Gene annotation
Transcriptome id Sobic.002G177500.1,Sobic.002G177500.2
Synonym Sb02g022620
Functional annotation expressed protein
UniProt C5XAK4 , A0A1B6QC05
Pfam PF16719
Panther DB PTHR33827 PTHR33827:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15215 : -
RAP-DB (Rice) LOC_Os09g17770.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a046618
Brachypodium -
Barley HORVU5Hr1G041840.4 , HORVU5Hr1G041840.5 , HORVU5Hr1G041840.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G370300 WD domain, G-beta repeat domain containing protein, expressed K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
2 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
3 Sobic.001G168100 OsFBD13 - F-box and FBD domain containing protein, expressed -
4 Sobic.003G436600 expressed protein -
5 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -
6 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
7 Sobic.002G399200 - K14779: DDX52, ATP-dependent RNA helicase DDX52/ROK1
8 Sobic.006G226300 SDA1, putative, expressed K14856: SDA1, protein SDA1
9 Sobic.009G151200 expressed protein -
10 Sobic.005G120700 ThiF family domain containing protein, putative, expressed K10684: UBLE1A, ubiquitin-like 1-activating enzyme E1 A
11 Sobic.010G063566 - K11111: TERF2, telomeric repeat-binding factor 2
12 Sobic.003G127500 expressed protein -
13 Sobic.002G017900 tetratricopeptide repeat containing protein, putative, expressed K11291: nuclear autoantigenic sperm protein
14 Sobic.002G339800 B3 DNA binding domain containing protein, putative, expressed -
15 Sobic.009G040500 glioma tumor suppressor candidate region gene 2 protein, putative, expressed K14840: NOP53, nucleolar protein 53
16 Sobic.010G215900 type II intron maturase protein, putative, expressed -
17 Sobic.001G023800 expressed protein -
18 Sobic.004G085300 Sel1 repeat domain containing protein, putative, expressed -
19 Sobic.002G357100 SUMO-activating enzyme subunit 2, putative, expressed K10685: UBLE1B, SAE2, ubiquitin-like 1-activating enzyme E1 B
20 Sobic.002G356600 ZCW7, putative, expressed -


Gene co-expression network
sample Sobic002G177500 Sobic002G177500 Sobic001G370300 Sobic001G370300 Sobic002G177500--Sobic001G370300 Sobic004G285000 Sobic004G285000 Sobic002G177500--Sobic004G285000 Sobic001G168100 Sobic001G168100 Sobic002G177500--Sobic001G168100 Sobic003G436600 Sobic003G436600 Sobic002G177500--Sobic003G436600 Sobic001G013300 Sobic001G013300 Sobic002G177500--Sobic001G013300 Sobic002G223300 Sobic002G223300 Sobic002G177500--Sobic002G223300 Sobic002G399200 Sobic002G399200 Sobic002G177500--Sobic002G399200 Sobic006G226300 Sobic006G226300 Sobic002G177500--Sobic006G226300 Sobic009G151200 Sobic009G151200 Sobic002G177500--Sobic009G151200 Sobic002G077900 Sobic002G077900 Sobic001G370300--Sobic002G077900 Sobic001G370300--Sobic002G177500 Sobic006G245700 Sobic006G245700 Sobic001G370300--Sobic006G245700 Sobic010G247400 Sobic010G247400 Sobic001G370300--Sobic010G247400 Sobic001G285300 Sobic001G285300 Sobic001G370300--Sobic001G285300 Sobic003G439800 Sobic003G439800 Sobic001G370300--Sobic003G439800 Sobic001G023800 Sobic001G023800 Sobic001G370300--Sobic001G023800 Sobic006G252100 Sobic006G252100 Sobic001G370300--Sobic006G252100 Sobic004G057800 Sobic004G057800 Sobic001G370300--Sobic004G057800 Sobic004G086200 Sobic004G086200 Sobic004G285000--Sobic004G086200 Sobic004G111000 Sobic004G111000 Sobic004G285000--Sobic004G111000 Sobic001G346900 Sobic001G346900 Sobic004G285000--Sobic001G346900 Sobic003G427100 Sobic003G427100 Sobic004G285000--Sobic003G427100 Sobic004G285000--Sobic009G151200 Sobic010G215900 Sobic010G215900 Sobic004G285000--Sobic010G215900 Sobic003G409200 Sobic003G409200 Sobic004G285000--Sobic003G409200 Sobic007G044100 Sobic007G044100 Sobic004G285000--Sobic007G044100 Sobic004G285000--Sobic001G013300 Sobic001G168100--Sobic002G177500 Sobic001G168100--Sobic001G013300 Sobic001G168100--Sobic004G285000 Sobic001G168100--Sobic002G223300 Sobic003G223500 Sobic003G223500 Sobic001G168100--Sobic003G223500 Sobic007G043400 Sobic007G043400 Sobic001G168100--Sobic007G043400 Sobic003G408300 Sobic003G408300 Sobic001G168100--Sobic003G408300 Sobic002G339800 Sobic002G339800 Sobic001G168100--Sobic002G339800 Sobic001G168100--Sobic001G023800 Sobic009G163600 Sobic009G163600 Sobic003G436600--Sobic009G163600 Sobic003G425100 Sobic003G425100 Sobic003G436600--Sobic003G425100 Sobic003G436600--Sobic002G177500 Sobic004G027400 Sobic004G027400 Sobic003G436600--Sobic004G027400 Sobic007G059700 Sobic007G059700 Sobic003G436600--Sobic007G059700 Sobic001G368300 Sobic001G368300 Sobic003G436600--Sobic001G368300 Sobic005G088900 Sobic005G088900 Sobic003G436600--Sobic005G088900 Sobic003G361400 Sobic003G361400 Sobic003G436600--Sobic003G361400 Sobic001G453500 Sobic001G453500 Sobic003G436600--Sobic001G453500 Sobic001G013300--Sobic004G285000 Sobic001G373000 Sobic001G373000 Sobic001G013300--Sobic001G373000 Sobic008G147200 Sobic008G147200 Sobic001G013300--Sobic008G147200 Sobic001G013300--Sobic001G346900 Sobic001G004100 Sobic001G004100 Sobic001G013300--Sobic001G004100 Sobic001G013300--Sobic010G215900 Sobic001G013300--Sobic003G409200 Sobic007G187600 Sobic007G187600 Sobic001G013300--Sobic007G187600 Sobic001G013300--Sobic001G023800 Sobic002G334600 Sobic002G334600 Sobic002G223300--Sobic002G334600 Sobic004G085300 Sobic004G085300 Sobic002G223300--Sobic004G085300 Sobic002G223300--Sobic009G151200 Sobic003G132700 Sobic003G132700 Sobic002G223300--Sobic003G132700 Sobic007G046900 Sobic007G046900 Sobic002G223300--Sobic007G046900 Sobic002G223300--Sobic004G285000 Sobic006G210200 Sobic006G210200 Sobic002G223300--Sobic006G210200 Sobic002G050500 Sobic002G050500 Sobic002G223300--Sobic002G050500 Sobic002G223300--Sobic002G339800 Sobic002G262100 Sobic002G262100 Sobic002G399200--Sobic002G262100 Sobic008G163500 Sobic008G163500 Sobic002G399200--Sobic008G163500 Sobic009G235200 Sobic009G235200 Sobic002G399200--Sobic009G235200 Sobic004G173100 Sobic004G173100 Sobic002G399200--Sobic004G173100 Sobic002G399200--Sobic003G425100 Sobic002G399200--Sobic002G177500 Sobic002G399200--Sobic006G226300 Sobic002G399200--Sobic009G163600 Sobic009G040500 Sobic009G040500 Sobic002G399200--Sobic009G040500 Sobic002G142600 Sobic002G142600 Sobic006G226300--Sobic002G142600 Sobic006G226300--Sobic001G346900 Sobic005G157100 Sobic005G157100 Sobic006G226300--Sobic005G157100 Sobic003G042400 Sobic003G042400 Sobic006G226300--Sobic003G042400 Sobic006G226300--Sobic004G285000 Sobic006G226300--Sobic008G147200 Sobic005G137700 Sobic005G137700 Sobic006G226300--Sobic005G137700 Sobic003G258900 Sobic003G258900 Sobic006G226300--Sobic003G258900 Sobic001G246500 Sobic001G246500 Sobic006G226300--Sobic001G246500 Sobic006G248500 Sobic006G248500 Sobic009G151200--Sobic006G248500 Sobic002G259800 Sobic002G259800 Sobic009G151200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic009G151200--Sobic005G133500 Sobic009G151200--Sobic004G285000 Sobic001G424600 Sobic001G424600 Sobic009G151200--Sobic001G424600 Sobic009G151200--Sobic004G085300 Sobic008G100100 Sobic008G100100 Sobic009G151200--Sobic008G100100 Sobic009G151200--Sobic004G086200 Sobic004G156500 Sobic004G156500 Sobic009G151200--Sobic004G156500
Octagon: transcription factors


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