Gene annotation
Transcriptome id Sobic.008G101900.1
Synonym Sb08g015430, ARC12, ATMINE1, MINE1
Functional annotation plastid division regulator MinE, putative, expressed
UniProt C5YNV6
Pfam PF03776
Panther DB PTHR33404 PTHR33404:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G69390 : homologue of bacterial MinE 1
RAP-DB (Rice) LOC_Os12g31450.1 : plastid division regulator MinE, putative, expressed
MaizeGDB (Corn) Zm00025a054229
Brachypodium KQJ86662
Barley -
Wheat TraesCS5A02G107500 , TraesCS5D02G117000 , TraesCS5B02G114800
Populus -


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cDNA sequences
Sobic.008G101900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G274100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
2 Sobic.008G058000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynamin family protein, putative, expressed -
3 Sobic.003G223000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.006G193500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G371700 zinc finger protein, putative, expressed -
6 Sobic.001G395200 cyclin-related protein, putative, expressed -
7 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
8 Sobic.002G272400 expressed protein -
9 Sobic.004G354000 OsSigP1 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed -
10 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
11 Sobic.003G104100 expressed protein -
12 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
13 Sobic.003G360300 exostosin family domain containing protein, expressed -
14 Sobic.009G177200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
15 Sobic.006G257200 kinesin motor domain containing protein, putative, expressed -
16 Sobic.004G118800 receptor lectin kinase like protein, putative, expressed -
17 Sobic.002G354700 zinc finger family protein, putative, expressed -
18 Sobic.002G356600 ZCW7, putative, expressed -
19 Sobic.005G078200 OsFBX400 - F-box domain containing protein, expressed -
20 Sobic.009G148200 deoxynucleoside kinase family, putative, expressed -


Gene co-expression network
sample Sobic008G101900 Sobic008G101900 Sobic006G274100 Sobic006G274100 Sobic008G101900--Sobic006G274100 Sobic008G058000 Sobic008G058000 Sobic008G101900--Sobic008G058000 Sobic003G223000 Sobic003G223000 Sobic008G101900--Sobic003G223000 Sobic006G193500 Sobic006G193500 Sobic008G101900--Sobic006G193500 Sobic001G371700 Sobic001G371700 Sobic008G101900--Sobic001G371700 Sobic001G395200 Sobic001G395200 Sobic008G101900--Sobic001G395200 Sobic001G199500 Sobic001G199500 Sobic008G101900--Sobic001G199500 Sobic002G272400 Sobic002G272400 Sobic008G101900--Sobic002G272400 Sobic004G354000 Sobic004G354000 Sobic008G101900--Sobic004G354000 Sobic006G274100--Sobic008G101900 Sobic006G140400 Sobic006G140400 Sobic006G274100--Sobic006G140400 Sobic010G032300 Sobic010G032300 Sobic006G274100--Sobic010G032300 Sobic002G380100 Sobic002G380100 Sobic006G274100--Sobic002G380100 Sobic006G274100--Sobic004G354000 Sobic004G119400 Sobic004G119400 Sobic006G274100--Sobic004G119400 Sobic004G027400 Sobic004G027400 Sobic006G274100--Sobic004G027400 Sobic003G259600 Sobic003G259600 Sobic006G274100--Sobic003G259600 Sobic009G066400 Sobic009G066400 Sobic006G274100--Sobic009G066400 Sobic008G058000--Sobic008G101900 Sobic001G013900 Sobic001G013900 Sobic008G058000--Sobic001G013900 Sobic008G058000--Sobic002G272400 Sobic008G058000--Sobic001G371700 Sobic008G058000--Sobic003G223000 Sobic010G099300 Sobic010G099300 Sobic008G058000--Sobic010G099300 Sobic002G078000 Sobic002G078000 Sobic008G058000--Sobic002G078000 Sobic008G058000--Sobic006G193500 Sobic008G125100 Sobic008G125100 Sobic008G058000--Sobic008G125100 Sobic003G333700 Sobic003G333700 Sobic003G223000--Sobic003G333700 Sobic003G223000--Sobic002G078000 Sobic003G223000--Sobic008G101900 Sobic009G002900 Sobic009G002900 Sobic003G223000--Sobic009G002900 Sobic009G177200 Sobic009G177200 Sobic003G223000--Sobic009G177200 Sobic009G231100 Sobic009G231100 Sobic003G223000--Sobic009G231100 Sobic001G165801 Sobic001G165801 Sobic003G223000--Sobic001G165801 Sobic001G104300 Sobic001G104300 Sobic003G223000--Sobic001G104300 Sobic003G223000--Sobic002G272400 Sobic002G155100 Sobic002G155100 Sobic006G193500--Sobic002G155100 Sobic006G193500--Sobic008G101900 Sobic006G193500--Sobic001G199500 Sobic003G102700 Sobic003G102700 Sobic006G193500--Sobic003G102700 Sobic010G141600 Sobic010G141600 Sobic006G193500--Sobic010G141600 Sobic006G193500--Sobic003G223000 Sobic005G013300 Sobic005G013300 Sobic006G193500--Sobic005G013300 Sobic006G084300 Sobic006G084300 Sobic006G193500--Sobic006G084300 Sobic001G425700 Sobic001G425700 Sobic006G193500--Sobic001G425700 Sobic002G377300 Sobic002G377300 Sobic001G371700--Sobic002G377300 Sobic004G118800 Sobic004G118800 Sobic001G371700--Sobic004G118800 Sobic003G078300 Sobic003G078300 Sobic001G371700--Sobic003G078300 Sobic001G371700--Sobic008G101900 Sobic006G257200 Sobic006G257200 Sobic001G371700--Sobic006G257200 Sobic001G047200 Sobic001G047200 Sobic001G371700--Sobic001G047200 Sobic001G371700--Sobic002G272400 Sobic002G311000 Sobic002G311000 Sobic001G371700--Sobic002G311000 Sobic001G371700--Sobic003G223000 Sobic003G104100 Sobic003G104100 Sobic001G395200--Sobic003G104100 Sobic009G259900 Sobic009G259900 Sobic001G395200--Sobic009G259900 Sobic002G219900 Sobic002G219900 Sobic001G395200--Sobic002G219900 Sobic010G149600 Sobic010G149600 Sobic001G395200--Sobic010G149600 Sobic003G351900 Sobic003G351900 Sobic001G395200--Sobic003G351900 Sobic006G008300 Sobic006G008300 Sobic001G395200--Sobic006G008300 Sobic007G125700 Sobic007G125700 Sobic001G395200--Sobic007G125700 Sobic004G043750 Sobic004G043750 Sobic001G395200--Sobic004G043750 Sobic001G079900 Sobic001G079900 Sobic001G395200--Sobic001G079900 Sobic005G088900 Sobic005G088900 Sobic001G199500--Sobic005G088900 Sobic001G199500--Sobic003G102700 Sobic001G199500--Sobic006G084300 Sobic003G024000 Sobic003G024000 Sobic001G199500--Sobic003G024000 Sobic006G281900 Sobic006G281900 Sobic001G199500--Sobic006G281900 Sobic009G188900 Sobic009G188900 Sobic001G199500--Sobic009G188900 Sobic007G006800 Sobic007G006800 Sobic001G199500--Sobic007G006800 Sobic006G071628 Sobic006G071628 Sobic001G199500--Sobic006G071628 Sobic003G144000 Sobic003G144000 Sobic001G199500--Sobic003G144000 Sobic002G141900 Sobic002G141900 Sobic002G272400--Sobic002G141900 Sobic002G272400--Sobic001G013900 Sobic002G272400--Sobic008G101900 Sobic002G272400--Sobic003G223000 Sobic002G272400--Sobic008G058000 Sobic002G272400--Sobic001G371700 Sobic002G272400--Sobic004G119400 Sobic001G315400 Sobic001G315400 Sobic002G272400--Sobic001G315400 Sobic010G157700 Sobic010G157700 Sobic002G272400--Sobic010G157700 Sobic006G208400 Sobic006G208400 Sobic004G354000--Sobic006G208400 Sobic004G342300 Sobic004G342300 Sobic004G354000--Sobic004G342300 Sobic008G017100 Sobic008G017100 Sobic004G354000--Sobic008G017100 Sobic002G356600 Sobic002G356600 Sobic004G354000--Sobic002G356600 Sobic001G322600 Sobic001G322600 Sobic004G354000--Sobic001G322600 Sobic002G079100 Sobic002G079100 Sobic004G354000--Sobic002G079100 Sobic004G356200 Sobic004G356200 Sobic004G354000--Sobic004G356200 Sobic001G027100 Sobic001G027100 Sobic004G354000--Sobic001G027100 Sobic006G236000 Sobic006G236000 Sobic004G354000--Sobic006G236000
Octagon: transcription factors


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