Gene annotation
Transcriptome id Sobic.001G168100.1
Synonym Sb01g014700
Functional annotation OsFBD13 - F-box and FBD domain containing protein, expressed
UniProt A0A1B6QJD2
Pfam PF00646 PF08387
Panther DB PTHR32212 PTHR32212:SF61
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G03220 : Protein with RNI-like/FBD-like domains
RAP-DB (Rice) LOC_Os07g02760.1 : OsFBD13 - F-box and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G168100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G177500 expressed protein -
2 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -
3 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
4 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
5 Sobic.003G223500 WD domain, G-beta repeat domain containing protein, expressed K14299: nucleoporin SEH1
6 Sobic.007G043400 transaldolase, putative, expressed K00616: E2.2.1.2, talA, transaldolase
7 Sobic.003G408300 WD domain, G-beta repeat domain containing protein, expressed K14791: periodic tryptophan protein 1
8 Sobic.002G339800 B3 DNA binding domain containing protein, putative, expressed -
9 Sobic.001G023800 expressed protein -
10 Sobic.006G056000 OsFBL16 - F-box domain and LRR containing protein, expressed -
11 Sobic.010G063566 - K11111: TERF2, telomeric repeat-binding factor 2
12 Sobic.001G370300 WD domain, G-beta repeat domain containing protein, expressed K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
13 Sobic.002G127400 glycosyl hydrolase family 10 protein, putative, expressed -
14 Sobic.001G061800 RFC3 - Putative clamp loader of PCNA, replication factor C subunit 3, expressed K10756: replication factor C subunit 3/5
15 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
16 Sobic.005G079201 - -
17 Sobic.001G315400 expressed protein -
18 Sobic.004G330600 GHMP kinases ATP-binding protein, putative, expressed K01597: MVD, diphosphomevalonate decarboxylase
19 Sobic.009G040500 glioma tumor suppressor candidate region gene 2 protein, putative, expressed K14840: NOP53, nucleolar protein 53
20 Sobic.009G045300 OsFBL21 - F-box domain and LRR containing protein, expressed K14485: transport inhibitor response 1


Gene co-expression network
sample Sobic001G168100 Sobic001G168100 Sobic002G177500 Sobic002G177500 Sobic001G168100--Sobic002G177500 Sobic001G013300 Sobic001G013300 Sobic001G168100--Sobic001G013300 Sobic004G285000 Sobic004G285000 Sobic001G168100--Sobic004G285000 Sobic002G223300 Sobic002G223300 Sobic001G168100--Sobic002G223300 Sobic003G223500 Sobic003G223500 Sobic001G168100--Sobic003G223500 Sobic007G043400 Sobic007G043400 Sobic001G168100--Sobic007G043400 Sobic003G408300 Sobic003G408300 Sobic001G168100--Sobic003G408300 Sobic002G339800 Sobic002G339800 Sobic001G168100--Sobic002G339800 Sobic001G023800 Sobic001G023800 Sobic001G168100--Sobic001G023800 Sobic001G370300 Sobic001G370300 Sobic002G177500--Sobic001G370300 Sobic002G177500--Sobic004G285000 Sobic002G177500--Sobic001G168100 Sobic003G436600 Sobic003G436600 Sobic002G177500--Sobic003G436600 Sobic002G177500--Sobic001G013300 Sobic002G177500--Sobic002G223300 Sobic002G399200 Sobic002G399200 Sobic002G177500--Sobic002G399200 Sobic006G226300 Sobic006G226300 Sobic002G177500--Sobic006G226300 Sobic009G151200 Sobic009G151200 Sobic002G177500--Sobic009G151200 Sobic001G013300--Sobic004G285000 Sobic001G373000 Sobic001G373000 Sobic001G013300--Sobic001G373000 Sobic008G147200 Sobic008G147200 Sobic001G013300--Sobic008G147200 Sobic001G346900 Sobic001G346900 Sobic001G013300--Sobic001G346900 Sobic001G004100 Sobic001G004100 Sobic001G013300--Sobic001G004100 Sobic010G215900 Sobic010G215900 Sobic001G013300--Sobic010G215900 Sobic003G409200 Sobic003G409200 Sobic001G013300--Sobic003G409200 Sobic007G187600 Sobic007G187600 Sobic001G013300--Sobic007G187600 Sobic001G013300--Sobic001G023800 Sobic004G086200 Sobic004G086200 Sobic004G285000--Sobic004G086200 Sobic004G111000 Sobic004G111000 Sobic004G285000--Sobic004G111000 Sobic004G285000--Sobic001G346900 Sobic003G427100 Sobic003G427100 Sobic004G285000--Sobic003G427100 Sobic004G285000--Sobic009G151200 Sobic004G285000--Sobic010G215900 Sobic004G285000--Sobic003G409200 Sobic007G044100 Sobic007G044100 Sobic004G285000--Sobic007G044100 Sobic004G285000--Sobic001G013300 Sobic002G334600 Sobic002G334600 Sobic002G223300--Sobic002G334600 Sobic004G085300 Sobic004G085300 Sobic002G223300--Sobic004G085300 Sobic002G223300--Sobic009G151200 Sobic003G132700 Sobic003G132700 Sobic002G223300--Sobic003G132700 Sobic007G046900 Sobic007G046900 Sobic002G223300--Sobic007G046900 Sobic002G223300--Sobic004G285000 Sobic006G210200 Sobic006G210200 Sobic002G223300--Sobic006G210200 Sobic002G050500 Sobic002G050500 Sobic002G223300--Sobic002G050500 Sobic002G223300--Sobic002G339800 Sobic001G061800 Sobic001G061800 Sobic003G223500--Sobic001G061800 Sobic005G178700 Sobic005G178700 Sobic003G223500--Sobic005G178700 Sobic004G011000 Sobic004G011000 Sobic003G223500--Sobic004G011000 Sobic001G226000 Sobic001G226000 Sobic003G223500--Sobic001G226000 Sobic003G223500--Sobic001G168100 Sobic003G223500--Sobic002G334600 Sobic003G223500--Sobic007G043400 Sobic007G053400 Sobic007G053400 Sobic003G223500--Sobic007G053400 Sobic002G218700 Sobic002G218700 Sobic003G223500--Sobic002G218700 Sobic002G133000 Sobic002G133000 Sobic007G043400--Sobic002G133000 Sobic004G330600 Sobic004G330600 Sobic007G043400--Sobic004G330600 Sobic001G296800 Sobic001G296800 Sobic007G043400--Sobic001G296800 Sobic009G169200 Sobic009G169200 Sobic007G043400--Sobic009G169200 Sobic007G043400--Sobic001G168100 Sobic007G043400--Sobic003G223500 Sobic002G238500 Sobic002G238500 Sobic007G043400--Sobic002G238500 Sobic006G029400 Sobic006G029400 Sobic007G043400--Sobic006G029400 Sobic008G083400 Sobic008G083400 Sobic007G043400--Sobic008G083400 Sobic008G016100 Sobic008G016100 Sobic003G408300--Sobic008G016100 Sobic002G263200 Sobic002G263200 Sobic003G408300--Sobic002G263200 Sobic007G187900 Sobic007G187900 Sobic003G408300--Sobic007G187900 Sobic002G116500 Sobic002G116500 Sobic003G408300--Sobic002G116500 Sobic003G408300--Sobic001G168100 Sobic006G084000 Sobic006G084000 Sobic003G408300--Sobic006G084000 Sobic002G332200 Sobic002G332200 Sobic003G408300--Sobic002G332200 Sobic006G251500 Sobic006G251500 Sobic003G408300--Sobic006G251500 Sobic009G143800 Sobic009G143800 Sobic003G408300--Sobic009G143800 Sobic002G339800--Sobic002G223300 Sobic002G339800--Sobic002G177500 Sobic002G017900 Sobic002G017900 Sobic002G339800--Sobic002G017900 Sobic002G339800--Sobic002G263200 Sobic009G045300 Sobic009G045300 Sobic002G339800--Sobic009G045300 Sobic002G339800--Sobic001G013300 Sobic002G339800--Sobic004G285000 Sobic002G339800--Sobic001G168100 Sobic010G063566 Sobic010G063566 Sobic002G339800--Sobic010G063566 Sobic010G266500 Sobic010G266500 Sobic001G023800--Sobic010G266500 Sobic001G023800--Sobic007G187600 Sobic010G186600 Sobic010G186600 Sobic001G023800--Sobic010G186600 Sobic002G005000 Sobic002G005000 Sobic001G023800--Sobic002G005000 Sobic001G023800--Sobic001G373000 Sobic001G023800--Sobic003G427100 Sobic001G023800--Sobic001G013300 Sobic008G164600 Sobic008G164600 Sobic001G023800--Sobic008G164600 Sobic001G291800 Sobic001G291800 Sobic001G023800--Sobic001G291800
Octagon: transcription factors


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