Gene annotation
Transcriptome id Sobic.008G147400.2
Synonym fertility restorer gene1, Rf1, Sb08g019750
Functional annotation "responsible for fertility restoration, localized in anthers" (PubMedID : 20585750)
tetratricopeptide-like helical, putative, expressed
UniProt A0A1Z5R6V7
Pfam PF01535 PF13041
Panther DB PTHR24015 PTHR24015:SF816
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35130 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os04g39410.1 : pentatricopeptide, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU1Hr1G083680.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G182600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
2 Sobic.008G100400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"SMK1(Ortholog in maize:Li et al., 2014)"(PubMedID : 31659912)@tetratricopeptide-like helical, putative, expressed -
3 Sobic.002G344500 pentatricopeptide, putative, expressed K18213: proteinaceous RNase P
4 Sobic.010G099300 - K03501: gidB, 16S rRNA (guanine527-N7)-methyltransferase
5 Sobic.003G051500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
6 Sobic.005G028300 Rf1, mitochondrial precursor, putative, expressed -
7 Sobic.001G322600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.009G096100 endoribonuclease Dicer, putative, expressed -
9 Sobic.003G419800 pentatricopeptide repeat protein PPR1106-17, putative, expressed -
10 Sobic.008G056900 RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed K10755: replication factor C subunit 2/4
11 Sobic.003G322200 membrane-associated salt-inducible protein, putative, expressed -
12 Sobic.004G247800 SET domain-containing protein, putative, expressed -
13 Sobic.002G141900 -(PubMedID : 26976818)@Citrate transporter protein, putative, expressed -
14 Sobic.001G040600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA topoisomerase 2, putative, expressed K02469: DNA gyrase subunit A
15 Sobic.001G321400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB2, putative, expressed -
16 Sobic.002G380100 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
17 Sobic.002G191100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
18 Sobic.010G091500 pentatricopeptide, putative, expressed -
19 Sobic.001G061600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed -
20 Sobic.001G228300 SAP domain containing protein, expressed -


Gene co-expression network
sample Sobic008G147400 Sobic008G147400 Sobic007G182600 Sobic007G182600 Sobic008G147400--Sobic007G182600 Sobic008G100400 Sobic008G100400 Sobic008G147400--Sobic008G100400 Sobic002G344500 Sobic002G344500 Sobic008G147400--Sobic002G344500 Sobic010G099300 Sobic010G099300 Sobic008G147400--Sobic010G099300 Sobic003G051500 Sobic003G051500 Sobic008G147400--Sobic003G051500 Sobic005G028300 Sobic005G028300 Sobic008G147400--Sobic005G028300 Sobic001G322600 Sobic001G322600 Sobic008G147400--Sobic001G322600 Sobic009G096100 Sobic009G096100 Sobic008G147400--Sobic009G096100 Sobic003G419800 Sobic003G419800 Sobic008G147400--Sobic003G419800 Sobic007G182600--Sobic008G100400 Sobic007G182600--Sobic010G099300 Sobic001G061600 Sobic001G061600 Sobic007G182600--Sobic001G061600 Sobic001G081300 Sobic001G081300 Sobic007G182600--Sobic001G081300 Sobic001G040600 Sobic001G040600 Sobic007G182600--Sobic001G040600 Sobic007G182600--Sobic008G147400 Sobic007G182600--Sobic003G051500 Sobic010G252000 Sobic010G252000 Sobic007G182600--Sobic010G252000 Sobic002G380100 Sobic002G380100 Sobic007G182600--Sobic002G380100 Sobic008G100400--Sobic007G182600 Sobic008G100400--Sobic001G040600 Sobic003G336500 Sobic003G336500 Sobic008G100400--Sobic003G336500 Sobic010G157700 Sobic010G157700 Sobic008G100400--Sobic010G157700 Sobic008G100400--Sobic008G147400 Sobic008G100400--Sobic009G096100 Sobic008G100400--Sobic001G081300 Sobic008G100400--Sobic010G099300 Sobic009G148200 Sobic009G148200 Sobic008G100400--Sobic009G148200 Sobic003G322200 Sobic003G322200 Sobic002G344500--Sobic003G322200 Sobic002G344500--Sobic001G322600 Sobic008G056900 Sobic008G056900 Sobic002G344500--Sobic008G056900 Sobic002G344500--Sobic009G096100 Sobic003G407600 Sobic003G407600 Sobic002G344500--Sobic003G407600 Sobic006G226300 Sobic006G226300 Sobic002G344500--Sobic006G226300 Sobic004G036700 Sobic004G036700 Sobic002G344500--Sobic004G036700 Sobic001G422500 Sobic001G422500 Sobic002G344500--Sobic001G422500 Sobic008G152300 Sobic008G152300 Sobic002G344500--Sobic008G152300 Sobic010G099300--Sobic001G040600 Sobic010G099300--Sobic007G182600 Sobic007G060600 Sobic007G060600 Sobic010G099300--Sobic007G060600 Sobic010G099300--Sobic001G081300 Sobic001G437801 Sobic001G437801 Sobic010G099300--Sobic001G437801 Sobic001G049800 Sobic001G049800 Sobic010G099300--Sobic001G049800 Sobic010G099300--Sobic003G051500 Sobic001G395300 Sobic001G395300 Sobic010G099300--Sobic001G395300 Sobic006G271900 Sobic006G271900 Sobic010G099300--Sobic006G271900 Sobic001G391101 Sobic001G391101 Sobic003G051500--Sobic001G391101 Sobic001G001200 Sobic001G001200 Sobic003G051500--Sobic001G001200 Sobic003G051500--Sobic005G028300 Sobic003G051500--Sobic001G040600 Sobic003G051500--Sobic001G081300 Sobic003G051500--Sobic003G419800 Sobic003G051500--Sobic007G182600 Sobic003G051500--Sobic010G099300 Sobic004G217900 Sobic004G217900 Sobic003G051500--Sobic004G217900 Sobic002G389200 Sobic002G389200 Sobic005G028300--Sobic002G389200 Sobic005G028300--Sobic003G051500 Sobic002G251800 Sobic002G251800 Sobic005G028300--Sobic002G251800 Sobic005G028300--Sobic001G001200 Sobic005G028300--Sobic003G419800 Sobic003G014700 Sobic003G014700 Sobic005G028300--Sobic003G014700 Sobic005G028300--Sobic001G391101 Sobic002G084400 Sobic002G084400 Sobic005G028300--Sobic002G084400 Sobic010G083900 Sobic010G083900 Sobic005G028300--Sobic010G083900 Sobic001G322600--Sobic010G083900 Sobic009G163600 Sobic009G163600 Sobic001G322600--Sobic009G163600 Sobic001G322600--Sobic002G344500 Sobic001G322600--Sobic003G014700 Sobic004G354000 Sobic004G354000 Sobic001G322600--Sobic004G354000 Sobic010G224700 Sobic010G224700 Sobic001G322600--Sobic010G224700 Sobic001G322600--Sobic003G407600 Sobic001G322600--Sobic005G028300 Sobic002G378100 Sobic002G378100 Sobic001G322600--Sobic002G378100 Sobic009G096100--Sobic008G056900 Sobic002G192500 Sobic002G192500 Sobic009G096100--Sobic002G192500 Sobic009G096100--Sobic010G157700 Sobic001G485600 Sobic001G485600 Sobic009G096100--Sobic001G485600 Sobic006G056000 Sobic006G056000 Sobic009G096100--Sobic006G056000 Sobic007G043900 Sobic007G043900 Sobic009G096100--Sobic007G043900 Sobic009G096100--Sobic002G344500 Sobic009G096100--Sobic002G380100 Sobic007G077700 Sobic007G077700 Sobic009G096100--Sobic007G077700 Sobic003G419800--Sobic005G028300 Sobic003G419800--Sobic001G001200 Sobic007G179600 Sobic007G179600 Sobic003G419800--Sobic007G179600 Sobic003G419800--Sobic001G081300 Sobic003G419800--Sobic003G051500 Sobic003G419800--Sobic001G391101 Sobic001G390900 Sobic001G390900 Sobic003G419800--Sobic001G390900 Sobic003G419800--Sobic003G014700 Sobic003G419800--Sobic007G182600
Octagon: transcription factors


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