Gene annotation
Transcriptome id Sobic.003G197100.2,Sobic.003G197100.3
Synonym BGAL1, Sb03g025990
Functional annotation beta-galactosidase, putative, expressed
UniProt A0A1W0VY58 , A0A1W0VY46
Pfam PF02140 PF01301
Panther DB PTHR23421 PTHR23421:SF82
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G13750 : beta galactosidase 1
RAP-DB (Rice) LOC_Os01g39830.1 : beta-galactosidase, putative, expressed
MaizeGDB (Corn) Zm00025a028492 , Zm00025a000807 , Zm00025a053462 , Zm00025a034561 , Zm00025a029271
Brachypodium KQJ94047 , KQJ94046 , KQK08433
Barley HORVU3Hr1G050450.22 , HORVU3Hr1G050450.23 , HORVU3Hr1G050450.20 , HORVU3Hr1G050450.21 , HORVU3Hr1G050450.18 , HORVU6Hr1G039490.18 , HORVU6Hr1G039490.17 , HORVU6Hr1G039490.14 , HORVU6Hr1G039490.13 , HORVU6Hr1G039490.7 , HORVU6Hr1G039490.6 , HORVU6Hr1G039490.5 , HORVU6Hr1G039490.4 , HORVU6Hr1G039490.3 , HORVU6Hr1G039490.2 , HORVU6Hr1G039490.1 , HORVU6Hr1G039490.9 , HORVU6Hr1G039490.8 , HORVU3Hr1G050450.17 , HORVU3Hr1G050450.16 , HORVU3Hr1G050450.15 , HORVU3Hr1G050450.14 , HORVU3Hr1G050450.13 , HORVU3Hr1G050450.12 , HORVU3Hr1G050450.11 , HORVU3Hr1G050450.10 , HORVU3Hr1G050450.19 , HORVU3Hr1G050450.9 , HORVU3Hr1G050450.8 , HORVU3Hr1G050450.7 , HORVU3Hr1G050450.6 , HORVU3Hr1G050450.5 , HORVU3Hr1G050450.4 , HORVU3Hr1G050450.3 , HORVU3Hr1G050450.2 , HORVU3Hr1G050450.1
Wheat TraesCS3A02G208600 , TraesCS3B02G235100 , TraesCS3B02G235100 , TraesCS6A02G185400 , TraesCS6B02G214100 , TraesCS6B02G214100 , TraesCS6D02G172400 , TraesCS3D02G211500 , TraesCS3D02G211500 , TraesCS7A02G363600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G374400 -(PubMedID : 23108465)@"DEP2(Ortholog in rice:Li et al., 2010)"(PubMedID : 31659864)@expressed protein -
2 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
3 Sobic.001G349700 CPuORF35 - conserved peptide uORF-containing transcript, expressed -
4 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
5 Sobic.001G349650 - -
6 Sobic.005G064100 expressed protein -
7 Sobic.006G257200 kinesin motor domain containing protein, putative, expressed -
8 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
9 Sobic.010G165100 expressed protein -
10 Sobic.003G031700 protein kinase family protein, putative, expressed -
11 Sobic.002G362700 zinc finger family protein, putative, expressed -
12 Sobic.002G142500 expressed protein -
13 Sobic.004G344400 expressed protein -
14 Sobic.002G045200 protein kinase, putative, expressed -
15 Sobic.002G246000 expressed protein -
16 Sobic.001G371700 zinc finger protein, putative, expressed -
17 Sobic.004G243800 HEAT repeat family protein, putative, expressed -
18 Sobic.002G143200 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
19 Sobic.008G088842 - -
20 Sobic.009G167100 TBC domain containing protein, expressed -


Gene co-expression network
sample Sobic003G197100 Sobic003G197100 Sobic002G374400 Sobic002G374400 Sobic003G197100--Sobic002G374400 Sobic002G320600 Sobic002G320600 Sobic003G197100--Sobic002G320600 Sobic001G349700 Sobic001G349700 Sobic003G197100--Sobic001G349700 Sobic003G078300 Sobic003G078300 Sobic003G197100--Sobic003G078300 Sobic001G349650 Sobic001G349650 Sobic003G197100--Sobic001G349650 Sobic005G064100 Sobic005G064100 Sobic003G197100--Sobic005G064100 Sobic006G257200 Sobic006G257200 Sobic003G197100--Sobic006G257200 Sobic001G437500 Sobic001G437500 Sobic003G197100--Sobic001G437500 Sobic010G165100 Sobic010G165100 Sobic003G197100--Sobic010G165100 Sobic008G015200 Sobic008G015200 Sobic002G374400--Sobic008G015200 Sobic002G074000 Sobic002G074000 Sobic002G374400--Sobic002G074000 Sobic002G374400--Sobic003G197100 Sobic002G374400--Sobic002G320600 Sobic008G192700 Sobic008G192700 Sobic002G374400--Sobic008G192700 Sobic002G374400--Sobic001G349700 Sobic009G167100 Sobic009G167100 Sobic002G374400--Sobic009G167100 Sobic006G179300 Sobic006G179300 Sobic002G374400--Sobic006G179300 Sobic002G143200 Sobic002G143200 Sobic002G374400--Sobic002G143200 Sobic003G031700 Sobic003G031700 Sobic002G320600--Sobic003G031700 Sobic001G201000 Sobic001G201000 Sobic002G320600--Sobic001G201000 Sobic003G420300 Sobic003G420300 Sobic002G320600--Sobic003G420300 Sobic003G292700 Sobic003G292700 Sobic002G320600--Sobic003G292700 Sobic010G211800 Sobic010G211800 Sobic002G320600--Sobic010G211800 Sobic002G362700 Sobic002G362700 Sobic002G320600--Sobic002G362700 Sobic003G226700 Sobic003G226700 Sobic002G320600--Sobic003G226700 Sobic008G127550 Sobic008G127550 Sobic002G320600--Sobic008G127550 Sobic004G328300 Sobic004G328300 Sobic002G320600--Sobic004G328300 Sobic001G349700--Sobic001G349650 Sobic001G349700--Sobic002G374400 Sobic001G349700--Sobic003G197100 Sobic002G161700 Sobic002G161700 Sobic001G349700--Sobic002G161700 Sobic002G214700 Sobic002G214700 Sobic001G349700--Sobic002G214700 Sobic007G166800 Sobic007G166800 Sobic001G349700--Sobic007G166800 Sobic003G231100 Sobic003G231100 Sobic001G349700--Sobic003G231100 Sobic006G188800 Sobic006G188800 Sobic001G349700--Sobic006G188800 Sobic001G349700--Sobic008G015200 Sobic002G311000 Sobic002G311000 Sobic003G078300--Sobic002G311000 Sobic004G253500 Sobic004G253500 Sobic003G078300--Sobic004G253500 Sobic001G461800 Sobic001G461800 Sobic003G078300--Sobic001G461800 Sobic001G389600 Sobic001G389600 Sobic003G078300--Sobic001G389600 Sobic003G078300--Sobic006G257200 Sobic003G291000 Sobic003G291000 Sobic003G078300--Sobic003G291000 Sobic002G045200 Sobic002G045200 Sobic003G078300--Sobic002G045200 Sobic003G250000 Sobic003G250000 Sobic003G078300--Sobic003G250000 Sobic003G078300--Sobic002G362700 Sobic001G349650--Sobic001G349700 Sobic001G349650--Sobic003G197100 Sobic002G283500 Sobic002G283500 Sobic001G349650--Sobic002G283500 Sobic001G382700 Sobic001G382700 Sobic001G349650--Sobic001G382700 Sobic003G052100 Sobic003G052100 Sobic001G349650--Sobic003G052100 Sobic003G296500 Sobic003G296500 Sobic001G349650--Sobic003G296500 Sobic003G118100 Sobic003G118100 Sobic001G349650--Sobic003G118100 Sobic002G016400 Sobic002G016400 Sobic001G349650--Sobic002G016400 Sobic001G402400 Sobic001G402400 Sobic001G349650--Sobic001G402400 Sobic003G298900 Sobic003G298900 Sobic005G064100--Sobic003G298900 Sobic008G174966 Sobic008G174966 Sobic005G064100--Sobic008G174966 Sobic001G507200 Sobic001G507200 Sobic005G064100--Sobic001G507200 Sobic005G064100--Sobic001G437500 Sobic003G409600 Sobic003G409600 Sobic005G064100--Sobic003G409600 Sobic004G093400 Sobic004G093400 Sobic005G064100--Sobic004G093400 Sobic005G064100--Sobic002G320600 Sobic006G071628 Sobic006G071628 Sobic005G064100--Sobic006G071628 Sobic009G061000 Sobic009G061000 Sobic005G064100--Sobic009G061000 Sobic002G142500 Sobic002G142500 Sobic006G257200--Sobic002G142500 Sobic006G241800 Sobic006G241800 Sobic006G257200--Sobic006G241800 Sobic006G257200--Sobic002G362700 Sobic002G293700 Sobic002G293700 Sobic006G257200--Sobic002G293700 Sobic006G257200--Sobic003G078300 Sobic001G425700 Sobic001G425700 Sobic006G257200--Sobic001G425700 Sobic002G001100 Sobic002G001100 Sobic006G257200--Sobic002G001100 Sobic004G164700 Sobic004G164700 Sobic006G257200--Sobic004G164700 Sobic010G135300 Sobic010G135300 Sobic006G257200--Sobic010G135300 Sobic001G196000 Sobic001G196000 Sobic001G437500--Sobic001G196000 Sobic004G243800 Sobic004G243800 Sobic001G437500--Sobic004G243800 Sobic004G274800 Sobic004G274800 Sobic001G437500--Sobic004G274800 Sobic009G206500 Sobic009G206500 Sobic001G437500--Sobic009G206500 Sobic007G139500 Sobic007G139500 Sobic001G437500--Sobic007G139500 Sobic001G159800 Sobic001G159800 Sobic001G437500--Sobic001G159800 Sobic001G437500--Sobic009G061000 Sobic006G267500 Sobic006G267500 Sobic001G437500--Sobic006G267500 Sobic002G276600 Sobic002G276600 Sobic001G437500--Sobic002G276600 Sobic002G246000 Sobic002G246000 Sobic010G165100--Sobic002G246000 Sobic010G165100--Sobic001G389600 Sobic010G165100--Sobic002G142500 Sobic010G165100--Sobic002G045200 Sobic006G274866 Sobic006G274866 Sobic010G165100--Sobic006G274866 Sobic002G403000 Sobic002G403000 Sobic010G165100--Sobic002G403000 Sobic006G032800 Sobic006G032800 Sobic010G165100--Sobic006G032800 Sobic010G165100--Sobic002G311000 Sobic010G165100--Sobic004G243800
Octagon: transcription factors


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