Gene annotation
| Transcriptome id | Sobic.008G015200.2,Sobic.008G015200.1 |
|---|---|
| Synonym | GRL, NAP1, Sb08g001340, NAPP |
| Functional annotation | NAP1, putative, expressed |
| UniProt | C5YQL5 |
| Pfam | PF09735 |
| Panther DB | PTHR12093 PTHR12093:SF10 |
| NCBI CDD | - |
| KEGG Orthology | K05750; NCKAP1, NCK-associated protein 1 |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT2G35110 : transcription activators |
|---|---|
| RAP-DB (Rice) | LOC_Os08g43130.1 : NAP1, putative, expressed |
| MaizeGDB (Corn) | Zm00025a053694 |
| Brachypodium | KQJ99252 |
| Barley | HORVU7Hr1G056570.10 , HORVU7Hr1G056570.11 , HORVU7Hr1G056570.12 , HORVU7Hr1G056570.13 , HORVU7Hr1G056570.14 , HORVU7Hr1G056570.15 , HORVU7Hr1G056570.2 , HORVU7Hr1G056570.3 , HORVU7Hr1G056570.1 , HORVU7Hr1G056570.6 , HORVU7Hr1G056570.7 , HORVU7Hr1G056570.4 , HORVU7Hr1G056570.5 , HORVU7Hr1G056570.8 , HORVU7Hr1G056570.9 |
| Wheat | TraesCS7A02G268900 , TraesCS7A02G268900 , TraesCS7A02G268900 , TraesCS7A02G268900 , TraesCS7B02G167200 , TraesCS7D02G269500 , TraesCS7D02G269500 , TraesCS7D02G269500 , TraesCS7D02G269500 , TraesCS7D02G269500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G385400 | guanine nucleotide exchange factor, putative, expressed | - |
| 2 | Sobic.008G192700 | ATMAP70 protein, putative, expressed | - |
| 3 | Sobic.002G374400 | -(PubMedID : 23108465)@"DEP2(Ortholog in rice:Li et al., 2010)"(PubMedID : 31659864)@expressed protein | - |
| 4 | Sobic.002G074000 | expressed protein | - |
| 5 | Sobic.009G052100 | tubulin/FtsZ domain containing protein, putative, expressed | K10389: tubulin gamma |
| 6 | Sobic.009G167100 | TBC domain containing protein, expressed | - |
| 7 | Sobic.006G179300 | OsFBX64 - F-box domain containing protein, expressed | - |
| 8 | Sobic.002G143200 | kinesin motor domain containing protein, putative, expressed | K10395: kinesin family member 4 |
| 9 | Sobic.009G049200 | Spc97 / Spc98 family protein, putative, expressed | K16571: TUBGCP4, gamma-tubulin complex component 4 |
| 10 | Sobic.003G027800 | protein kinase family protein, putative, expressed | - |
| 11 | Sobic.002G320600 | HEAT repeat family protein, putative, expressed | - |
| 12 | Sobic.005G021900 | expressed protein | - |
| 13 | Sobic.002G162000 | - | - |
| 14 | Sobic.009G061000 | DNA binding protein, putative, expressed | - |
| 15 | Sobic.003G311500 | double-stranded RNA binding motif containing protein, expressed | - |
| 16 | Sobic.010G250800 | DNA binding protein, putative, expressed | - |
| 17 | Sobic.007G166800 | domain of unknown function DUF966 domain containing protein, expressed | - |
| 18 | Sobic.008G169400 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed | - |
| 19 | Sobic.001G143600 | pattern formation protein EMB30, putative, expressed | K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 |
| 20 | Sobic.006G254500 | IQ calmodulin-binding motif family protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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