Gene annotation
Transcriptome id Sobic.002G127200.6,Sobic.002G127200.3,Sobic.002G127200.4,Sobic.002G127200.9,Sobic.002G127200.5,Sobic.002G127200.2,Sobic.002G127200.7,Sobic.002G127200.8
Synonym
Functional annotation CRAL/TRIO domain containing protein, expressed
UniProt A0A1W0W3K0 , A0A1W0W3L0 , A0A1W0W3J0
Pfam PF00650
Panther DB PTHR23324 PTHR23324:SF78
NCBI CDD KOG1471; Phosphatidylinositol transfer protein SEC14 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47510 : Sec14p-like phosphatidylinositol transfer family protein
RAP-DB (Rice) LOC_Os07g27310.1 : CRAL/TRIO domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045857
Brachypodium KQK16415 , KQK16414 , PNT75207
Barley HORVU2Hr1G111160.43 , HORVU2Hr1G111160.42 , HORVU2Hr1G111160.41 , HORVU2Hr1G111160.40 , HORVU2Hr1G111160.47 , HORVU2Hr1G111160.46 , HORVU2Hr1G111160.45 , HORVU2Hr1G111160.44 , HORVU2Hr1G111160.49 , HORVU2Hr1G111160.48 , HORVU2Hr1G111160.8 , HORVU2Hr1G111160.18 , HORVU2Hr1G111160.19 , HORVU2Hr1G111160.14 , HORVU2Hr1G111160.15 , HORVU2Hr1G111160.16 , HORVU2Hr1G111160.17 , HORVU2Hr1G111160.10 , HORVU2Hr1G111160.11 , HORVU2Hr1G111160.12 , HORVU2Hr1G111160.13 , HORVU2Hr1G111160.6 , HORVU2Hr1G111160.7 , HORVU2Hr1G111160.4 , HORVU2Hr1G111160.5 , HORVU2Hr1G111160.2 , HORVU2Hr1G111160.3 , HORVU2Hr1G111160.1 , HORVU2Hr1G111160.9 , HORVU2Hr1G111160.21 , HORVU2Hr1G111160.20 , HORVU2Hr1G111160.23 , HORVU2Hr1G111160.22 , HORVU2Hr1G111160.25 , HORVU2Hr1G111160.24 , HORVU2Hr1G111160.27 , HORVU2Hr1G111160.26 , HORVU2Hr1G111160.29 , HORVU2Hr1G111160.28 , HORVU2Hr1G111160.36 , HORVU2Hr1G111160.37 , HORVU2Hr1G111160.34 , HORVU2Hr1G111160.35 , HORVU2Hr1G111160.32 , HORVU2Hr1G111160.33 , HORVU2Hr1G111160.30 , HORVU2Hr1G111160.31 , HORVU2Hr1G111160.38 , HORVU2Hr1G111160.39
Wheat TraesCS2A02G499900 , TraesCS2A02G499900 , TraesCS2A02G499900 , TraesCS2A02G499900 , TraesCS2D02G500100 , TraesCS2D02G500100 , TraesCS2D02G500100 , TraesCS2D02G500100 , TraesCS2B02G527900 , TraesCS2B02G527900 , TraesCS2B02G527900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
2 Sobic.006G154100 mRNA cap guanine-N7 methyltransferase 2, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
3 Sobic.005G108000 - -
4 Sobic.010G080550 - -
5 Sobic.003G312700 glycosyl hydrolase family 47 domain contain protein, expressed K10085: ER degradation enhancer, mannosidase alpha-like 2
6 Sobic.004G085000 expressed protein K14310: NUP205, nuclear pore complex protein Nup205
7 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
8 Sobic.003G416700 homeobox domain containing protein, expressed -
9 Sobic.003G230600 transcription factor X1, putative, expressed -
10 Sobic.006G080400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11851: ubiquitin carboxyl-terminal hydrolase 30
11 Sobic.001G034500 SEC14 cytosolic factor family protein, putative, expressed -
12 Sobic.006G245900 FAR1 family protein, expressed -
13 Sobic.002G422100 EMB1011, putative, expressed K14317: NUP214, nuclear pore complex protein Nup214
14 Sobic.002G405500 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11841: USP10, ubiquitin carboxyl-terminal hydrolase 10
15 Sobic.001G004100 WD domain, G-beta repeat domain containing protein, expressed -
16 Sobic.010G262100 expressed protein -
17 Sobic.007G102500 - -
18 Sobic.003G042400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
19 Sobic.002G148400 histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed -
20 Sobic.004G224600 expressed protein -


Gene co-expression network
sample Sobic002G127200 Sobic002G127200 Sobic001G346900 Sobic001G346900 Sobic002G127200--Sobic001G346900 Sobic006G154100 Sobic006G154100 Sobic002G127200--Sobic006G154100 Sobic005G108000 Sobic005G108000 Sobic002G127200--Sobic005G108000 Sobic010G080550 Sobic010G080550 Sobic002G127200--Sobic010G080550 Sobic003G312700 Sobic003G312700 Sobic002G127200--Sobic003G312700 Sobic004G085000 Sobic004G085000 Sobic002G127200--Sobic004G085000 Sobic004G086200 Sobic004G086200 Sobic002G127200--Sobic004G086200 Sobic003G416700 Sobic003G416700 Sobic002G127200--Sobic003G416700 Sobic003G230600 Sobic003G230600 Sobic002G127200--Sobic003G230600 Sobic001G346900--Sobic004G086200 Sobic003G409200 Sobic003G409200 Sobic001G346900--Sobic003G409200 Sobic001G134300 Sobic001G134300 Sobic001G346900--Sobic001G134300 Sobic003G042400 Sobic003G042400 Sobic001G346900--Sobic003G042400 Sobic008G147200 Sobic008G147200 Sobic001G346900--Sobic008G147200 Sobic004G285000 Sobic004G285000 Sobic001G346900--Sobic004G285000 Sobic001G346900--Sobic003G416700 Sobic010G096000 Sobic010G096000 Sobic001G346900--Sobic010G096000 Sobic002G422100 Sobic002G422100 Sobic001G346900--Sobic002G422100 Sobic006G154100--Sobic002G127200 Sobic001G034500 Sobic001G034500 Sobic006G154100--Sobic001G034500 Sobic005G114500 Sobic005G114500 Sobic006G154100--Sobic005G114500 Sobic001G097500 Sobic001G097500 Sobic006G154100--Sobic001G097500 Sobic006G270600 Sobic006G270600 Sobic006G154100--Sobic006G270600 Sobic006G002800 Sobic006G002800 Sobic006G154100--Sobic006G002800 Sobic006G154100--Sobic003G230600 Sobic004G017300 Sobic004G017300 Sobic006G154100--Sobic004G017300 Sobic003G006400 Sobic003G006400 Sobic006G154100--Sobic003G006400 Sobic005G108000--Sobic001G346900 Sobic005G108000--Sobic002G127200 Sobic004G224600 Sobic004G224600 Sobic005G108000--Sobic004G224600 Sobic006G178100 Sobic006G178100 Sobic005G108000--Sobic006G178100 Sobic002G171300 Sobic002G171300 Sobic005G108000--Sobic002G171300 Sobic009G211200 Sobic009G211200 Sobic005G108000--Sobic009G211200 Sobic005G108000--Sobic010G080550 Sobic005G108000--Sobic006G002800 Sobic006G245900 Sobic006G245900 Sobic005G108000--Sobic006G245900 Sobic009G098300 Sobic009G098300 Sobic010G080550--Sobic009G098300 Sobic010G080550--Sobic002G127200 Sobic001G014300 Sobic001G014300 Sobic010G080550--Sobic001G014300 Sobic010G080550--Sobic005G108000 Sobic004G149700 Sobic004G149700 Sobic010G080550--Sobic004G149700 Sobic006G216200 Sobic006G216200 Sobic010G080550--Sobic006G216200 Sobic004G223300 Sobic004G223300 Sobic010G080550--Sobic004G223300 Sobic001G245000 Sobic001G245000 Sobic010G080550--Sobic001G245000 Sobic010G080550--Sobic006G154100 Sobic001G087600 Sobic001G087600 Sobic003G312700--Sobic001G087600 Sobic003G312700--Sobic001G014300 Sobic003G405500 Sobic003G405500 Sobic003G312700--Sobic003G405500 Sobic004G141800 Sobic004G141800 Sobic003G312700--Sobic004G141800 Sobic002G430300 Sobic002G430300 Sobic003G312700--Sobic002G430300 Sobic004G355800 Sobic004G355800 Sobic003G312700--Sobic004G355800 Sobic003G152400 Sobic003G152400 Sobic003G312700--Sobic003G152400 Sobic002G063900 Sobic002G063900 Sobic003G312700--Sobic002G063900 Sobic008G140700 Sobic008G140700 Sobic003G312700--Sobic008G140700 Sobic001G145400 Sobic001G145400 Sobic004G085000--Sobic001G145400 Sobic010G114900 Sobic010G114900 Sobic004G085000--Sobic010G114900 Sobic006G185200 Sobic006G185200 Sobic004G085000--Sobic006G185200 Sobic003G199300 Sobic003G199300 Sobic004G085000--Sobic003G199300 Sobic005G010900 Sobic005G010900 Sobic004G085000--Sobic005G010900 Sobic001G219900 Sobic001G219900 Sobic004G085000--Sobic001G219900 Sobic004G085000--Sobic002G430300 Sobic009G101200 Sobic009G101200 Sobic004G085000--Sobic009G101200 Sobic006G086600 Sobic006G086600 Sobic004G085000--Sobic006G086600 Sobic004G086200--Sobic001G346900 Sobic004G086200--Sobic004G285000 Sobic004G086200--Sobic001G134300 Sobic001G245900 Sobic001G245900 Sobic004G086200--Sobic001G245900 Sobic001G306900 Sobic001G306900 Sobic004G086200--Sobic001G306900 Sobic004G086200--Sobic010G096000 Sobic010G279900 Sobic010G279900 Sobic004G086200--Sobic010G279900 Sobic001G246500 Sobic001G246500 Sobic004G086200--Sobic001G246500 Sobic010G065300 Sobic010G065300 Sobic004G086200--Sobic010G065300 Sobic002G154000 Sobic002G154000 Sobic003G416700--Sobic002G154000 Sobic002G264200 Sobic002G264200 Sobic003G416700--Sobic002G264200 Sobic001G461400 Sobic001G461400 Sobic003G416700--Sobic001G461400 Sobic007G183900 Sobic007G183900 Sobic003G416700--Sobic007G183900 Sobic001G051700 Sobic001G051700 Sobic003G416700--Sobic001G051700 Sobic003G360400 Sobic003G360400 Sobic003G416700--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic003G416700--Sobic009G119000 Sobic001G063700 Sobic001G063700 Sobic003G416700--Sobic001G063700 Sobic010G275500 Sobic010G275500 Sobic003G416700--Sobic010G275500 Sobic003G230600--Sobic005G114500 Sobic001G125500 Sobic001G125500 Sobic003G230600--Sobic001G125500 Sobic009G128500 Sobic009G128500 Sobic003G230600--Sobic009G128500 Sobic001G308400 Sobic001G308400 Sobic003G230600--Sobic001G308400 Sobic007G145400 Sobic007G145400 Sobic003G230600--Sobic007G145400 Sobic008G092800 Sobic008G092800 Sobic003G230600--Sobic008G092800 Sobic003G143800 Sobic003G143800 Sobic003G230600--Sobic003G143800 Sobic002G363800 Sobic002G363800 Sobic003G230600--Sobic002G363800 Sobic003G230600--Sobic001G097500
Octagon: transcription factors


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