Gene annotation
Transcriptome id Sobic.004G224600.2,Sobic.004G224600.1
Synonym Sb04g026890
Functional annotation expressed protein
UniProt A0A194YR68 , C5XY67
Pfam -
Panther DB PTHR33524 PTHR33524:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23200 : -
RAP-DB (Rice) LOC_Os02g42300.1 : expressed protein
MaizeGDB (Corn) Zm00025a021040
Brachypodium KQK00463 , KQK00462
Barley HORVU6Hr1G059530.14 , HORVU6Hr1G059530.15 , HORVU6Hr1G059530.10 , HORVU6Hr1G059530.11 , HORVU6Hr1G059530.12 , HORVU6Hr1G059530.13 , HORVU6Hr1G059530.8 , HORVU6Hr1G059530.9 , HORVU6Hr1G059530.6 , HORVU6Hr1G059530.7 , HORVU6Hr1G059530.4 , HORVU6Hr1G059530.5 , HORVU6Hr1G059530.2 , HORVU6Hr1G059530.3 , HORVU6Hr1G059530.1
Wheat TraesCS6B02G261800 , TraesCS6A02G220300 , TraesCS6D02G214900
Populus PNT35760


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G002800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K15332: tRNA (uracil-5-)-methyltransferase
2 Sobic.003G146600 pumilio-family RNA binding repeat containing protein, expressed K14790: nucleolar protein 9
3 Sobic.001G376900 utp14 protein, putative, expressed K14567: U3 small nucleolar RNA-associated protein 14
4 Sobic.006G125500 expressed protein -
5 Sobic.002G235200 PPR repeat domain containing protein, putative, expressed -
6 Sobic.009G246500 N-acetyltransferase 10, putative, expressed K14521: NAT10, N-acetyltransferase 10
7 Sobic.003G042400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
8 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
9 Sobic.006G086600 IKI3 family protein, expressed K11373: ELP1, IKI3, elongator complex protein 1
10 Sobic.006G178100 coiled-coil domain-containing protein 139, putative, expressed K07583: tRNA pseudouridine synthase 10
11 Sobic.003G006400 metallo-beta-lactamase family protein, putative, expressed K00784: ribonuclease Z
12 Sobic.008G160000 tetratricopeptide repeat domain containing protein, expressed -
13 Sobic.005G026400 pentatricopeptide repeat domain containing protein, putative, expressed -
14 Sobic.008G147200 tubulin, putative, expressed -
15 Sobic.001G393900 FAD binding domain containing protein, expressed -
16 Sobic.009G211200 tRNAHis guanylyltransferase family protein, expressed K10761: tRNA(His) guanylyltransferase
17 Sobic.009G101200 expressed protein K17973: NAA25, N-terminal acetyltransferase B complex non-catalytic subunit
18 Sobic.003G308500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
19 Sobic.005G108000 - -
20 Sobic.001G259000 initiation factor 2 subunit family domain containing protein, expressed K03754: translation initiation factor eIF-2B subunit beta


Gene co-expression network
sample Sobic004G224600 Sobic004G224600 Sobic006G002800 Sobic006G002800 Sobic004G224600--Sobic006G002800 Sobic003G146600 Sobic003G146600 Sobic004G224600--Sobic003G146600 Sobic001G376900 Sobic001G376900 Sobic004G224600--Sobic001G376900 Sobic006G125500 Sobic006G125500 Sobic004G224600--Sobic006G125500 Sobic002G235200 Sobic002G235200 Sobic004G224600--Sobic002G235200 Sobic009G246500 Sobic009G246500 Sobic004G224600--Sobic009G246500 Sobic003G042400 Sobic003G042400 Sobic004G224600--Sobic003G042400 Sobic001G145400 Sobic001G145400 Sobic004G224600--Sobic001G145400 Sobic006G086600 Sobic006G086600 Sobic004G224600--Sobic006G086600 Sobic003G308500 Sobic003G308500 Sobic006G002800--Sobic003G308500 Sobic006G002800--Sobic004G224600 Sobic002G150700 Sobic002G150700 Sobic006G002800--Sobic002G150700 Sobic006G002800--Sobic001G145400 Sobic006G002800--Sobic003G146600 Sobic010G007100 Sobic010G007100 Sobic006G002800--Sobic010G007100 Sobic004G321700 Sobic004G321700 Sobic006G002800--Sobic004G321700 Sobic009G234700 Sobic009G234700 Sobic006G002800--Sobic009G234700 Sobic008G147200 Sobic008G147200 Sobic006G002800--Sobic008G147200 Sobic003G146600--Sobic003G308500 Sobic003G146600--Sobic004G224600 Sobic003G146600--Sobic006G002800 Sobic003G146600--Sobic002G235200 Sobic003G146600--Sobic001G145400 Sobic003G146600--Sobic002G150700 Sobic001G065100 Sobic001G065100 Sobic003G146600--Sobic001G065100 Sobic003G039000 Sobic003G039000 Sobic003G146600--Sobic003G039000 Sobic003G012000 Sobic003G012000 Sobic003G146600--Sobic003G012000 Sobic001G376900--Sobic003G042400 Sobic001G453400 Sobic001G453400 Sobic001G376900--Sobic001G453400 Sobic007G126500 Sobic007G126500 Sobic001G376900--Sobic007G126500 Sobic001G376900--Sobic006G086600 Sobic009G158100 Sobic009G158100 Sobic001G376900--Sobic009G158100 Sobic007G168300 Sobic007G168300 Sobic001G376900--Sobic007G168300 Sobic001G376900--Sobic004G224600 Sobic001G052400 Sobic001G052400 Sobic001G376900--Sobic001G052400 Sobic001G393900 Sobic001G393900 Sobic001G376900--Sobic001G393900 Sobic006G125500--Sobic003G308500 Sobic006G125500--Sobic004G224600 Sobic006G125500--Sobic006G002800 Sobic006G125500--Sobic003G146600 Sobic002G371600 Sobic002G371600 Sobic006G125500--Sobic002G371600 Sobic010G080700 Sobic010G080700 Sobic006G125500--Sobic010G080700 Sobic004G332400 Sobic004G332400 Sobic006G125500--Sobic004G332400 Sobic007G155500 Sobic007G155500 Sobic006G125500--Sobic007G155500 Sobic005G010900 Sobic005G010900 Sobic006G125500--Sobic005G010900 Sobic002G235200--Sobic006G086600 Sobic001G089600 Sobic001G089600 Sobic002G235200--Sobic001G089600 Sobic002G235200--Sobic001G145400 Sobic010G059500 Sobic010G059500 Sobic002G235200--Sobic010G059500 Sobic002G235200--Sobic003G146600 Sobic006G166200 Sobic006G166200 Sobic002G235200--Sobic006G166200 Sobic003G036400 Sobic003G036400 Sobic002G235200--Sobic003G036400 Sobic004G320500 Sobic004G320500 Sobic002G235200--Sobic004G320500 Sobic002G235200--Sobic004G224600 Sobic008G049100 Sobic008G049100 Sobic009G246500--Sobic008G049100 Sobic010G205900 Sobic010G205900 Sobic009G246500--Sobic010G205900 Sobic003G123200 Sobic003G123200 Sobic009G246500--Sobic003G123200 Sobic008G163500 Sobic008G163500 Sobic009G246500--Sobic008G163500 Sobic005G098800 Sobic005G098800 Sobic009G246500--Sobic005G098800 Sobic002G071400 Sobic002G071400 Sobic009G246500--Sobic002G071400 Sobic002G423400 Sobic002G423400 Sobic009G246500--Sobic002G423400 Sobic009G246500--Sobic004G224600 Sobic009G101200 Sobic009G101200 Sobic009G246500--Sobic009G101200 Sobic003G042400--Sobic007G168300 Sobic003G042400--Sobic001G376900 Sobic001G346900 Sobic001G346900 Sobic003G042400--Sobic001G346900 Sobic003G042400--Sobic009G158100 Sobic003G042400--Sobic001G145400 Sobic003G042400--Sobic001G052400 Sobic003G042400--Sobic008G147200 Sobic009G255600 Sobic009G255600 Sobic003G042400--Sobic009G255600 Sobic003G042400--Sobic007G126500 Sobic001G145400--Sobic006G086600 Sobic001G035200 Sobic001G035200 Sobic001G145400--Sobic001G035200 Sobic001G145400--Sobic010G059500 Sobic006G077200 Sobic006G077200 Sobic001G145400--Sobic006G077200 Sobic003G405500 Sobic003G405500 Sobic001G145400--Sobic003G405500 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic009G084900 Sobic009G084900 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000 Sobic010G003400 Sobic010G003400 Sobic006G086600--Sobic010G003400 Sobic006G086600--Sobic001G145400 Sobic006G086600--Sobic001G089600 Sobic006G086600--Sobic009G101200 Sobic006G086600--Sobic001G453400 Sobic006G086600--Sobic004G320500 Sobic006G086600--Sobic002G235200 Sobic007G220300 Sobic007G220300 Sobic006G086600--Sobic007G220300 Sobic006G086600--Sobic010G007100
Octagon: transcription factors


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