Gene annotation
Transcriptome id Sobic.006G215050.1
Synonym -
Functional annotation -
UniProt A0A1Z5RFN7
Pfam PF04434 PF10551 PF03101
Panther DB PTHR31669 PTHR31669:SF56
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os04g52560.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium PNT61849 , KQJ84600 , KQJ84601 , PNT61850
Barley HORVU2Hr1G098600.3 , HORVU2Hr1G098600.2 , HORVU2Hr1G098600.1 , HORVU2Hr1G098600.5 , HORVU2Hr1G098600.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G029200 myosin heavy chain-related, putative, expressed -
2 Sobic.003G070100 expressed protein -
3 Sobic.009G142000 plus-3 domain containing protein, putative, expressed -
4 Sobic.002G076000 transporter-related, putative, expressed -
5 Sobic.003G353600 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
6 Sobic.005G191900 transporter family protein, putative, expressed -
7 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -
8 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
9 Sobic.006G138000 expressed protein -
10 Sobic.010G147833 - -
11 Sobic.007G019300 adaptin, putative, expressed K12397: AP-3 complex subunit beta
12 Sobic.002G164800 SET domain containing protein, expressed K11423: [histone H3]-dimethyl-L-lysine36 N-methyltransferase
13 Sobic.009G213100 beta-galactosidase 8 precursor, putative, expressed K12309: GLB1, beta-galactosidase
14 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
15 Sobic.003G294600 Homeobox domain containing protein, expressed -
16 Sobic.002G127200 CRAL/TRIO domain containing protein, expressed -
17 Sobic.008G131000 domain of unknown function family protein, expressed -
18 Sobic.006G056000 OsFBL16 - F-box domain and LRR containing protein, expressed -
19 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
20 Sobic.006G185200 RNA polymerase IV subunit, putative, expressed K16250: DNA-directed RNA polymerase IV subunit 1


Gene co-expression network
sample Sobic006G215050 Sobic006G215050 Sobic007G029200 Sobic007G029200 Sobic006G215050--Sobic007G029200 Sobic003G070100 Sobic003G070100 Sobic006G215050--Sobic003G070100 Sobic009G142000 Sobic009G142000 Sobic006G215050--Sobic009G142000 Sobic002G076000 Sobic002G076000 Sobic006G215050--Sobic002G076000 Sobic003G353600 Sobic003G353600 Sobic006G215050--Sobic003G353600 Sobic005G191900 Sobic005G191900 Sobic006G215050--Sobic005G191900 Sobic001G170100 Sobic001G170100 Sobic006G215050--Sobic001G170100 Sobic004G086200 Sobic004G086200 Sobic006G215050--Sobic004G086200 Sobic006G138000 Sobic006G138000 Sobic006G215050--Sobic006G138000 Sobic007G029200--Sobic005G191900 Sobic007G029200--Sobic009G142000 Sobic007G029200--Sobic006G215050 Sobic001G167200 Sobic001G167200 Sobic007G029200--Sobic001G167200 Sobic004G085000 Sobic004G085000 Sobic007G029200--Sobic004G085000 Sobic008G002500 Sobic008G002500 Sobic007G029200--Sobic008G002500 Sobic001G134300 Sobic001G134300 Sobic007G029200--Sobic001G134300 Sobic002G317200 Sobic002G317200 Sobic007G029200--Sobic002G317200 Sobic001G352900 Sobic001G352900 Sobic007G029200--Sobic001G352900 Sobic003G070100--Sobic005G191900 Sobic009G100050 Sobic009G100050 Sobic003G070100--Sobic009G100050 Sobic010G152850 Sobic010G152850 Sobic003G070100--Sobic010G152850 Sobic009G005100 Sobic009G005100 Sobic003G070100--Sobic009G005100 Sobic010G166000 Sobic010G166000 Sobic003G070100--Sobic010G166000 Sobic009G247400 Sobic009G247400 Sobic003G070100--Sobic009G247400 Sobic003G070100--Sobic002G076000 Sobic008G149800 Sobic008G149800 Sobic003G070100--Sobic008G149800 Sobic006G059200 Sobic006G059200 Sobic003G070100--Sobic006G059200 Sobic003G294600 Sobic003G294600 Sobic009G142000--Sobic003G294600 Sobic001G451300 Sobic001G451300 Sobic009G142000--Sobic001G451300 Sobic009G142000--Sobic004G085000 Sobic009G142000--Sobic007G029200 Sobic001G453000 Sobic001G453000 Sobic009G142000--Sobic001G453000 Sobic003G123100 Sobic003G123100 Sobic009G142000--Sobic003G123100 Sobic008G132000 Sobic008G132000 Sobic009G142000--Sobic008G132000 Sobic005G200900 Sobic005G200900 Sobic009G142000--Sobic005G200900 Sobic001G536000 Sobic001G536000 Sobic009G142000--Sobic001G536000 Sobic006G056000 Sobic006G056000 Sobic002G076000--Sobic006G056000 Sobic005G084100 Sobic005G084100 Sobic002G076000--Sobic005G084100 Sobic002G076000--Sobic003G353600 Sobic002G076000--Sobic003G070100 Sobic002G076000--Sobic009G100050 Sobic004G232000 Sobic004G232000 Sobic002G076000--Sobic004G232000 Sobic004G325400 Sobic004G325400 Sobic002G076000--Sobic004G325400 Sobic009G213100 Sobic009G213100 Sobic002G076000--Sobic009G213100 Sobic010G083000 Sobic010G083000 Sobic002G076000--Sobic010G083000 Sobic003G353600--Sobic006G056000 Sobic001G138400 Sobic001G138400 Sobic003G353600--Sobic001G138400 Sobic002G423200 Sobic002G423200 Sobic003G353600--Sobic002G423200 Sobic003G353600--Sobic004G086200 Sobic003G353600--Sobic002G076000 Sobic003G353600--Sobic010G083000 Sobic007G031600 Sobic007G031600 Sobic003G353600--Sobic007G031600 Sobic008G131000 Sobic008G131000 Sobic003G353600--Sobic008G131000 Sobic004G285000 Sobic004G285000 Sobic003G353600--Sobic004G285000 Sobic001G311500 Sobic001G311500 Sobic005G191900--Sobic001G311500 Sobic001G363500 Sobic001G363500 Sobic005G191900--Sobic001G363500 Sobic010G094700 Sobic010G094700 Sobic005G191900--Sobic010G094700 Sobic005G191900--Sobic009G247400 Sobic010G112100 Sobic010G112100 Sobic005G191900--Sobic010G112100 Sobic007G157000 Sobic007G157000 Sobic005G191900--Sobic007G157000 Sobic006G118700 Sobic006G118700 Sobic005G191900--Sobic006G118700 Sobic008G028700 Sobic008G028700 Sobic005G191900--Sobic008G028700 Sobic005G191900--Sobic008G002500 Sobic001G170100--Sobic006G138000 Sobic001G518400 Sobic001G518400 Sobic001G170100--Sobic001G518400 Sobic001G426600 Sobic001G426600 Sobic001G170100--Sobic001G426600 Sobic001G335900 Sobic001G335900 Sobic001G170100--Sobic001G335900 Sobic001G369000 Sobic001G369000 Sobic001G170100--Sobic001G369000 Sobic010G275500 Sobic010G275500 Sobic001G170100--Sobic010G275500 Sobic003G240700 Sobic003G240700 Sobic001G170100--Sobic003G240700 Sobic010G147833 Sobic010G147833 Sobic001G170100--Sobic010G147833 Sobic007G019300 Sobic007G019300 Sobic001G170100--Sobic007G019300 Sobic001G346900 Sobic001G346900 Sobic004G086200--Sobic001G346900 Sobic004G086200--Sobic004G285000 Sobic004G086200--Sobic001G134300 Sobic001G245900 Sobic001G245900 Sobic004G086200--Sobic001G245900 Sobic001G306900 Sobic001G306900 Sobic004G086200--Sobic001G306900 Sobic010G096000 Sobic010G096000 Sobic004G086200--Sobic010G096000 Sobic010G279900 Sobic010G279900 Sobic004G086200--Sobic010G279900 Sobic001G246500 Sobic001G246500 Sobic004G086200--Sobic001G246500 Sobic010G065300 Sobic010G065300 Sobic004G086200--Sobic010G065300 Sobic006G138000--Sobic001G170100 Sobic006G138000--Sobic001G518400 Sobic006G138000--Sobic001G335900 Sobic006G138000--Sobic001G369000 Sobic006G138000--Sobic010G275500 Sobic006G138000--Sobic003G240700 Sobic003G187500 Sobic003G187500 Sobic006G138000--Sobic003G187500 Sobic006G138000--Sobic001G426600 Sobic010G053800 Sobic010G053800 Sobic006G138000--Sobic010G053800
Octagon: transcription factors


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