Gene annotation
Transcriptome id Sobic.002G127400.2,Sobic.002G127400.1
Synonym Sb02g010990
Functional annotation glycosyl hydrolase family 10 protein, putative, expressed
UniProt A0A1B6QAX0 , C5X574
Pfam PF00331 PF02018
Panther DB PTHR31490 PTHR31490:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds GO:0016798hydrolase activity, acting on glycosyl bonds


Orthologs (automatic annotation)
TAIR AT1G10050 : glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein
RAP-DB (Rice) LOC_Os07g27320.1 : glycosyl hydrolase family 10 protein, putative, expressed
MaizeGDB (Corn) Zm00025a045860
Brachypodium PNT75204 , PNT75205 , PNT75206 , PNT75202 , PNT75203 , KQK16411 , KQK16410 , KQK16413 , KQK16412
Barley HORVU2Hr1G021350.15 , HORVU2Hr1G021350.16 , HORVU2Hr1G021350.11 , HORVU2Hr1G021350.10 , HORVU2Hr1G021350.13 , HORVU2Hr1G021350.12 , HORVU2Hr1G021350.9 , HORVU2Hr1G021350.8 , HORVU2Hr1G021350.1 , HORVU2Hr1G021350.3 , HORVU2Hr1G021350.2 , HORVU2Hr1G021350.5 , HORVU2Hr1G021350.4 , HORVU2Hr1G021350.7 , HORVU2Hr1G021350.6 , HORVU2Hr1G021350.14
Wheat TraesCS2B02G144300 , TraesCS2B02G144300 , TraesCS2B02G144300 , TraesCS2B02G144300 , TraesCS2B02G144300 , TraesCS2B02G144300 , TraesCS2A02G122200 , TraesCS2D02G124900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G338800 DEK C terminal domain containing protein, expressed -
2 Sobic.003G294600 Homeobox domain containing protein, expressed -
3 Sobic.003G435500 expressed protein -
4 Sobic.005G216300 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
5 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
6 Sobic.001G518400 EF hand family protein, putative, expressed -
7 Sobic.009G142000 plus-3 domain containing protein, putative, expressed -
8 Sobic.010G138900 cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed K11991: tRNA(adenine34) deaminase
9 Sobic.003G314700 expressed protein -
10 Sobic.001G138400 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
11 Sobic.003G099300 expressed protein K18749: LSM14, RAP55, protein LSM14
12 Sobic.009G088000 expressed protein -
13 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
14 Sobic.001G507900 methyltransferase, putative, expressed K00599: methyltransferase-like protein 6
15 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -
16 Sobic.003G235000 protein kinase domain containing protein, expressed -
17 Sobic.006G056000 OsFBL16 - F-box domain and LRR containing protein, expressed -
18 Sobic.010G147833 - -
19 Sobic.006G138000 expressed protein -
20 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT


Gene co-expression network
sample Sobic002G127400 Sobic002G127400 Sobic001G338800 Sobic001G338800 Sobic002G127400--Sobic001G338800 Sobic003G294600 Sobic003G294600 Sobic002G127400--Sobic003G294600 Sobic003G435500 Sobic003G435500 Sobic002G127400--Sobic003G435500 Sobic005G216300 Sobic005G216300 Sobic002G127400--Sobic005G216300 Sobic001G335900 Sobic001G335900 Sobic002G127400--Sobic001G335900 Sobic001G518400 Sobic001G518400 Sobic002G127400--Sobic001G518400 Sobic009G142000 Sobic009G142000 Sobic002G127400--Sobic009G142000 Sobic010G138900 Sobic010G138900 Sobic002G127400--Sobic010G138900 Sobic003G314700 Sobic003G314700 Sobic002G127400--Sobic003G314700 Sobic001G338800--Sobic002G127400 Sobic001G338800--Sobic003G294600 Sobic009G088000 Sobic009G088000 Sobic001G338800--Sobic009G088000 Sobic001G338800--Sobic001G335900 Sobic003G353600 Sobic003G353600 Sobic001G338800--Sobic003G353600 Sobic001G338800--Sobic009G142000 Sobic002G079100 Sobic002G079100 Sobic001G338800--Sobic002G079100 Sobic001G142100 Sobic001G142100 Sobic001G338800--Sobic001G142100 Sobic006G056000 Sobic006G056000 Sobic001G338800--Sobic006G056000 Sobic008G002500 Sobic008G002500 Sobic003G294600--Sobic008G002500 Sobic003G294600--Sobic009G142000 Sobic003G294600--Sobic009G088000 Sobic001G453000 Sobic001G453000 Sobic003G294600--Sobic001G453000 Sobic010G148932 Sobic010G148932 Sobic003G294600--Sobic010G148932 Sobic007G077900 Sobic007G077900 Sobic003G294600--Sobic007G077900 Sobic006G040800 Sobic006G040800 Sobic003G294600--Sobic006G040800 Sobic003G445500 Sobic003G445500 Sobic003G294600--Sobic003G445500 Sobic010G053600 Sobic010G053600 Sobic003G294600--Sobic010G053600 Sobic001G385400 Sobic001G385400 Sobic003G435500--Sobic001G385400 Sobic003G435500--Sobic010G138900 Sobic001G143600 Sobic001G143600 Sobic003G435500--Sobic001G143600 Sobic003G435500--Sobic002G127400 Sobic006G173200 Sobic006G173200 Sobic003G435500--Sobic006G173200 Sobic003G144300 Sobic003G144300 Sobic003G435500--Sobic003G144300 Sobic010G262100 Sobic010G262100 Sobic003G435500--Sobic010G262100 Sobic004G038100 Sobic004G038100 Sobic003G435500--Sobic004G038100 Sobic002G143200 Sobic002G143200 Sobic003G435500--Sobic002G143200 Sobic003G099300 Sobic003G099300 Sobic005G216300--Sobic003G099300 Sobic007G027700 Sobic007G027700 Sobic005G216300--Sobic007G027700 Sobic004G039600 Sobic004G039600 Sobic005G216300--Sobic004G039600 Sobic001G369000 Sobic001G369000 Sobic005G216300--Sobic001G369000 Sobic005G216300--Sobic001G335900 Sobic001G426600 Sobic001G426600 Sobic005G216300--Sobic001G426600 Sobic005G216300--Sobic001G142100 Sobic003G126600 Sobic003G126600 Sobic005G216300--Sobic003G126600 Sobic006G208500 Sobic006G208500 Sobic005G216300--Sobic006G208500 Sobic001G335900--Sobic001G369000 Sobic006G138000 Sobic006G138000 Sobic001G335900--Sobic006G138000 Sobic001G335900--Sobic001G518400 Sobic001G170100 Sobic001G170100 Sobic001G335900--Sobic001G170100 Sobic003G240700 Sobic003G240700 Sobic001G335900--Sobic003G240700 Sobic009G229600 Sobic009G229600 Sobic001G335900--Sobic009G229600 Sobic009G049400 Sobic009G049400 Sobic001G335900--Sobic009G049400 Sobic007G120500 Sobic007G120500 Sobic001G335900--Sobic007G120500 SobicK004100 SobicK004100 Sobic001G335900--SobicK004100 Sobic001G518400--Sobic001G170100 Sobic001G518400--Sobic006G138000 Sobic001G518400--Sobic001G335900 Sobic001G078100 Sobic001G078100 Sobic001G518400--Sobic001G078100 Sobic001G518400--Sobic009G229600 Sobic010G275500 Sobic010G275500 Sobic001G518400--Sobic010G275500 Sobic006G202200 Sobic006G202200 Sobic001G518400--Sobic006G202200 Sobic001G518400--Sobic003G126600 Sobic001G518400--Sobic001G369000 Sobic009G142000--Sobic003G294600 Sobic001G451300 Sobic001G451300 Sobic009G142000--Sobic001G451300 Sobic004G085000 Sobic004G085000 Sobic009G142000--Sobic004G085000 Sobic007G029200 Sobic007G029200 Sobic009G142000--Sobic007G029200 Sobic009G142000--Sobic001G453000 Sobic003G123100 Sobic003G123100 Sobic009G142000--Sobic003G123100 Sobic008G132000 Sobic008G132000 Sobic009G142000--Sobic008G132000 Sobic005G200900 Sobic005G200900 Sobic009G142000--Sobic005G200900 Sobic001G536000 Sobic001G536000 Sobic009G142000--Sobic001G536000 Sobic008G088842 Sobic008G088842 Sobic010G138900--Sobic008G088842 Sobic010G138900--Sobic010G262100 Sobic010G138900--Sobic001G451300 Sobic010G138900--Sobic009G142000 Sobic010G138900--Sobic001G453000 Sobic010G138900--Sobic003G435500 Sobic003G250900 Sobic003G250900 Sobic010G138900--Sobic003G250900 Sobic004G034700 Sobic004G034700 Sobic010G138900--Sobic004G034700 Sobic002G043100 Sobic002G043100 Sobic010G138900--Sobic002G043100 Sobic003G029600 Sobic003G029600 Sobic003G314700--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic003G314700--Sobic008G124800 Sobic001G437400 Sobic001G437400 Sobic003G314700--Sobic001G437400 Sobic003G314700--Sobic003G240700 Sobic003G405500 Sobic003G405500 Sobic003G314700--Sobic003G405500 Sobic007G019300 Sobic007G019300 Sobic003G314700--Sobic007G019300 Sobic004G204100 Sobic004G204100 Sobic003G314700--Sobic004G204100 Sobic003G314700--Sobic001G426600 Sobic002G412700 Sobic002G412700 Sobic003G314700--Sobic002G412700
Octagon: transcription factors


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