Gene annotation
Transcriptome id Sobic.004G118800.1
Synonym Sb04g009910
Functional annotation receptor lectin kinase like protein, putative, expressed
UniProt C5XZK9
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF5
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G55830 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os02g26160.2 : receptor lectin kinase like protein, putative, expressed
MaizeGDB (Corn) Zm00025a019704
Brachypodium PNT71059 , PNT71060 , KQK05760
Barley HORVU1Hr1G070040.1 , HORVU1Hr1G070040.2 , HORVU1Hr1G070040.3 , HORVU1Hr1G070040.4
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G371700 zinc finger protein, putative, expressed -
2 Sobic.008G101900 plastid division regulator MinE, putative, expressed -
3 Sobic.002G001100 legume lectins beta domain containing protein, putative, expressed -
4 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
5 Sobic.003G177000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
6 Sobic.008G078000 EDM2, putative, expressed -
7 Sobic.005G017000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase APK1B, chloroplast precursor, putative, expressed -
8 Sobic.001G298800 ternary complex factor MIP1, putative, expressed -
9 Sobic.002G425200 expressed protein -
10 Sobic.009G231100 3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed K00979: 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
11 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
12 Sobic.004G027000 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
13 Sobic.003G207300 OsFBD3 - F-box and FBD domain containing protein, expressed -
14 Sobic.003G027800 protein kinase family protein, putative, expressed -
15 Sobic.007G128100 expressed protein -
16 Sobic.006G257200 kinesin motor domain containing protein, putative, expressed -
17 Sobic.008G058000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynamin family protein, putative, expressed -
18 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
19 Sobic.003G360300 exostosin family domain containing protein, expressed -
20 Sobic.003G288401 - -


Gene co-expression network
sample Sobic004G118800 Sobic004G118800 Sobic001G371700 Sobic001G371700 Sobic004G118800--Sobic001G371700 Sobic008G101900 Sobic008G101900 Sobic004G118800--Sobic008G101900 Sobic002G001100 Sobic002G001100 Sobic004G118800--Sobic002G001100 Sobic008G038200 Sobic008G038200 Sobic004G118800--Sobic008G038200 Sobic003G177000 Sobic003G177000 Sobic004G118800--Sobic003G177000 Sobic008G078000 Sobic008G078000 Sobic004G118800--Sobic008G078000 Sobic005G017000 Sobic005G017000 Sobic004G118800--Sobic005G017000 Sobic001G298800 Sobic001G298800 Sobic004G118800--Sobic001G298800 Sobic002G425200 Sobic002G425200 Sobic004G118800--Sobic002G425200 Sobic002G377300 Sobic002G377300 Sobic001G371700--Sobic002G377300 Sobic001G371700--Sobic004G118800 Sobic003G078300 Sobic003G078300 Sobic001G371700--Sobic003G078300 Sobic001G371700--Sobic008G101900 Sobic006G257200 Sobic006G257200 Sobic001G371700--Sobic006G257200 Sobic001G047200 Sobic001G047200 Sobic001G371700--Sobic001G047200 Sobic002G272400 Sobic002G272400 Sobic001G371700--Sobic002G272400 Sobic002G311000 Sobic002G311000 Sobic001G371700--Sobic002G311000 Sobic003G223000 Sobic003G223000 Sobic001G371700--Sobic003G223000 Sobic006G274100 Sobic006G274100 Sobic008G101900--Sobic006G274100 Sobic008G058000 Sobic008G058000 Sobic008G101900--Sobic008G058000 Sobic008G101900--Sobic003G223000 Sobic006G193500 Sobic006G193500 Sobic008G101900--Sobic006G193500 Sobic008G101900--Sobic001G371700 Sobic001G395200 Sobic001G395200 Sobic008G101900--Sobic001G395200 Sobic001G199500 Sobic001G199500 Sobic008G101900--Sobic001G199500 Sobic008G101900--Sobic002G272400 Sobic004G354000 Sobic004G354000 Sobic008G101900--Sobic004G354000 Sobic005G015300 Sobic005G015300 Sobic002G001100--Sobic005G015300 Sobic002G001100--Sobic006G257200 Sobic006G241800 Sobic006G241800 Sobic002G001100--Sobic006G241800 Sobic001G074100 Sobic001G074100 Sobic002G001100--Sobic001G074100 Sobic002G370400 Sobic002G370400 Sobic002G001100--Sobic002G370400 Sobic002G001100--Sobic002G311000 Sobic003G031700 Sobic003G031700 Sobic002G001100--Sobic003G031700 Sobic010G024500 Sobic010G024500 Sobic002G001100--Sobic010G024500 Sobic010G211800 Sobic010G211800 Sobic002G001100--Sobic010G211800 Sobic007G065300 Sobic007G065300 Sobic008G038200--Sobic007G065300 Sobic002G098500 Sobic002G098500 Sobic008G038200--Sobic002G098500 Sobic008G038200--Sobic001G298800 Sobic003G096300 Sobic003G096300 Sobic008G038200--Sobic003G096300 Sobic001G518000 Sobic001G518000 Sobic008G038200--Sobic001G518000 Sobic008G038200--Sobic006G241800 Sobic008G038200--Sobic003G177000 Sobic010G135300 Sobic010G135300 Sobic008G038200--Sobic010G135300 Sobic007G128100 Sobic007G128100 Sobic008G038200--Sobic007G128100 Sobic003G177000--Sobic002G425200 Sobic003G177000--Sobic008G038200 Sobic001G300000 Sobic001G300000 Sobic003G177000--Sobic001G300000 Sobic001G541000 Sobic001G541000 Sobic003G177000--Sobic001G541000 Sobic007G161600 Sobic007G161600 Sobic003G177000--Sobic007G161600 Sobic006G280100 Sobic006G280100 Sobic003G177000--Sobic006G280100 Sobic001G523700 Sobic001G523700 Sobic003G177000--Sobic001G523700 Sobic007G159200 Sobic007G159200 Sobic003G177000--Sobic007G159200 Sobic008G045000 Sobic008G045000 Sobic003G177000--Sobic008G045000 Sobic001G465500 Sobic001G465500 Sobic008G078000--Sobic001G465500 Sobic008G078000--Sobic005G017000 Sobic003G331000 Sobic003G331000 Sobic008G078000--Sobic003G331000 Sobic003G343200 Sobic003G343200 Sobic008G078000--Sobic003G343200 Sobic005G160200 Sobic005G160200 Sobic008G078000--Sobic005G160200 Sobic002G123600 Sobic002G123600 Sobic008G078000--Sobic002G123600 Sobic008G078000--Sobic004G118800 Sobic010G222800 Sobic010G222800 Sobic008G078000--Sobic010G222800 Sobic002G239601 Sobic002G239601 Sobic008G078000--Sobic002G239601 Sobic005G017000--Sobic008G078000 Sobic008G174966 Sobic008G174966 Sobic005G017000--Sobic008G174966 Sobic009G167100 Sobic009G167100 Sobic005G017000--Sobic009G167100 Sobic009G061000 Sobic009G061000 Sobic005G017000--Sobic009G061000 Sobic001G023500 Sobic001G023500 Sobic005G017000--Sobic001G023500 Sobic005G017000--Sobic004G118800 Sobic001G154300 Sobic001G154300 Sobic005G017000--Sobic001G154300 Sobic005G064100 Sobic005G064100 Sobic005G017000--Sobic005G064100 Sobic005G017000--Sobic008G101900 Sobic009G129700 Sobic009G129700 Sobic001G298800--Sobic009G129700 Sobic005G104100 Sobic005G104100 Sobic001G298800--Sobic005G104100 Sobic005G156100 Sobic005G156100 Sobic001G298800--Sobic005G156100 Sobic001G298800--Sobic008G038200 Sobic001G298800--Sobic007G065300 Sobic001G074000 Sobic001G074000 Sobic001G298800--Sobic001G074000 Sobic001G298800--Sobic007G128100 Sobic001G522300 Sobic001G522300 Sobic001G298800--Sobic001G522300 Sobic006G093200 Sobic006G093200 Sobic001G298800--Sobic006G093200 Sobic002G425200--Sobic003G177000 Sobic002G425200--Sobic007G159200 Sobic002G425200--Sobic008G038200 Sobic008G088842 Sobic008G088842 Sobic002G425200--Sobic008G088842 Sobic002G425200--Sobic006G280100 Sobic004G199200 Sobic004G199200 Sobic002G425200--Sobic004G199200 Sobic006G067700 Sobic006G067700 Sobic002G425200--Sobic006G067700 Sobic008G080500 Sobic008G080500 Sobic002G425200--Sobic008G080500 Sobic006G112700 Sobic006G112700 Sobic002G425200--Sobic006G112700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.