Gene annotation
Transcriptome id Sobic.003G311600.1
Synonym Sb03g035970
Functional annotation periplasmic beta-glucosidase precursor, putative, expressed
UniProt C5XLK0
Pfam PF01915 PF00933
Panther DB PTHR30620 PTHR30620:SF43
NCBI CDD -
KEGG Orthology K05349; beta-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G04885 : Glycosyl hydrolase family protein
RAP-DB (Rice) LOC_Os01g56510.1 : periplasmic beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a027379
Brachypodium KQK09973
Barley HORVU3Hr1G075310.9 , HORVU3Hr1G075310.8 , HORVU3Hr1G075310.1 , HORVU3Hr1G075310.3 , HORVU3Hr1G075310.2 , HORVU3Hr1G075310.5 , HORVU3Hr1G075310.4 , HORVU3Hr1G075310.7 , HORVU3Hr1G075310.6 , HORVU3Hr1G075310.11 , HORVU3Hr1G075310.10
Wheat TraesCS3A02G295500 , TraesCS3D02G307600 , TraesCS3B02G341500
Populus PNT21537 , PNT21539 , PNT21538 , PNT06860 , PNT06861 , PNT21540


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G070000 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
2 Sobic.008G088842 - -
3 Sobic.003G104100 expressed protein -
4 Sobic.001G165801 - -
5 Sobic.006G236000 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
6 Sobic.002G340200 expressed protein -
7 Sobic.007G094500 KH domain containing protein, putative, expressed -
8 Sobic.003G135500 sugar transporter superfamily, putative, expressed -
9 Sobic.002G162500 - -
10 Sobic.005G078200 OsFBX400 - F-box domain containing protein, expressed -
11 Sobic.003G341700 exo70 exocyst complex subunit domain containing protein, expressed -
12 Sobic.004G354000 OsSigP1 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed -
13 Sobic.002G272400 expressed protein -
14 Sobic.003G177000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
15 Sobic.001G395200 cyclin-related protein, putative, expressed -
16 Sobic.007G132200 DNA-repair protein complementing XP-C cells, putative, expressed K10838: xeroderma pigmentosum group C-complementing protein
17 Sobic.008G101900 plastid division regulator MinE, putative, expressed -
18 Sobic.006G275000 tubulin/FtsZ domain containing protein, putative, expressed K03531: cell division protein FtsZ
19 Sobic.004G269100 ATROPGEF7/ROPGEF7, putative, expressed -
20 Sobic.003G223000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic003G311600 Sobic003G311600 Sobic007G070000 Sobic007G070000 Sobic003G311600--Sobic007G070000 Sobic008G088842 Sobic008G088842 Sobic003G311600--Sobic008G088842 Sobic003G104100 Sobic003G104100 Sobic003G311600--Sobic003G104100 Sobic001G165801 Sobic001G165801 Sobic003G311600--Sobic001G165801 Sobic006G236000 Sobic006G236000 Sobic003G311600--Sobic006G236000 Sobic002G340200 Sobic002G340200 Sobic003G311600--Sobic002G340200 Sobic007G094500 Sobic007G094500 Sobic003G311600--Sobic007G094500 Sobic003G135500 Sobic003G135500 Sobic003G311600--Sobic003G135500 Sobic002G162500 Sobic002G162500 Sobic003G311600--Sobic002G162500 Sobic007G070000--Sobic003G311600 Sobic007G070000--Sobic002G340200 Sobic010G134500 Sobic010G134500 Sobic007G070000--Sobic010G134500 Sobic007G070000--Sobic008G088842 Sobic003G223000 Sobic003G223000 Sobic007G070000--Sobic003G223000 Sobic001G300900 Sobic001G300900 Sobic007G070000--Sobic001G300900 Sobic010G091200 Sobic010G091200 Sobic007G070000--Sobic010G091200 Sobic004G354000 Sobic004G354000 Sobic007G070000--Sobic004G354000 Sobic006G275000 Sobic006G275000 Sobic007G070000--Sobic006G275000 Sobic010G138900 Sobic010G138900 Sobic008G088842--Sobic010G138900 Sobic006G140600 Sobic006G140600 Sobic008G088842--Sobic006G140600 Sobic002G143200 Sobic002G143200 Sobic008G088842--Sobic002G143200 Sobic010G262100 Sobic010G262100 Sobic008G088842--Sobic010G262100 Sobic008G088842--Sobic003G311600 Sobic001G451300 Sobic001G451300 Sobic008G088842--Sobic001G451300 Sobic006G280100 Sobic006G280100 Sobic008G088842--Sobic006G280100 Sobic006G208400 Sobic006G208400 Sobic008G088842--Sobic006G208400 Sobic008G088842--Sobic002G340200 Sobic001G395200 Sobic001G395200 Sobic003G104100--Sobic001G395200 Sobic008G052300 Sobic008G052300 Sobic003G104100--Sobic008G052300 Sobic005G163400 Sobic005G163400 Sobic003G104100--Sobic005G163400 Sobic001G425700 Sobic001G425700 Sobic003G104100--Sobic001G425700 Sobic006G067700 Sobic006G067700 Sobic003G104100--Sobic006G067700 Sobic010G024500 Sobic010G024500 Sobic003G104100--Sobic010G024500 Sobic004G179800 Sobic004G179800 Sobic003G104100--Sobic004G179800 Sobic006G084300 Sobic006G084300 Sobic003G104100--Sobic006G084300 Sobic009G259900 Sobic009G259900 Sobic003G104100--Sobic009G259900 Sobic001G165801--Sobic003G223000 Sobic001G165801--Sobic003G311600 Sobic003G333700 Sobic003G333700 Sobic001G165801--Sobic003G333700 Sobic001G013900 Sobic001G013900 Sobic001G165801--Sobic001G013900 Sobic003G336500 Sobic003G336500 Sobic001G165801--Sobic003G336500 Sobic007G225700 Sobic007G225700 Sobic001G165801--Sobic007G225700 Sobic001G165801--Sobic007G070000 Sobic001G290600 Sobic001G290600 Sobic001G165801--Sobic001G290600 Sobic008G100400 Sobic008G100400 Sobic001G165801--Sobic008G100400 Sobic004G215900 Sobic004G215900 Sobic006G236000--Sobic004G215900 Sobic008G068100 Sobic008G068100 Sobic006G236000--Sobic008G068100 Sobic003G123100 Sobic003G123100 Sobic006G236000--Sobic003G123100 Sobic002G043000 Sobic002G043000 Sobic006G236000--Sobic002G043000 Sobic006G112700 Sobic006G112700 Sobic006G236000--Sobic006G112700 Sobic006G181800 Sobic006G181800 Sobic006G236000--Sobic006G181800 Sobic009G191500 Sobic009G191500 Sobic006G236000--Sobic009G191500 Sobic002G003300 Sobic002G003300 Sobic006G236000--Sobic002G003300 Sobic008G111600 Sobic008G111600 Sobic006G236000--Sobic008G111600 Sobic002G340200--Sobic007G070000 Sobic002G340200--Sobic008G088842 Sobic002G340200--Sobic002G162500 Sobic002G340200--Sobic003G311600 Sobic010G089800 Sobic010G089800 Sobic002G340200--Sobic010G089800 Sobic002G051800 Sobic002G051800 Sobic002G340200--Sobic002G051800 Sobic002G340200--Sobic001G300900 Sobic007G159200 Sobic007G159200 Sobic002G340200--Sobic007G159200 Sobic002G340200--Sobic010G138900 Sobic004G119400 Sobic004G119400 Sobic007G094500--Sobic004G119400 Sobic008G017100 Sobic008G017100 Sobic007G094500--Sobic008G017100 Sobic007G094500--Sobic004G354000 Sobic002G380100 Sobic002G380100 Sobic007G094500--Sobic002G380100 Sobic002G079100 Sobic002G079100 Sobic007G094500--Sobic002G079100 Sobic010G224700 Sobic010G224700 Sobic007G094500--Sobic010G224700 Sobic006G245900 Sobic006G245900 Sobic007G094500--Sobic006G245900 Sobic002G431400 Sobic002G431400 Sobic007G094500--Sobic002G431400 Sobic002G048700 Sobic002G048700 Sobic007G094500--Sobic002G048700 Sobic003G135500--Sobic006G280100 Sobic003G431600 Sobic003G431600 Sobic003G135500--Sobic003G431600 Sobic003G299500 Sobic003G299500 Sobic003G135500--Sobic003G299500 Sobic003G135500--Sobic006G181800 Sobic009G120400 Sobic009G120400 Sobic003G135500--Sobic009G120400 Sobic003G360300 Sobic003G360300 Sobic003G135500--Sobic003G360300 Sobic008G080500 Sobic008G080500 Sobic003G135500--Sobic008G080500 Sobic008G092800 Sobic008G092800 Sobic003G135500--Sobic008G092800 Sobic003G135500--Sobic002G079100 Sobic001G258900 Sobic001G258900 Sobic002G162500--Sobic001G258900 Sobic002G162500--Sobic001G300900 Sobic003G341700 Sobic003G341700 Sobic002G162500--Sobic003G341700 Sobic002G162500--Sobic008G088842 Sobic002G162500--Sobic002G340200 Sobic004G135900 Sobic004G135900 Sobic002G162500--Sobic004G135900 Sobic010G172000 Sobic010G172000 Sobic002G162500--Sobic010G172000 Sobic009G107080 Sobic009G107080 Sobic002G162500--Sobic009G107080 Sobic006G063001 Sobic006G063001 Sobic002G162500--Sobic006G063001
Octagon: transcription factors


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