Gene annotation
Transcriptome id Sobic.001G507900.1
Synonym Sb01g047400
Functional annotation methyltransferase, putative, expressed
UniProt C5WYU0
Pfam PF10294 PF08242
Panther DB PTHR22809 PTHR22809:SF1
NCBI CDD KOG2361; Predicted methyltransferase
KEGG Orthology K00599; methyltransferase-like protein 6
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G26200 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os03g04940.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a000578
Brachypodium KQK23710
Barley HORVU4Hr1G084400.24 , HORVU4Hr1G084400.21 , HORVU4Hr1G084400.20 , HORVU4Hr1G084400.23 , HORVU4Hr1G084400.22 , HORVU4Hr1G084400.17 , HORVU4Hr1G084400.3 , HORVU4Hr1G084400.18 , HORVU4Hr1G084400.19 , HORVU4Hr1G084400.11 , HORVU4Hr1G084400.12 , HORVU4Hr1G084400.13 , HORVU4Hr1G084400.14 , HORVU4Hr1G084400.15 , HORVU4Hr1G084400.16
Wheat TraesCS4D02G339600 , TraesCS5A02G513400 , TraesCS4B02G344500
Populus -


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cDNA sequences
Sobic.001G507900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G213100 beta-galactosidase 8 precursor, putative, expressed K12309: GLB1, beta-galactosidase
2 Sobic.001G138400 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
3 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
4 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
5 Sobic.004G232000 TLD family protein, putative, expressed -
6 Sobic.002G127400 glycosyl hydrolase family 10 protein, putative, expressed -
7 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
8 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
9 Sobic.001G393700 expressed protein -
10 Sobic.010G073200 nucleolar GTP-binding protein 1, putative, expressed K06943: nucleolar GTP-binding protein
11 Sobic.001G017700 diphthamide biosynthesis protein, putative, expressed K17866: diphthamide biosynthesis protein 2
12 Sobic.007G061700 vacuolar protein sorting-associated protein 18, putative, expressed -
13 Sobic.008G009600 double-stranded RNA binding motif containing protein, expressed -
14 Sobic.001G542300 expressed protein -
15 Sobic.005G216300 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
16 Sobic.010G099800 growth regulator related protein, putative, expressed -
17 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
18 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
19 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
20 Sobic.006G226300 SDA1, putative, expressed K14856: SDA1, protein SDA1


Gene co-expression network
sample Sobic001G507900 Sobic001G507900 Sobic009G213100 Sobic009G213100 Sobic001G507900--Sobic009G213100 Sobic001G138400 Sobic001G138400 Sobic001G507900--Sobic001G138400 Sobic001G226000 Sobic001G226000 Sobic001G507900--Sobic001G226000 Sobic009G040800 Sobic009G040800 Sobic001G507900--Sobic009G040800 Sobic004G232000 Sobic004G232000 Sobic001G507900--Sobic004G232000 Sobic002G127400 Sobic002G127400 Sobic001G507900--Sobic002G127400 Sobic010G278600 Sobic010G278600 Sobic001G507900--Sobic010G278600 Sobic001G335900 Sobic001G335900 Sobic001G507900--Sobic001G335900 Sobic001G393700 Sobic001G393700 Sobic001G507900--Sobic001G393700 Sobic002G409800 Sobic002G409800 Sobic009G213100--Sobic002G409800 Sobic002G076000 Sobic002G076000 Sobic009G213100--Sobic002G076000 Sobic009G213100--Sobic001G507900 Sobic001G017600 Sobic001G017600 Sobic009G213100--Sobic001G017600 Sobic009G062900 Sobic009G062900 Sobic009G213100--Sobic009G062900 Sobic003G070100 Sobic003G070100 Sobic009G213100--Sobic003G070100 Sobic002G079100 Sobic002G079100 Sobic009G213100--Sobic002G079100 Sobic006G215050 Sobic006G215050 Sobic009G213100--Sobic006G215050 Sobic006G217200 Sobic006G217200 Sobic009G213100--Sobic006G217200 Sobic001G542700 Sobic001G542700 Sobic001G138400--Sobic001G542700 Sobic003G353600 Sobic003G353600 Sobic001G138400--Sobic003G353600 Sobic002G423200 Sobic002G423200 Sobic001G138400--Sobic002G423200 Sobic008G100100 Sobic008G100100 Sobic001G138400--Sobic008G100100 Sobic003G293200 Sobic003G293200 Sobic001G138400--Sobic003G293200 Sobic007G031600 Sobic007G031600 Sobic001G138400--Sobic007G031600 Sobic005G216300 Sobic005G216300 Sobic001G138400--Sobic005G216300 Sobic009G151200 Sobic009G151200 Sobic001G138400--Sobic009G151200 Sobic007G061700 Sobic007G061700 Sobic001G138400--Sobic007G061700 Sobic009G030300 Sobic009G030300 Sobic001G226000--Sobic009G030300 Sobic006G278700 Sobic006G278700 Sobic001G226000--Sobic006G278700 Sobic006G267300 Sobic006G267300 Sobic001G226000--Sobic006G267300 Sobic003G115100 Sobic003G115100 Sobic001G226000--Sobic003G115100 Sobic002G077900 Sobic002G077900 Sobic001G226000--Sobic002G077900 Sobic009G195200 Sobic009G195200 Sobic001G226000--Sobic009G195200 Sobic003G433500 Sobic003G433500 Sobic001G226000--Sobic003G433500 Sobic001G010600 Sobic001G010600 Sobic001G226000--Sobic001G010600 Sobic004G013600 Sobic004G013600 Sobic001G226000--Sobic004G013600 Sobic009G040800--Sobic010G278600 Sobic006G091000 Sobic006G091000 Sobic009G040800--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic009G040800--Sobic005G040900 Sobic009G129600 Sobic009G129600 Sobic009G040800--Sobic009G129600 Sobic009G040800--Sobic001G335900 Sobic008G149800 Sobic008G149800 Sobic009G040800--Sobic008G149800 Sobic004G246100 Sobic004G246100 Sobic009G040800--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic009G040800--Sobic001G042200 Sobic004G353400 Sobic004G353400 Sobic009G040800--Sobic004G353400 Sobic001G087100 Sobic001G087100 Sobic004G232000--Sobic001G087100 Sobic007G043900 Sobic007G043900 Sobic004G232000--Sobic007G043900 Sobic004G232000--Sobic009G030300 Sobic004G232000--Sobic002G076000 Sobic002G259800 Sobic002G259800 Sobic004G232000--Sobic002G259800 Sobic005G084100 Sobic005G084100 Sobic004G232000--Sobic005G084100 Sobic001G043400 Sobic001G043400 Sobic004G232000--Sobic001G043400 Sobic004G232000--Sobic009G040800 Sobic005G009200 Sobic005G009200 Sobic004G232000--Sobic005G009200 Sobic001G338800 Sobic001G338800 Sobic002G127400--Sobic001G338800 Sobic003G294600 Sobic003G294600 Sobic002G127400--Sobic003G294600 Sobic003G435500 Sobic003G435500 Sobic002G127400--Sobic003G435500 Sobic002G127400--Sobic005G216300 Sobic002G127400--Sobic001G335900 Sobic001G518400 Sobic001G518400 Sobic002G127400--Sobic001G518400 Sobic009G142000 Sobic009G142000 Sobic002G127400--Sobic009G142000 Sobic010G138900 Sobic010G138900 Sobic002G127400--Sobic010G138900 Sobic003G314700 Sobic003G314700 Sobic002G127400--Sobic003G314700 Sobic010G278600--Sobic009G040800 Sobic009G074700 Sobic009G074700 Sobic010G278600--Sobic009G074700 Sobic002G408600 Sobic002G408600 Sobic010G278600--Sobic002G408600 Sobic004G285000 Sobic004G285000 Sobic010G278600--Sobic004G285000 Sobic004G236800 Sobic004G236800 Sobic010G278600--Sobic004G236800 Sobic010G278600--Sobic004G246100 Sobic010G278600--Sobic001G042200 Sobic006G131200 Sobic006G131200 Sobic010G278600--Sobic006G131200 Sobic010G278600--Sobic001G393700 Sobic001G369000 Sobic001G369000 Sobic001G335900--Sobic001G369000 Sobic006G138000 Sobic006G138000 Sobic001G335900--Sobic006G138000 Sobic001G335900--Sobic001G518400 Sobic001G170100 Sobic001G170100 Sobic001G335900--Sobic001G170100 Sobic003G240700 Sobic003G240700 Sobic001G335900--Sobic003G240700 Sobic009G229600 Sobic009G229600 Sobic001G335900--Sobic009G229600 Sobic009G049400 Sobic009G049400 Sobic001G335900--Sobic009G049400 Sobic007G120500 Sobic007G120500 Sobic001G335900--Sobic007G120500 SobicK004100 SobicK004100 Sobic001G335900--SobicK004100 Sobic002G430300 Sobic002G430300 Sobic001G393700--Sobic002G430300 Sobic001G145400 Sobic001G145400 Sobic001G393700--Sobic001G145400 Sobic010G099800 Sobic010G099800 Sobic001G393700--Sobic010G099800 Sobic005G114800 Sobic005G114800 Sobic001G393700--Sobic005G114800 Sobic006G224800 Sobic006G224800 Sobic001G393700--Sobic006G224800 Sobic001G103300 Sobic001G103300 Sobic001G393700--Sobic001G103300 Sobic003G405500 Sobic003G405500 Sobic001G393700--Sobic003G405500 Sobic001G393700--Sobic003G240700 Sobic009G045200 Sobic009G045200 Sobic001G393700--Sobic009G045200
Octagon: transcription factors


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