Gene annotation
Transcriptome id Sobic.003G098900.1
Synonym EDA35, Sb03g008280
Functional annotation -
UniProt C5XEV6
Pfam PF07065
Panther DB PTHR15323 PTHR15323:SF6
NCBI CDD KOG2983; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0007049; cell cycle


Orthologs (automatic annotation)
TAIR AT4G05440 : temperature sensing protein-related
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a023753
Brachypodium PNT69820 , KQK02363
Barley HORVU3Hr1G000830.4 , HORVU3Hr1G000830.5 , HORVU3Hr1G000830.6 , HORVU3Hr1G000830.1 , HORVU3Hr1G000830.2 , HORVU3Hr1G000830.3 , HORVU3Hr1G000950.1 , HORVU7Hr1G008340.2 , HORVU7Hr1G008340.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G305100 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
2 Sobic.010G041000 OsLonP2 - Putative Lon protease homologue, expressed K04485: radA, DNA repair protein RadA/Sms
3 Sobic.004G111000 bromodomain containing protein, expressed -
4 Sobic.002G394800 SWIB/MDM2 domain containing protein, expressed K11650: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
5 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
6 Sobic.010G215900 type II intron maturase protein, putative, expressed -
7 Sobic.003G361400 nsp1-like C-terminal region family protein, expressed K14306: NUP62, nuclear pore complex protein Nup62
8 Sobic.003G436600 expressed protein -
9 Sobic.002G177500 expressed protein -
10 Sobic.004G321700 mitochondrial transcription termination factor family protein, putative, expressed K15032: mTERF domain-containing protein, mitochondrial
11 Sobic.002G184400 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
12 Sobic.002G430900 PWWP domain containing protein, expressed -
13 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
14 Sobic.009G163600 exosome complex exonuclease, putative, expressed K11600: RRP41, EXOSC4, exosome complex component RRP41
15 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -
16 Sobic.003G253400 expressed protein -
17 Sobic.001G003500 la domain containing protein, putative, expressed K18757: la-related protein 1
18 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
19 Sobic.003G207300 OsFBD3 - F-box and FBD domain containing protein, expressed -
20 Sobic.004G206300 pre-mRNA-splicing factor ISY1, putative, expressed K12870: pre-mRNA-splicing factor ISY1


Gene co-expression network
sample Sobic003G098900 Sobic003G098900 Sobic004G305100 Sobic004G305100 Sobic003G098900--Sobic004G305100 Sobic010G041000 Sobic010G041000 Sobic003G098900--Sobic010G041000 Sobic004G111000 Sobic004G111000 Sobic003G098900--Sobic004G111000 Sobic002G394800 Sobic002G394800 Sobic003G098900--Sobic002G394800 Sobic004G285000 Sobic004G285000 Sobic003G098900--Sobic004G285000 Sobic010G215900 Sobic010G215900 Sobic003G098900--Sobic010G215900 Sobic003G361400 Sobic003G361400 Sobic003G098900--Sobic003G361400 Sobic003G436600 Sobic003G436600 Sobic003G098900--Sobic003G436600 Sobic002G177500 Sobic002G177500 Sobic003G098900--Sobic002G177500 Sobic004G305100--Sobic003G098900 Sobic004G305100--Sobic010G041000 Sobic001G502600 Sobic001G502600 Sobic004G305100--Sobic001G502600 Sobic006G125900 Sobic006G125900 Sobic004G305100--Sobic006G125900 Sobic006G231400 Sobic006G231400 Sobic004G305100--Sobic006G231400 Sobic002G318800 Sobic002G318800 Sobic004G305100--Sobic002G318800 Sobic004G305100--Sobic010G215900 Sobic009G163600 Sobic009G163600 Sobic004G305100--Sobic009G163600 Sobic006G140400 Sobic006G140400 Sobic004G305100--Sobic006G140400 Sobic010G041000--Sobic004G305100 Sobic010G041000--Sobic004G111000 Sobic010G041000--Sobic003G098900 Sobic001G008000 Sobic001G008000 Sobic010G041000--Sobic001G008000 Sobic010G041000--Sobic003G361400 Sobic010G041000--Sobic001G502600 Sobic002G110500 Sobic002G110500 Sobic010G041000--Sobic002G110500 Sobic004G038100 Sobic004G038100 Sobic010G041000--Sobic004G038100 Sobic007G059700 Sobic007G059700 Sobic010G041000--Sobic007G059700 Sobic004G111000--Sobic004G285000 Sobic003G409200 Sobic003G409200 Sobic004G111000--Sobic003G409200 Sobic004G111000--Sobic010G215900 Sobic007G044100 Sobic007G044100 Sobic004G111000--Sobic007G044100 Sobic010G279900 Sobic010G279900 Sobic004G111000--Sobic010G279900 Sobic004G043750 Sobic004G043750 Sobic004G111000--Sobic004G043750 Sobic006G056000 Sobic006G056000 Sobic004G111000--Sobic006G056000 Sobic004G086200 Sobic004G086200 Sobic004G111000--Sobic004G086200 Sobic002G263700 Sobic002G263700 Sobic004G111000--Sobic002G263700 Sobic006G233300 Sobic006G233300 Sobic002G394800--Sobic006G233300 Sobic002G143900 Sobic002G143900 Sobic002G394800--Sobic002G143900 Sobic006G233000 Sobic006G233000 Sobic002G394800--Sobic006G233000 Sobic002G280600 Sobic002G280600 Sobic002G394800--Sobic002G280600 Sobic006G245700 Sobic006G245700 Sobic002G394800--Sobic006G245700 Sobic006G272200 Sobic006G272200 Sobic002G394800--Sobic006G272200 Sobic001G370300 Sobic001G370300 Sobic002G394800--Sobic001G370300 Sobic004G249300 Sobic004G249300 Sobic002G394800--Sobic004G249300 Sobic002G430900 Sobic002G430900 Sobic002G394800--Sobic002G430900 Sobic004G285000--Sobic004G086200 Sobic004G285000--Sobic004G111000 Sobic001G346900 Sobic001G346900 Sobic004G285000--Sobic001G346900 Sobic003G427100 Sobic003G427100 Sobic004G285000--Sobic003G427100 Sobic009G151200 Sobic009G151200 Sobic004G285000--Sobic009G151200 Sobic004G285000--Sobic010G215900 Sobic004G285000--Sobic003G409200 Sobic004G285000--Sobic007G044100 Sobic001G013300 Sobic001G013300 Sobic004G285000--Sobic001G013300 Sobic010G215900--Sobic003G409200 Sobic010G215900--Sobic004G285000 Sobic010G215900--Sobic004G111000 Sobic010G215900--Sobic001G346900 Sobic010G215900--Sobic001G013300 Sobic006G226300 Sobic006G226300 Sobic010G215900--Sobic006G226300 Sobic008G147200 Sobic008G147200 Sobic010G215900--Sobic008G147200 Sobic003G042400 Sobic003G042400 Sobic010G215900--Sobic003G042400 Sobic004G155600 Sobic004G155600 Sobic010G215900--Sobic004G155600 Sobic003G259600 Sobic003G259600 Sobic003G361400--Sobic003G259600 Sobic001G373000 Sobic001G373000 Sobic003G361400--Sobic001G373000 Sobic002G219900 Sobic002G219900 Sobic003G361400--Sobic002G219900 Sobic003G361400--Sobic004G038100 Sobic003G361400--Sobic001G013300 Sobic002G043000 Sobic002G043000 Sobic003G361400--Sobic002G043000 Sobic001G033900 Sobic001G033900 Sobic003G361400--Sobic001G033900 Sobic002G372500 Sobic002G372500 Sobic003G361400--Sobic002G372500 Sobic003G360300 Sobic003G360300 Sobic003G361400--Sobic003G360300 Sobic003G436600--Sobic009G163600 Sobic003G425100 Sobic003G425100 Sobic003G436600--Sobic003G425100 Sobic003G436600--Sobic002G177500 Sobic004G027400 Sobic004G027400 Sobic003G436600--Sobic004G027400 Sobic003G436600--Sobic007G059700 Sobic001G368300 Sobic001G368300 Sobic003G436600--Sobic001G368300 Sobic005G088900 Sobic005G088900 Sobic003G436600--Sobic005G088900 Sobic003G436600--Sobic003G361400 Sobic001G453500 Sobic001G453500 Sobic003G436600--Sobic001G453500 Sobic002G177500--Sobic001G370300 Sobic002G177500--Sobic004G285000 Sobic001G168100 Sobic001G168100 Sobic002G177500--Sobic001G168100 Sobic002G177500--Sobic003G436600 Sobic002G177500--Sobic001G013300 Sobic002G223300 Sobic002G223300 Sobic002G177500--Sobic002G223300 Sobic002G399200 Sobic002G399200 Sobic002G177500--Sobic002G399200 Sobic002G177500--Sobic006G226300 Sobic002G177500--Sobic009G151200
Octagon: transcription factors


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