Gene annotation
Transcriptome id Sobic.001G542300.1,Sobic.001G542300.2
Synonym Sb01g050450
Functional annotation expressed protein
UniProt A0A1B6QR80 , A0A1B6QR70
Pfam PF13207
Panther DB PTHR33477 PTHR33477:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61450 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g01250.1 : expressed protein
MaizeGDB (Corn) Zm00025a053585
Brachypodium KQK24137
Barley HORVU4Hr1G088190.23 , HORVU4Hr1G088190.22 , HORVU4Hr1G088190.21 , HORVU4Hr1G088190.20 , HORVU4Hr1G088190.27 , HORVU4Hr1G088190.26 , HORVU4Hr1G088190.25 , HORVU4Hr1G088190.24 , HORVU4Hr1G088190.1 , HORVU4Hr1G088190.2 , HORVU4Hr1G088190.3 , HORVU4Hr1G088190.4 , HORVU4Hr1G088190.5 , HORVU4Hr1G088190.6 , HORVU4Hr1G088190.7 , HORVU4Hr1G088190.8 , HORVU4Hr1G088190.9 , HORVU4Hr1G088190.18 , HORVU4Hr1G088190.19 , HORVU4Hr1G088190.12 , HORVU4Hr1G088190.13 , HORVU4Hr1G088190.10 , HORVU4Hr1G088190.11 , HORVU4Hr1G088190.16 , HORVU4Hr1G088190.17 , HORVU4Hr1G088190.14 , HORVU4Hr1G088190.15
Wheat TraesCS4D02G362300 , TraesCS5A02G538100 , TraesCS5A02G538100 , TraesCS4B02G375000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G126300 expressed protein -
2 Sobic.004G279500 expressed protein -
3 Sobic.002G164300 ZOS9-03 - C2H2 zinc finger protein, expressed -
4 Sobic.002G357700 phospholipid-transporting ATPase 2, putative, expressed K01530: phospholipid-translocating ATPase
5 Sobic.009G088000 expressed protein -
6 Sobic.010G204400 phox domain-containing protein, putative, expressed -
7 Sobic.010G209400 WD domain, G-beta repeat domain containing protein, expressed K03130: transcription initiation factor TFIID subunit 5
8 Sobic.007G061700 vacuolar protein sorting-associated protein 18, putative, expressed -
9 Sobic.002G299100 SET domain containing protein, expressed -
10 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
11 Sobic.003G267800 ranBP1 domain containing protein, expressed K15304: Ran-binding protein 3
12 Sobic.001G138400 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
13 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
14 Sobic.001G424600 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
15 Sobic.006G082900 expressed protein -
16 Sobic.007G126500 - K14808: DDX54, ATP-dependent RNA helicase DDX54/DBP10
17 Sobic.001G010300 WD domain, G-beta repeat domain containing protein, expressed -
18 Sobic.001G507900 methyltransferase, putative, expressed K00599: methyltransferase-like protein 6
19 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
20 Sobic.005G114400 TBC domain containing protein, expressed -


Gene co-expression network
sample Sobic001G542300 Sobic001G542300 Sobic002G126300 Sobic002G126300 Sobic001G542300--Sobic002G126300 Sobic004G279500 Sobic004G279500 Sobic001G542300--Sobic004G279500 Sobic002G164300 Sobic002G164300 Sobic001G542300--Sobic002G164300 Sobic002G357700 Sobic002G357700 Sobic001G542300--Sobic002G357700 Sobic009G088000 Sobic009G088000 Sobic001G542300--Sobic009G088000 Sobic010G204400 Sobic010G204400 Sobic001G542300--Sobic010G204400 Sobic010G209400 Sobic010G209400 Sobic001G542300--Sobic010G209400 Sobic007G061700 Sobic007G061700 Sobic001G542300--Sobic007G061700 Sobic002G299100 Sobic002G299100 Sobic001G542300--Sobic002G299100 Sobic002G126300--Sobic009G088000 Sobic004G246100 Sobic004G246100 Sobic002G126300--Sobic004G246100 Sobic004G048800 Sobic004G048800 Sobic002G126300--Sobic004G048800 Sobic008G002500 Sobic008G002500 Sobic002G126300--Sobic008G002500 Sobic002G126300--Sobic010G209400 Sobic008G098300 Sobic008G098300 Sobic002G126300--Sobic008G098300 Sobic010G236400 Sobic010G236400 Sobic002G126300--Sobic010G236400 Sobic001G522600 Sobic001G522600 Sobic002G126300--Sobic001G522600 Sobic008G014500 Sobic008G014500 Sobic002G126300--Sobic008G014500 Sobic004G279500--Sobic001G542300 Sobic004G279500--Sobic002G126300 Sobic001G010300 Sobic001G010300 Sobic004G279500--Sobic001G010300 Sobic001G080900 Sobic001G080900 Sobic004G279500--Sobic001G080900 Sobic006G173100 Sobic006G173100 Sobic004G279500--Sobic006G173100 Sobic005G133500 Sobic005G133500 Sobic004G279500--Sobic005G133500 Sobic008G084700 Sobic008G084700 Sobic004G279500--Sobic008G084700 Sobic003G267800 Sobic003G267800 Sobic004G279500--Sobic003G267800 Sobic001G452000 Sobic001G452000 Sobic004G279500--Sobic001G452000 Sobic008G149800 Sobic008G149800 Sobic002G164300--Sobic008G149800 Sobic002G164300--Sobic002G357700 SobicK028600 SobicK028600 Sobic002G164300--SobicK028600 Sobic004G357100 Sobic004G357100 Sobic002G164300--Sobic004G357100 Sobic002G260400 Sobic002G260400 Sobic002G164300--Sobic002G260400 Sobic007G125000 Sobic007G125000 Sobic002G164300--Sobic007G125000 Sobic002G164300--Sobic004G246100 Sobic009G049400 Sobic009G049400 Sobic002G164300--Sobic009G049400 Sobic009G192300 Sobic009G192300 Sobic002G164300--Sobic009G192300 Sobic002G357700--Sobic008G149800 Sobic006G116100 Sobic006G116100 Sobic002G357700--Sobic006G116100 Sobic005G154500 Sobic005G154500 Sobic002G357700--Sobic005G154500 Sobic002G357700--Sobic002G164300 Sobic005G013200 Sobic005G013200 Sobic002G357700--Sobic005G013200 Sobic002G063900 Sobic002G063900 Sobic002G357700--Sobic002G063900 Sobic006G186400 Sobic006G186400 Sobic002G357700--Sobic006G186400 Sobic008G153000 Sobic008G153000 Sobic002G357700--Sobic008G153000 Sobic009G126600 Sobic009G126600 Sobic002G357700--Sobic009G126600 Sobic009G088000--Sobic008G002500 Sobic006G040800 Sobic006G040800 Sobic009G088000--Sobic006G040800 Sobic009G088000--Sobic002G126300 Sobic003G294600 Sobic003G294600 Sobic009G088000--Sobic003G294600 Sobic003G164200 Sobic003G164200 Sobic009G088000--Sobic003G164200 Sobic005G200900 Sobic005G200900 Sobic009G088000--Sobic005G200900 Sobic002G137200 Sobic002G137200 Sobic009G088000--Sobic002G137200 Sobic004G355800 Sobic004G355800 Sobic009G088000--Sobic004G355800 Sobic009G088000--Sobic010G236400 Sobic006G163800 Sobic006G163800 Sobic010G204400--Sobic006G163800 Sobic006G195700 Sobic006G195700 Sobic010G204400--Sobic006G195700 Sobic007G218000 Sobic007G218000 Sobic010G204400--Sobic007G218000 Sobic010G204400--Sobic008G153000 Sobic010G204400--Sobic010G236400 Sobic007G132100 Sobic007G132100 Sobic010G204400--Sobic007G132100 Sobic003G416700 Sobic003G416700 Sobic010G204400--Sobic003G416700 Sobic006G131000 Sobic006G131000 Sobic010G204400--Sobic006G131000 Sobic010G116600 Sobic010G116600 Sobic010G204400--Sobic010G116600 Sobic010G209400--Sobic010G236400 Sobic004G084300 Sobic004G084300 Sobic010G209400--Sobic004G084300 Sobic009G210500 Sobic009G210500 Sobic010G209400--Sobic009G210500 Sobic001G511500 Sobic001G511500 Sobic010G209400--Sobic001G511500 Sobic001G542700 Sobic001G542700 Sobic010G209400--Sobic001G542700 Sobic009G040600 Sobic009G040600 Sobic010G209400--Sobic009G040600 Sobic003G038500 Sobic003G038500 Sobic010G209400--Sobic003G038500 Sobic008G131000 Sobic008G131000 Sobic010G209400--Sobic008G131000 Sobic008G047800 Sobic008G047800 Sobic010G209400--Sobic008G047800 Sobic007G061700--Sobic008G149800 Sobic002G158700 Sobic002G158700 Sobic007G061700--Sobic002G158700 Sobic007G061700--Sobic004G246100 Sobic003G401000 Sobic003G401000 Sobic007G061700--Sobic003G401000 Sobic006G046700 Sobic006G046700 Sobic007G061700--Sobic006G046700 Sobic007G061700--Sobic001G542700 Sobic007G061700--Sobic008G153000 Sobic001G544200 Sobic001G544200 Sobic007G061700--Sobic001G544200 Sobic004G031700 Sobic004G031700 Sobic007G061700--Sobic004G031700 Sobic009G137100 Sobic009G137100 Sobic002G299100--Sobic009G137100 Sobic002G197100 Sobic002G197100 Sobic002G299100--Sobic002G197100 Sobic002G370900 Sobic002G370900 Sobic002G299100--Sobic002G370900 Sobic002G299100--Sobic004G246100 Sobic001G176200 Sobic001G176200 Sobic002G299100--Sobic001G176200 Sobic009G040800 Sobic009G040800 Sobic002G299100--Sobic009G040800 Sobic006G082900 Sobic006G082900 Sobic002G299100--Sobic006G082900 Sobic002G299100--Sobic005G154500 Sobic009G199500 Sobic009G199500 Sobic002G299100--Sobic009G199500
Octagon: transcription factors


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