Gene annotation
Transcriptome id Sobic.003G207300.1
Synonym Sb03g026880
Functional annotation OsFBD3 - F-box and FBD domain containing protein, expressed
UniProt C5XQ62
Pfam PF00646 PF08387
Panther DB PTHR32212 PTHR32212:SF119
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G03030 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os01g41270.1 : OsFBD3 - F-box and FBD domain containing protein, expressed
MaizeGDB (Corn) Zm00025a038448
Brachypodium KQK08570 , KQK08569
Barley -
Wheat TraesCS3B02G244600 , TraesCS3D02G216500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G041000 OsLonP2 - Putative Lon protease homologue, expressed K04485: radA, DNA repair protein RadA/Sms
2 Sobic.007G159200 PWWP domain containing protein, expressed -
3 Sobic.004G111000 bromodomain containing protein, expressed -
4 Sobic.002G336200 nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
5 Sobic.003G361400 nsp1-like C-terminal region family protein, expressed K14306: NUP62, nuclear pore complex protein Nup62
6 Sobic.001G502600 tetratricopeptide repeat containing protein, putative, expressed -
7 Sobic.004G118800 receptor lectin kinase like protein, putative, expressed -
8 Sobic.002G219900 Spc97 / Spc98 family protein, putative, expressed K16570: TUBGCP3, gamma-tubulin complex component 3
9 Sobic.003G098900 - -
10 Sobic.001G465500 radical SAM enzyme, putative, expressed -
11 Sobic.005G191700 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
12 Sobic.002G202000 double-stranded RNA binding motif containing protein, expressed -
13 Sobic.004G305100 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
14 Sobic.003G127500 expressed protein -
15 Sobic.003G177000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
16 Sobic.003G274400 WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
17 Sobic.010G149600 intracellular protein transport protein USO1-related, putative, expressed -
18 Sobic.010G051400 zinc finger protein, putative, expressed K04706: E3 SUMO-protein ligase PIAS1
19 Sobic.008G078000 EDM2, putative, expressed -
20 Sobic.002G430900 PWWP domain containing protein, expressed -


Gene co-expression network
sample Sobic003G207300 Sobic003G207300 Sobic010G041000 Sobic010G041000 Sobic003G207300--Sobic010G041000 Sobic007G159200 Sobic007G159200 Sobic003G207300--Sobic007G159200 Sobic004G111000 Sobic004G111000 Sobic003G207300--Sobic004G111000 Sobic002G336200 Sobic002G336200 Sobic003G207300--Sobic002G336200 Sobic003G361400 Sobic003G361400 Sobic003G207300--Sobic003G361400 Sobic001G502600 Sobic001G502600 Sobic003G207300--Sobic001G502600 Sobic004G118800 Sobic004G118800 Sobic003G207300--Sobic004G118800 Sobic002G219900 Sobic002G219900 Sobic003G207300--Sobic002G219900 Sobic003G098900 Sobic003G098900 Sobic003G207300--Sobic003G098900 Sobic004G305100 Sobic004G305100 Sobic010G041000--Sobic004G305100 Sobic010G041000--Sobic004G111000 Sobic010G041000--Sobic003G098900 Sobic001G008000 Sobic001G008000 Sobic010G041000--Sobic001G008000 Sobic010G041000--Sobic003G361400 Sobic010G041000--Sobic001G502600 Sobic002G110500 Sobic002G110500 Sobic010G041000--Sobic002G110500 Sobic004G038100 Sobic004G038100 Sobic010G041000--Sobic004G038100 Sobic007G059700 Sobic007G059700 Sobic010G041000--Sobic007G059700 Sobic008G080500 Sobic008G080500 Sobic007G159200--Sobic008G080500 Sobic001G248100 Sobic001G248100 Sobic007G159200--Sobic001G248100 Sobic006G280100 Sobic006G280100 Sobic007G159200--Sobic006G280100 Sobic010G051400 Sobic010G051400 Sobic007G159200--Sobic010G051400 Sobic004G355800 Sobic004G355800 Sobic007G159200--Sobic004G355800 Sobic002G425200 Sobic002G425200 Sobic007G159200--Sobic002G425200 Sobic010G262100 Sobic010G262100 Sobic007G159200--Sobic010G262100 Sobic001G300000 Sobic001G300000 Sobic007G159200--Sobic001G300000 Sobic009G007700 Sobic009G007700 Sobic007G159200--Sobic009G007700 Sobic004G285000 Sobic004G285000 Sobic004G111000--Sobic004G285000 Sobic003G409200 Sobic003G409200 Sobic004G111000--Sobic003G409200 Sobic010G215900 Sobic010G215900 Sobic004G111000--Sobic010G215900 Sobic007G044100 Sobic007G044100 Sobic004G111000--Sobic007G044100 Sobic010G279900 Sobic010G279900 Sobic004G111000--Sobic010G279900 Sobic004G043750 Sobic004G043750 Sobic004G111000--Sobic004G043750 Sobic006G056000 Sobic006G056000 Sobic004G111000--Sobic006G056000 Sobic004G086200 Sobic004G086200 Sobic004G111000--Sobic004G086200 Sobic002G263700 Sobic002G263700 Sobic004G111000--Sobic002G263700 Sobic008G164700 Sobic008G164700 Sobic002G336200--Sobic008G164700 Sobic008G057000 Sobic008G057000 Sobic002G336200--Sobic008G057000 Sobic006G118300 Sobic006G118300 Sobic002G336200--Sobic006G118300 Sobic002G336200--Sobic003G207300 Sobic003G217200 Sobic003G217200 Sobic002G336200--Sobic003G217200 Sobic005G108000 Sobic005G108000 Sobic002G336200--Sobic005G108000 Sobic001G245900 Sobic001G245900 Sobic002G336200--Sobic001G245900 Sobic002G060600 Sobic002G060600 Sobic002G336200--Sobic002G060600 Sobic001G542450 Sobic001G542450 Sobic002G336200--Sobic001G542450 Sobic003G259600 Sobic003G259600 Sobic003G361400--Sobic003G259600 Sobic001G373000 Sobic001G373000 Sobic003G361400--Sobic001G373000 Sobic003G361400--Sobic002G219900 Sobic003G361400--Sobic004G038100 Sobic001G013300 Sobic001G013300 Sobic003G361400--Sobic001G013300 Sobic002G043000 Sobic002G043000 Sobic003G361400--Sobic002G043000 Sobic001G033900 Sobic001G033900 Sobic003G361400--Sobic001G033900 Sobic002G372500 Sobic002G372500 Sobic003G361400--Sobic002G372500 Sobic003G360300 Sobic003G360300 Sobic003G361400--Sobic003G360300 Sobic001G502600--Sobic001G008000 Sobic001G502600--Sobic004G305100 Sobic001G502600--Sobic010G041000 Sobic006G273900 Sobic006G273900 Sobic001G502600--Sobic006G273900 Sobic005G100900 Sobic005G100900 Sobic001G502600--Sobic005G100900 Sobic003G209400 Sobic003G209400 Sobic001G502600--Sobic003G209400 Sobic002G155000 Sobic002G155000 Sobic001G502600--Sobic002G155000 Sobic003G332900 Sobic003G332900 Sobic001G502600--Sobic003G332900 Sobic001G190400 Sobic001G190400 Sobic001G502600--Sobic001G190400 Sobic001G371700 Sobic001G371700 Sobic004G118800--Sobic001G371700 Sobic008G101900 Sobic008G101900 Sobic004G118800--Sobic008G101900 Sobic002G001100 Sobic002G001100 Sobic004G118800--Sobic002G001100 Sobic008G038200 Sobic008G038200 Sobic004G118800--Sobic008G038200 Sobic003G177000 Sobic003G177000 Sobic004G118800--Sobic003G177000 Sobic008G078000 Sobic008G078000 Sobic004G118800--Sobic008G078000 Sobic005G017000 Sobic005G017000 Sobic004G118800--Sobic005G017000 Sobic001G298800 Sobic001G298800 Sobic004G118800--Sobic001G298800 Sobic004G118800--Sobic002G425200 Sobic002G430900 Sobic002G430900 Sobic002G219900--Sobic002G430900 Sobic010G149600 Sobic010G149600 Sobic002G219900--Sobic010G149600 Sobic007G125700 Sobic007G125700 Sobic002G219900--Sobic007G125700 Sobic001G395200 Sobic001G395200 Sobic002G219900--Sobic001G395200 Sobic002G219900--Sobic006G280100 Sobic002G219900--Sobic003G361400 Sobic001G143600 Sobic001G143600 Sobic002G219900--Sobic001G143600 Sobic003G274400 Sobic003G274400 Sobic002G219900--Sobic003G274400 Sobic003G027800 Sobic003G027800 Sobic002G219900--Sobic003G027800 Sobic003G098900--Sobic004G305100 Sobic003G098900--Sobic010G041000 Sobic003G098900--Sobic004G111000 Sobic002G394800 Sobic002G394800 Sobic003G098900--Sobic002G394800 Sobic003G098900--Sobic004G285000 Sobic003G098900--Sobic010G215900 Sobic003G098900--Sobic003G361400 Sobic003G436600 Sobic003G436600 Sobic003G098900--Sobic003G436600 Sobic002G177500 Sobic002G177500 Sobic003G098900--Sobic002G177500
Octagon: transcription factors


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