Gene annotation
Transcriptome id Sobic.002G374400.2,Sobic.002G374400.1
Synonym Erect panicle2, Sb02g039210, ep2-ex8 ;Erect panicle2, ep2-ex8 , ep2-ex7
Functional annotation - (PubMedID : 23108465)
"DEP2(Ortholog in rice:Li et al., 2010)" (PubMedID : 31659864)
expressed protein
UniProt I2AW40 , I2AW50 , A0A1B6QFJ1 , A0A0A0UM15 , A0A1B6QFJ9 , A0A0A0UKU6 , A0A0A0UMD4
Pfam -
Panther DB PTHR31008 PTHR31008:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14172 : -
RAP-DB (Rice) LOC_Os07g42410.1 : expressed protein
MaizeGDB (Corn) Zm00025a015211 , Zm00025a048759
Brachypodium KQK15129
Barley HORVU1Hr1G011030.1 , HORVU4Hr1G090930.2 , HORVU4Hr1G090930.1 , HORVU2Hr1G031030.8 , HORVU2Hr1G031030.5 , HORVU2Hr1G031030.4 , HORVU2Hr1G031030.7 , HORVU2Hr1G031030.6 , HORVU2Hr1G031030.1 , HORVU2Hr1G031030.3 , HORVU2Hr1G031030.2 , HORVU0Hr1G030640.1
Wheat TraesCS2B02G194900 , TraesCS2B02G194900 , TraesCS2D02G176200 , TraesCS2D02G176200 , TraesCS2D02G176200 , TraesCS2D02G176200 , TraesCS2A02G168600 , TraesCS2A02G168600 , TraesCS2A02G168600 , TraesCS2A02G168600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G015200 NAP1, putative, expressed K05750: NCKAP1, NCK-associated protein 1
2 Sobic.002G074000 expressed protein -
3 Sobic.003G197100 beta-galactosidase, putative, expressed -
4 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
5 Sobic.008G192700 ATMAP70 protein, putative, expressed -
6 Sobic.001G349700 CPuORF35 - conserved peptide uORF-containing transcript, expressed -
7 Sobic.009G167100 TBC domain containing protein, expressed -
8 Sobic.006G179300 OsFBX64 - F-box domain containing protein, expressed -
9 Sobic.002G143200 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
10 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
11 Sobic.003G027800 protein kinase family protein, putative, expressed -
12 Sobic.005G064100 expressed protein -
13 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -
14 Sobic.009G061000 DNA binding protein, putative, expressed -
15 Sobic.007G166800 domain of unknown function DUF966 domain containing protein, expressed -
16 Sobic.003G420300 zinc finger protein, putative, expressed -
17 Sobic.001G201000 protein transport protein-related, putative, expressed -
18 Sobic.003G031700 protein kinase family protein, putative, expressed -
19 Sobic.006G162000 kinesin motor domain containing protein, expressed K11498: centromeric protein E
20 Sobic.006G257200 kinesin motor domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G374400 Sobic002G374400 Sobic008G015200 Sobic008G015200 Sobic002G374400--Sobic008G015200 Sobic002G074000 Sobic002G074000 Sobic002G374400--Sobic002G074000 Sobic003G197100 Sobic003G197100 Sobic002G374400--Sobic003G197100 Sobic002G320600 Sobic002G320600 Sobic002G374400--Sobic002G320600 Sobic008G192700 Sobic008G192700 Sobic002G374400--Sobic008G192700 Sobic001G349700 Sobic001G349700 Sobic002G374400--Sobic001G349700 Sobic009G167100 Sobic009G167100 Sobic002G374400--Sobic009G167100 Sobic006G179300 Sobic006G179300 Sobic002G374400--Sobic006G179300 Sobic002G143200 Sobic002G143200 Sobic002G374400--Sobic002G143200 Sobic001G385400 Sobic001G385400 Sobic008G015200--Sobic001G385400 Sobic008G015200--Sobic008G192700 Sobic008G015200--Sobic002G374400 Sobic008G015200--Sobic002G074000 Sobic009G052100 Sobic009G052100 Sobic008G015200--Sobic009G052100 Sobic008G015200--Sobic009G167100 Sobic008G015200--Sobic006G179300 Sobic008G015200--Sobic002G143200 Sobic009G049200 Sobic009G049200 Sobic008G015200--Sobic009G049200 Sobic003G307200 Sobic003G307200 Sobic002G074000--Sobic003G307200 Sobic002G417000 Sobic002G417000 Sobic002G074000--Sobic002G417000 Sobic007G087800 Sobic007G087800 Sobic002G074000--Sobic007G087800 Sobic004G267600 Sobic004G267600 Sobic002G074000--Sobic004G267600 Sobic001G493900 Sobic001G493900 Sobic002G074000--Sobic001G493900 Sobic001G008300 Sobic001G008300 Sobic002G074000--Sobic001G008300 Sobic009G202801 Sobic009G202801 Sobic002G074000--Sobic009G202801 Sobic010G129700 Sobic010G129700 Sobic002G074000--Sobic010G129700 Sobic005G055600 Sobic005G055600 Sobic002G074000--Sobic005G055600 Sobic003G197100--Sobic002G374400 Sobic003G197100--Sobic002G320600 Sobic003G197100--Sobic001G349700 Sobic003G078300 Sobic003G078300 Sobic003G197100--Sobic003G078300 Sobic001G349650 Sobic001G349650 Sobic003G197100--Sobic001G349650 Sobic005G064100 Sobic005G064100 Sobic003G197100--Sobic005G064100 Sobic006G257200 Sobic006G257200 Sobic003G197100--Sobic006G257200 Sobic001G437500 Sobic001G437500 Sobic003G197100--Sobic001G437500 Sobic010G165100 Sobic010G165100 Sobic003G197100--Sobic010G165100 Sobic003G031700 Sobic003G031700 Sobic002G320600--Sobic003G031700 Sobic001G201000 Sobic001G201000 Sobic002G320600--Sobic001G201000 Sobic003G420300 Sobic003G420300 Sobic002G320600--Sobic003G420300 Sobic003G292700 Sobic003G292700 Sobic002G320600--Sobic003G292700 Sobic010G211800 Sobic010G211800 Sobic002G320600--Sobic010G211800 Sobic002G362700 Sobic002G362700 Sobic002G320600--Sobic002G362700 Sobic003G226700 Sobic003G226700 Sobic002G320600--Sobic003G226700 Sobic008G127550 Sobic008G127550 Sobic002G320600--Sobic008G127550 Sobic004G328300 Sobic004G328300 Sobic002G320600--Sobic004G328300 Sobic001G285200 Sobic001G285200 Sobic008G192700--Sobic001G285200 Sobic008G192700--Sobic008G015200 Sobic010G049300 Sobic010G049300 Sobic008G192700--Sobic010G049300 Sobic008G192700--Sobic002G074000 Sobic008G148500 Sobic008G148500 Sobic008G192700--Sobic008G148500 Sobic006G272500 Sobic006G272500 Sobic008G192700--Sobic006G272500 Sobic002G419200 Sobic002G419200 Sobic008G192700--Sobic002G419200 Sobic001G507200 Sobic001G507200 Sobic008G192700--Sobic001G507200 Sobic001G026800 Sobic001G026800 Sobic008G192700--Sobic001G026800 Sobic001G349700--Sobic001G349650 Sobic001G349700--Sobic002G374400 Sobic001G349700--Sobic003G197100 Sobic002G161700 Sobic002G161700 Sobic001G349700--Sobic002G161700 Sobic002G214700 Sobic002G214700 Sobic001G349700--Sobic002G214700 Sobic007G166800 Sobic007G166800 Sobic001G349700--Sobic007G166800 Sobic003G231100 Sobic003G231100 Sobic001G349700--Sobic003G231100 Sobic006G188800 Sobic006G188800 Sobic001G349700--Sobic006G188800 Sobic001G349700--Sobic008G015200 Sobic010G250800 Sobic010G250800 Sobic009G167100--Sobic010G250800 Sobic009G061000 Sobic009G061000 Sobic009G167100--Sobic009G061000 Sobic009G167100--Sobic006G257200 Sobic009G167100--Sobic001G385400 Sobic009G167100--Sobic008G015200 Sobic009G167100--Sobic002G320600 Sobic003G027800 Sobic003G027800 Sobic009G167100--Sobic003G027800 Sobic009G167100--Sobic009G052100 Sobic009G167100--Sobic008G192700 Sobic003G360300 Sobic003G360300 Sobic006G179300--Sobic003G360300 Sobic008G080500 Sobic008G080500 Sobic006G179300--Sobic008G080500 Sobic006G179300--Sobic008G015200 Sobic006G179300--Sobic003G027800 Sobic007G125700 Sobic007G125700 Sobic006G179300--Sobic007G125700 Sobic008G045000 Sobic008G045000 Sobic006G179300--Sobic008G045000 Sobic004G342300 Sobic004G342300 Sobic006G179300--Sobic004G342300 Sobic006G179300--Sobic001G385400 Sobic002G219900 Sobic002G219900 Sobic006G179300--Sobic002G219900 Sobic002G143200--Sobic001G385400 Sobic006G140600 Sobic006G140600 Sobic002G143200--Sobic006G140600 Sobic008G088842 Sobic008G088842 Sobic002G143200--Sobic008G088842 Sobic002G098500 Sobic002G098500 Sobic002G143200--Sobic002G098500 Sobic002G143200--Sobic008G015200 Sobic003G435500 Sobic003G435500 Sobic002G143200--Sobic003G435500 Sobic001G367100 Sobic001G367100 Sobic002G143200--Sobic001G367100 Sobic004G341700 Sobic004G341700 Sobic002G143200--Sobic004G341700 Sobic002G143200--Sobic008G192700
Octagon: transcription factors


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