobic001G494100 Sobic007G187400--Sobic001G494100 Sobic009G059500 Sobic009G059500 Sobic010G060600--Sobic009G059500 Sobic010G060600--Sobic005G164700 Sobic010G060600--Sobic001G112700 Sobic002G280700 Sobic002G280700 Sobic010G060600--Sobic002G280700 Sobic010G060600--Sobic008G004100 Sobic002G332100 Sobic002G332100 Sobic010G060600--Sobic002G332100 Sobic003G198500 Sobic003G198500 Sobic010G060600--Sobic003G198500 Sobic002G252000 Sobic002G252000 Sobic010G060600--Sobic002G252000 Sobic003G294100 Sobic003G294100 Sobic010G060600--Sobic003G294100 Sobic008G185900 Sobic008G185900 Sobic008G133500--Sobic008G185900 Sobic004G177100 Sobic004G177100 Sobic008G133500--Sobic004G177100 Sobic006G179700 Sobic006G179700 Sobic008G133500--Sobic006G179700 Sobic008G133500--Sobic009G013900 Sobic006G242300 Sobic006G242300 Sobic008G133500--Sobic006G242300 Sobic008G171800 Sobic008G171800 Sobic008G133500--Sobic008G171800 Sobic006G177300 Sobic006G177300 Sobic008G133500--Sobic006G177300 Sobic001G041200 Sobic001G041200 Sobic008G133500--Sobic001G041200 Sobic003G128000 Sobic003G128000 Sobic008G133500--Sobic003G128000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.