Gene annotation
Transcriptome id Sobic.008G088842.1
Synonym -
Functional annotation -
UniProt C6JRN3 , C6JRN5 , A0A109NDP3
Pfam PF02375 PF02373
Panther DB PTHR10694 PTHR10694:SF50
NCBI CDD KOG3576; Ovo and related transcription factors
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48430 : relative of early flowering 6
RAP-DB (Rice) LOC_Os12g18150.1 : ZOS12-04 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a054251
Brachypodium PNT65231 , KQK23623 , PNT78184 , KQJ91681
Barley -
Wheat TraesCS4A02G416800 , TraesCS5B02G110600 , TraesCS5A02G109400 , TraesCS5D02G124200 , TraesCS5D02G124200 , TraesCS4D02G314000 , TraesCS4B02G317400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G138900 cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed K11991: tRNA(adenine34) deaminase
2 Sobic.006G140600 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
3 Sobic.002G143200 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
4 Sobic.010G262100 expressed protein -
5 Sobic.003G311600 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
6 Sobic.001G451300 NUP155, putative, expressed K14312: NUP155, NUP170, nuclear pore complex protein Nup155
7 Sobic.006G280100 SET domain containing protein, expressed -
8 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88
9 Sobic.002G340200 expressed protein -
10 Sobic.002G425200 expressed protein -
11 Sobic.001G143600 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
12 Sobic.002G051800 BTBT2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
13 Sobic.003G435500 expressed protein -
14 Sobic.001G482200 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
15 Sobic.002G162500 - -
16 Sobic.004G354000 OsSigP1 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed -
17 Sobic.008G017100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
18 Sobic.006G137600 AT hook motif family protein, expressed -
19 Sobic.001G385400 guanine nucleotide exchange factor, putative, expressed -
20 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT


Gene co-expression network
sample Sobic008G088842 Sobic008G088842 Sobic010G138900 Sobic010G138900 Sobic008G088842--Sobic010G138900 Sobic006G140600 Sobic006G140600 Sobic008G088842--Sobic006G140600 Sobic002G143200 Sobic002G143200 Sobic008G088842--Sobic002G143200 Sobic010G262100 Sobic010G262100 Sobic008G088842--Sobic010G262100 Sobic003G311600 Sobic003G311600 Sobic008G088842--Sobic003G311600 Sobic001G451300 Sobic001G451300 Sobic008G088842--Sobic001G451300 Sobic006G280100 Sobic006G280100 Sobic008G088842--Sobic006G280100 Sobic006G208400 Sobic006G208400 Sobic008G088842--Sobic006G208400 Sobic002G340200 Sobic002G340200 Sobic008G088842--Sobic002G340200 Sobic010G138900--Sobic008G088842 Sobic010G138900--Sobic010G262100 Sobic010G138900--Sobic001G451300 Sobic009G142000 Sobic009G142000 Sobic010G138900--Sobic009G142000 Sobic001G453000 Sobic001G453000 Sobic010G138900--Sobic001G453000 Sobic003G435500 Sobic003G435500 Sobic010G138900--Sobic003G435500 Sobic003G250900 Sobic003G250900 Sobic010G138900--Sobic003G250900 Sobic004G034700 Sobic004G034700 Sobic010G138900--Sobic004G034700 Sobic002G043100 Sobic002G043100 Sobic010G138900--Sobic002G043100 Sobic006G140600--Sobic008G088842 Sobic006G140600--Sobic002G143200 Sobic001G385400 Sobic001G385400 Sobic006G140600--Sobic001G385400 Sobic006G140600--Sobic010G138900 Sobic006G140600--Sobic006G208400 Sobic001G315400 Sobic001G315400 Sobic006G140600--Sobic001G315400 Sobic006G140600--Sobic003G435500 Sobic004G178400 Sobic004G178400 Sobic006G140600--Sobic004G178400 Sobic006G033101 Sobic006G033101 Sobic006G140600--Sobic006G033101 Sobic002G143200--Sobic001G385400 Sobic002G143200--Sobic006G140600 Sobic002G143200--Sobic008G088842 Sobic002G098500 Sobic002G098500 Sobic002G143200--Sobic002G098500 Sobic008G015200 Sobic008G015200 Sobic002G143200--Sobic008G015200 Sobic002G143200--Sobic003G435500 Sobic001G367100 Sobic001G367100 Sobic002G143200--Sobic001G367100 Sobic004G341700 Sobic004G341700 Sobic002G143200--Sobic004G341700 Sobic008G192700 Sobic008G192700 Sobic002G143200--Sobic008G192700 Sobic010G262100--Sobic001G451300 Sobic010G262100--Sobic010G138900 Sobic001G248100 Sobic001G248100 Sobic010G262100--Sobic001G248100 Sobic008G080500 Sobic008G080500 Sobic010G262100--Sobic008G080500 Sobic010G262100--Sobic002G043100 Sobic002G399800 Sobic002G399800 Sobic010G262100--Sobic002G399800 Sobic002G371600 Sobic002G371600 Sobic010G262100--Sobic002G371600 Sobic003G314700 Sobic003G314700 Sobic010G262100--Sobic003G314700 Sobic008G092800 Sobic008G092800 Sobic010G262100--Sobic008G092800 Sobic007G070000 Sobic007G070000 Sobic003G311600--Sobic007G070000 Sobic003G311600--Sobic008G088842 Sobic003G104100 Sobic003G104100 Sobic003G311600--Sobic003G104100 Sobic001G165801 Sobic001G165801 Sobic003G311600--Sobic001G165801 Sobic006G236000 Sobic006G236000 Sobic003G311600--Sobic006G236000 Sobic003G311600--Sobic002G340200 Sobic007G094500 Sobic007G094500 Sobic003G311600--Sobic007G094500 Sobic003G135500 Sobic003G135500 Sobic003G311600--Sobic003G135500 Sobic002G162500 Sobic002G162500 Sobic003G311600--Sobic002G162500 Sobic001G451300--Sobic010G262100 Sobic001G451300--Sobic004G034700 Sobic001G451300--Sobic010G138900 Sobic001G451300--Sobic002G043100 Sobic003G309050 Sobic003G309050 Sobic001G451300--Sobic003G309050 Sobic010G174700 Sobic010G174700 Sobic001G451300--Sobic010G174700 Sobic001G451300--Sobic002G371600 Sobic001G451300--Sobic009G142000 Sobic001G451300--Sobic002G399800 Sobic009G190200 Sobic009G190200 Sobic006G280100--Sobic009G190200 Sobic002G219900 Sobic002G219900 Sobic006G280100--Sobic002G219900 Sobic004G043750 Sobic004G043750 Sobic006G280100--Sobic004G043750 Sobic004G038100 Sobic004G038100 Sobic006G280100--Sobic004G038100 Sobic007G159200 Sobic007G159200 Sobic006G280100--Sobic007G159200 Sobic006G280100--Sobic003G135500 Sobic007G125700 Sobic007G125700 Sobic006G280100--Sobic007G125700 Sobic002G079100 Sobic002G079100 Sobic006G280100--Sobic002G079100 Sobic006G280100--Sobic008G080500 Sobic004G354000 Sobic004G354000 Sobic006G208400--Sobic004G354000 Sobic010G236600 Sobic010G236600 Sobic006G208400--Sobic010G236600 Sobic008G017100 Sobic008G017100 Sobic006G208400--Sobic008G017100 Sobic010G224700 Sobic010G224700 Sobic006G208400--Sobic010G224700 Sobic001G408300 Sobic001G408300 Sobic006G208400--Sobic001G408300 Sobic001G460500 Sobic001G460500 Sobic006G208400--Sobic001G460500 Sobic002G423400 Sobic002G423400 Sobic006G208400--Sobic002G423400 Sobic002G427300 Sobic002G427300 Sobic006G208400--Sobic002G427300 Sobic006G208400--Sobic003G314700 Sobic002G340200--Sobic007G070000 Sobic002G340200--Sobic008G088842 Sobic002G340200--Sobic002G162500 Sobic002G340200--Sobic003G311600 Sobic010G089800 Sobic010G089800 Sobic002G340200--Sobic010G089800 Sobic002G051800 Sobic002G051800 Sobic002G340200--Sobic002G051800 Sobic001G300900 Sobic001G300900 Sobic002G340200--Sobic001G300900 Sobic002G340200--Sobic007G159200 Sobic002G340200--Sobic010G138900
Octagon: transcription factors


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