Gene annotation
| Transcriptome id | Sobic.009G213100.1 |
|---|---|
| Synonym | BGAL17, Sb09g026870 |
| Functional annotation | beta-galactosidase 8 precursor, putative, expressed |
| UniProt | A0A1B6P9P7 |
| Pfam | PF01301 |
| Panther DB | PTHR23421 PTHR23421:SF13 |
| NCBI CDD | KOG0496; Beta-galactosidase |
| KEGG Orthology | K12309; GLB1, beta-galactosidase |
| Gene Ontology | GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds |
Orthologs (automatic annotation)
| TAIR | AT1G72990 : beta-galactosidase 17 |
|---|---|
| RAP-DB (Rice) | LOC_Os05g46200.1 : beta-galactosidase 8 precursor, putative, expressed |
| MaizeGDB (Corn) | Zm00025a044395 |
| Brachypodium | PNT70806 |
| Barley | HORVU1Hr1G080090.8 , HORVU1Hr1G080090.9 , HORVU1Hr1G080090.1 , HORVU1Hr1G080090.2 , HORVU1Hr1G080090.3 , HORVU1Hr1G080090.4 , HORVU1Hr1G080090.5 , HORVU1Hr1G080090.6 , HORVU1Hr1G080090.7 , HORVU1Hr1G080090.12 , HORVU1Hr1G080090.13 , HORVU1Hr1G080090.10 , HORVU1Hr1G080090.11 , HORVU1Hr1G080090.16 , HORVU1Hr1G080090.17 , HORVU1Hr1G080090.14 , HORVU1Hr1G080090.15 , HORVU1Hr1G080090.19 , HORVU1Hr1G080090.18 , HORVU1Hr1G080090.20 |
| Wheat | TraesCS1D02G363700 , TraesCS1D02G363700 , TraesCS1A02G358800 , TraesCS1A02G358800 , TraesCS1A02G358800 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G409800 | xylose isomerase, putative, expressed | K01805: xylose isomerase |
| 2 | Sobic.002G076000 | transporter-related, putative, expressed | - |
| 3 | Sobic.001G507900 | methyltransferase, putative, expressed | K00599: methyltransferase-like protein 6 |
| 4 | Sobic.001G017600 | protein of unknown function containing protein, expressed | - |
| 5 | Sobic.009G062900 | structural constituent of ribosome, putative, expressed | - |
| 6 | Sobic.003G070100 | expressed protein | - |
| 7 | Sobic.002G079100 | histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed | K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT |
| 8 | Sobic.006G215050 | - | - |
| 9 | Sobic.006G217200 | PPR repeat domain containing protein, putative, expressed | - |
| 10 | Sobic.004G232000 | TLD family protein, putative, expressed | - |
| 11 | Sobic.004G149800 | transcriptional derepression of gliadins and low-molecular-weight glutenins (LMWgs) by active demethylation of their promoters(PubMedID : 23184965)@hhH-GPD superfamily base excision DNA repair protein, expressed | - |
| 12 | Sobic.002G380100 | PPR repeat containing protein, expressed | K17964: leucine-rich PPR motif-containing protein, mitochondrial |
| 13 | Sobic.009G126000 | mannosylglycoprotein endo-beta-mannosidase, putative, expressed | K18577: mannosylglycoprotein endo-beta-mannosidase |
| 14 | Sobic.009G055400 | expressed protein | - |
| 15 | Sobic.008G133400 | unc-93 homolog A, putative, expressed | - |
| 16 | Sobic.006G056000 | OsFBL16 - F-box domain and LRR containing protein, expressed | - |
| 17 | Sobic.002G341200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed | - |
| 18 | Sobic.003G353600 | pumilio-family RNA binding protein, putative, expressed | K17943: pumilio RNA-binding family |
| 19 | Sobic.001G018100 | "qTGW3/GL3.3/TGW3(Ortholog in rice:Hu et al., 2018/Xia et al., 2018/Ying et al., 2018 )"(PubMedID : 31659830)@CGMC_GSK.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed | K03083: glycogen synthase kinase 3 beta |
| 20 | Sobic.010G278600 | FG-GAP repeat-containing protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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