Gene annotation
Transcriptome id Sobic.009G101200.1
Synonym Sb09g015940
Functional annotation expressed protein
UniProt A0A1B6P7U8
Pfam PF13371 PF09797
Panther DB PTHR22767 PTHR22767:SF3
NCBI CDD KOG2053; Mitochondrial inheritance and actin cytoskeleton organization protein
KEGG Orthology K17973; NAA25, N-terminal acetyltransferase B complex non-catalytic subunit
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58450 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os05g27870.1 : expressed protein
MaizeGDB (Corn) Zm00025a043464
Brachypodium KQK06807 , KQK06806 , KQK06805 , KQK06804 , KQK06809 , KQK06808 , PNT71516
Barley HORVU1Hr1G051570.11 , HORVU1Hr1G051570.10 , HORVU1Hr1G051570.13 , HORVU1Hr1G051570.12 , HORVU1Hr1G051570.15 , HORVU1Hr1G051570.14 , HORVU1Hr1G051570.16 , HORVU1Hr1G051570.9 , HORVU1Hr1G051570.8 , HORVU1Hr1G051570.5 , HORVU1Hr1G051570.4 , HORVU1Hr1G051570.7 , HORVU1Hr1G051570.6 , HORVU1Hr1G051570.1 , HORVU1Hr1G051570.3 , HORVU1Hr1G051570.2
Wheat TraesCS1A02G199000 , TraesCS1A02G199000 , TraesCS1A02G199000 , TraesCS1B02G214000 , TraesCS1B02G214000 , TraesCS1B02G214000 , TraesCS1D02G202800 , TraesCS1D02G202800 , TraesCS1D02G202800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G086600 IKI3 family protein, expressed K11373: ELP1, IKI3, elongator complex protein 1
2 Sobic.010G003400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
3 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
4 Sobic.001G259000 initiation factor 2 subunit family domain containing protein, expressed K03754: translation initiation factor eIF-2B subunit beta
5 Sobic.004G085000 expressed protein K14310: NUP205, nuclear pore complex protein Nup205
6 Sobic.001G052400 RNA recognition motif containing protein, putative, expressed K14573: NOP4, nucleolar protein 4
7 Sobic.009G246500 N-acetyltransferase 10, putative, expressed K14521: NAT10, N-acetyltransferase 10
8 Sobic.001G429600 HEAT repeat family protein, putative, expressed -
9 Sobic.006G049600 methyltransferase domain containing protein, expressed -
10 Sobic.008G160000 tetratricopeptide repeat domain containing protein, expressed -
11 Sobic.004G030800 expressed protein -
12 Sobic.004G224600 expressed protein -
13 Sobic.006G125900 elongator complex protein 3, putative, expressed K07739: ELP3, elongator complex protein 3
14 Sobic.002G299400 PPR repeat domain containing protein, putative, expressed -
15 Sobic.009G234700 protein of unknown function DUF1296 domain containing protein, expressed -
16 Sobic.009G211200 tRNAHis guanylyltransferase family protein, expressed K10761: tRNA(His) guanylyltransferase
17 Sobic.003G199300 down-regulated in metastasis family protein, expressed K14772: U3 small nucleolar RNA-associated protein 20
18 Sobic.001G401500 programmed cell death protein 2, putative, expressed K14801: pre-rRNA-processing protein TSR4
19 Sobic.007G220300 WD domain, G-beta repeat domain containing protein, expressed K11374: elongator complex protein 2
20 Sobic.001G017700 diphthamide biosynthesis protein, putative, expressed K17866: diphthamide biosynthesis protein 2


Gene co-expression network
sample Sobic009G101200 Sobic009G101200 Sobic006G086600 Sobic006G086600 Sobic009G101200--Sobic006G086600 Sobic010G003400 Sobic010G003400 Sobic009G101200--Sobic010G003400 Sobic001G145400 Sobic001G145400 Sobic009G101200--Sobic001G145400 Sobic001G259000 Sobic001G259000 Sobic009G101200--Sobic001G259000 Sobic004G085000 Sobic004G085000 Sobic009G101200--Sobic004G085000 Sobic001G052400 Sobic001G052400 Sobic009G101200--Sobic001G052400 Sobic009G246500 Sobic009G246500 Sobic009G101200--Sobic009G246500 Sobic001G429600 Sobic001G429600 Sobic009G101200--Sobic001G429600 Sobic006G049600 Sobic006G049600 Sobic009G101200--Sobic006G049600 Sobic006G086600--Sobic010G003400 Sobic006G086600--Sobic001G145400 Sobic001G089600 Sobic001G089600 Sobic006G086600--Sobic001G089600 Sobic006G086600--Sobic009G101200 Sobic001G453400 Sobic001G453400 Sobic006G086600--Sobic001G453400 Sobic004G320500 Sobic004G320500 Sobic006G086600--Sobic004G320500 Sobic002G235200 Sobic002G235200 Sobic006G086600--Sobic002G235200 Sobic007G220300 Sobic007G220300 Sobic006G086600--Sobic007G220300 Sobic010G007100 Sobic010G007100 Sobic006G086600--Sobic010G007100 Sobic010G003400--Sobic006G086600 Sobic010G003400--Sobic001G453400 Sobic010G003400--Sobic001G052400 Sobic010G003400--Sobic009G101200 Sobic003G260400 Sobic003G260400 Sobic010G003400--Sobic003G260400 Sobic001G004400 Sobic001G004400 Sobic010G003400--Sobic001G004400 Sobic010G003400--Sobic004G320500 Sobic010G003400--Sobic001G089600 Sobic004G030800 Sobic004G030800 Sobic010G003400--Sobic004G030800 Sobic001G145400--Sobic006G086600 Sobic001G035200 Sobic001G035200 Sobic001G145400--Sobic001G035200 Sobic010G059500 Sobic010G059500 Sobic001G145400--Sobic010G059500 Sobic006G077200 Sobic006G077200 Sobic001G145400--Sobic006G077200 Sobic003G405500 Sobic003G405500 Sobic001G145400--Sobic003G405500 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic009G084900 Sobic009G084900 Sobic001G145400--Sobic009G084900 Sobic001G145400--Sobic004G085000 Sobic009G143800 Sobic009G143800 Sobic001G259000--Sobic009G143800 Sobic004G156800 Sobic004G156800 Sobic001G259000--Sobic004G156800 Sobic006G270600 Sobic006G270600 Sobic001G259000--Sobic006G270600 Sobic001G259000--Sobic009G101200 Sobic001G259000--Sobic001G145400 Sobic008G160000 Sobic008G160000 Sobic001G259000--Sobic008G160000 Sobic007G039400 Sobic007G039400 Sobic001G259000--Sobic007G039400 Sobic001G259000--Sobic004G340400 Sobic009G138700 Sobic009G138700 Sobic001G259000--Sobic009G138700 Sobic004G085000--Sobic001G145400 Sobic010G114900 Sobic010G114900 Sobic004G085000--Sobic010G114900 Sobic006G185200 Sobic006G185200 Sobic004G085000--Sobic006G185200 Sobic003G199300 Sobic003G199300 Sobic004G085000--Sobic003G199300 Sobic005G010900 Sobic005G010900 Sobic004G085000--Sobic005G010900 Sobic001G219900 Sobic001G219900 Sobic004G085000--Sobic001G219900 Sobic002G430300 Sobic002G430300 Sobic004G085000--Sobic002G430300 Sobic004G085000--Sobic009G101200 Sobic004G085000--Sobic006G086600 Sobic001G052400--Sobic004G320500 Sobic001G052400--Sobic010G003400 Sobic001G052400--Sobic001G453400 Sobic007G217100 Sobic007G217100 Sobic001G052400--Sobic007G217100 Sobic003G042400 Sobic003G042400 Sobic001G052400--Sobic003G042400 Sobic001G052400--Sobic004G340400 Sobic001G052400--Sobic006G086600 Sobic010G174700 Sobic010G174700 Sobic001G052400--Sobic010G174700 Sobic006G125900 Sobic006G125900 Sobic001G052400--Sobic006G125900 Sobic008G049100 Sobic008G049100 Sobic009G246500--Sobic008G049100 Sobic010G205900 Sobic010G205900 Sobic009G246500--Sobic010G205900 Sobic003G123200 Sobic003G123200 Sobic009G246500--Sobic003G123200 Sobic008G163500 Sobic008G163500 Sobic009G246500--Sobic008G163500 Sobic005G098800 Sobic005G098800 Sobic009G246500--Sobic005G098800 Sobic002G071400 Sobic002G071400 Sobic009G246500--Sobic002G071400 Sobic002G423400 Sobic002G423400 Sobic009G246500--Sobic002G423400 Sobic004G224600 Sobic004G224600 Sobic009G246500--Sobic004G224600 Sobic009G246500--Sobic009G101200 Sobic001G429600--Sobic003G199300 Sobic002G372500 Sobic002G372500 Sobic001G429600--Sobic002G372500 Sobic001G429600--Sobic009G101200 Sobic009G211200 Sobic009G211200 Sobic001G429600--Sobic009G211200 Sobic004G019200 Sobic004G019200 Sobic001G429600--Sobic004G019200 Sobic001G429600--Sobic006G125900 Sobic006G193300 Sobic006G193300 Sobic001G429600--Sobic006G193300 Sobic001G429600--Sobic001G052400 Sobic001G429600--Sobic010G174700 Sobic006G049600--Sobic009G101200 Sobic006G049600--Sobic010G003400 Sobic008G009600 Sobic008G009600 Sobic006G049600--Sobic008G009600 Sobic003G375200 Sobic003G375200 Sobic006G049600--Sobic003G375200 Sobic010G053600 Sobic010G053600 Sobic006G049600--Sobic010G053600 Sobic007G071900 Sobic007G071900 Sobic006G049600--Sobic007G071900 Sobic006G231800 Sobic006G231800 Sobic006G049600--Sobic006G231800 Sobic006G049600--Sobic006G086600 Sobic008G051200 Sobic008G051200 Sobic006G049600--Sobic008G051200
Octagon: transcription factors


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