Gene annotation
Transcriptome id Sobic.007G220300.2,Sobic.007G220300.1
Synonym ELP2, Sb07g028660
Functional annotation WD domain, G-beta repeat domain containing protein, expressed
UniProt C5YJB7 , A0A1B6PJ45
Pfam PF00400
Panther DB PTHR22847 PTHR22847:SF447
NCBI CDD -
KEGG Orthology K11374; elongator complex protein 2
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G49540 : elongator protein 2
RAP-DB (Rice) LOC_Os08g38570.1 : WD domain, G-beta repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a004980
Brachypodium KQJ98792 , KQJ98791
Barley HORVU1Hr1G020620.15 , HORVU1Hr1G020620.14 , HORVU1Hr1G020620.11 , HORVU1Hr1G020620.10 , HORVU1Hr1G020620.12 , HORVU1Hr1G020620.8 , HORVU1Hr1G020620.3 , HORVU1Hr1G020620.7 , HORVU1Hr1G020620.13
Wheat TraesCS1B02G116100 , TraesCS1D02G096900 , TraesCS1D02G096900 , TraesCS1A02G104700
Populus -


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cDNA sequences
Sobic.007G220300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G086600 IKI3 family protein, expressed K11373: ELP1, IKI3, elongator complex protein 1
2 Sobic.008G131000 domain of unknown function family protein, expressed -
3 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
4 Sobic.001G334700 OsWAK28 - OsWAK receptor-like protein kinase, expressed -
5 Sobic.001G171600 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
6 Sobic.004G332400 neurochondrin family protein, putative, expressed -
7 Sobic.001G081000 nucleotide-binding protein-like, putative, expressed K03593: mrp, ATP-binding protein involved in chromosome partitioning
8 Sobic.003G171500 dnaJ domain containing protein, expressed -
9 Sobic.007G207200 phenylalanyl-tRNA synthetase beta chain, putative, expressed K01890: FARSB, phenylalanyl-tRNA synthetase beta chain
10 Sobic.005G137700 OsFBX409 - F-box domain containing protein, expressed -
11 Sobic.009G101200 expressed protein K17973: NAA25, N-terminal acetyltransferase B complex non-catalytic subunit
12 Sobic.006G040800 expressed protein -
13 Sobic.004G260100 tetratricopeptide repeat, putative, expressed K03255: TIF31, protein TIF31
14 Sobic.002G373950 - -
15 Sobic.009G143800 - K14806: DDX31, ATP-dependent RNA helicase DDX31/DBP7
16 Sobic.010G007100 AAA family ATPase, putative, expressed K14571: RIX7, ribosome biogenesis ATPase
17 Sobic.001G376900 utp14 protein, putative, expressed K14567: U3 small nucleolar RNA-associated protein 14
18 Sobic.008G164600 expressed protein -
19 Sobic.001G280900 expressed protein -
20 Sobic.006G194400 cyclin-T1-4, putative, expressed K15188: cyclin T


Gene co-expression network
sample Sobic007G220300 Sobic007G220300 Sobic006G086600 Sobic006G086600 Sobic007G220300--Sobic006G086600 Sobic008G131000 Sobic008G131000 Sobic007G220300--Sobic008G131000 Sobic002G317200 Sobic002G317200 Sobic007G220300--Sobic002G317200 Sobic001G334700 Sobic001G334700 Sobic007G220300--Sobic001G334700 Sobic001G171600 Sobic001G171600 Sobic007G220300--Sobic001G171600 Sobic004G332400 Sobic004G332400 Sobic007G220300--Sobic004G332400 Sobic001G081000 Sobic001G081000 Sobic007G220300--Sobic001G081000 Sobic003G171500 Sobic003G171500 Sobic007G220300--Sobic003G171500 Sobic007G207200 Sobic007G207200 Sobic007G220300--Sobic007G207200 Sobic010G003400 Sobic010G003400 Sobic006G086600--Sobic010G003400 Sobic001G145400 Sobic001G145400 Sobic006G086600--Sobic001G145400 Sobic001G089600 Sobic001G089600 Sobic006G086600--Sobic001G089600 Sobic009G101200 Sobic009G101200 Sobic006G086600--Sobic009G101200 Sobic001G453400 Sobic001G453400 Sobic006G086600--Sobic001G453400 Sobic004G320500 Sobic004G320500 Sobic006G086600--Sobic004G320500 Sobic002G235200 Sobic002G235200 Sobic006G086600--Sobic002G235200 Sobic006G086600--Sobic007G220300 Sobic010G007100 Sobic010G007100 Sobic006G086600--Sobic010G007100 Sobic010G236400 Sobic010G236400 Sobic008G131000--Sobic010G236400 Sobic008G083000 Sobic008G083000 Sobic008G131000--Sobic008G083000 Sobic003G266001 Sobic003G266001 Sobic008G131000--Sobic003G266001 Sobic002G396000 Sobic002G396000 Sobic008G131000--Sobic002G396000 Sobic010G209400 Sobic010G209400 Sobic008G131000--Sobic010G209400 Sobic003G401100 Sobic003G401100 Sobic008G131000--Sobic003G401100 Sobic006G194400 Sobic006G194400 Sobic008G131000--Sobic006G194400 Sobic004G084300 Sobic004G084300 Sobic008G131000--Sobic004G084300 Sobic003G187500 Sobic003G187500 Sobic008G131000--Sobic003G187500 Sobic004G048800 Sobic004G048800 Sobic002G317200--Sobic004G048800 Sobic001G219600 Sobic001G219600 Sobic002G317200--Sobic001G219600 Sobic004G314000 Sobic004G314000 Sobic002G317200--Sobic004G314000 Sobic001G433800 Sobic001G433800 Sobic002G317200--Sobic001G433800 Sobic003G095900 Sobic003G095900 Sobic002G317200--Sobic003G095900 Sobic004G242400 Sobic004G242400 Sobic002G317200--Sobic004G242400 Sobic002G397500 Sobic002G397500 Sobic002G317200--Sobic002G397500 Sobic005G112300 Sobic005G112300 Sobic002G317200--Sobic005G112300 Sobic009G260500 Sobic009G260500 Sobic002G317200--Sobic009G260500 Sobic004G260100 Sobic004G260100 Sobic001G334700--Sobic004G260100 Sobic001G334700--Sobic002G397500 Sobic003G014500 Sobic003G014500 Sobic001G334700--Sobic003G014500 Sobic001G280900 Sobic001G280900 Sobic001G334700--Sobic001G280900 Sobic002G362800 Sobic002G362800 Sobic001G334700--Sobic002G362800 Sobic003G164200 Sobic003G164200 Sobic001G334700--Sobic003G164200 Sobic008G150700 Sobic008G150700 Sobic001G334700--Sobic008G150700 Sobic001G334700--Sobic007G220300 Sobic006G040800 Sobic006G040800 Sobic001G334700--Sobic006G040800 Sobic001G171600--Sobic006G086600 Sobic001G171600--Sobic007G220300 Sobic001G171600--Sobic003G171500 Sobic001G214600 Sobic001G214600 Sobic001G171600--Sobic001G214600 Sobic005G137700 Sobic005G137700 Sobic001G171600--Sobic005G137700 Sobic009G204400 Sobic009G204400 Sobic001G171600--Sobic009G204400 Sobic001G171600--Sobic001G089600 Sobic001G171600--Sobic001G334700 Sobic002G373950 Sobic002G373950 Sobic001G171600--Sobic002G373950 Sobic004G332400--Sobic006G040800 Sobic008G002500 Sobic008G002500 Sobic004G332400--Sobic008G002500 Sobic004G321700 Sobic004G321700 Sobic004G332400--Sobic004G321700 Sobic009G143800 Sobic009G143800 Sobic004G332400--Sobic009G143800 Sobic003G188400 Sobic003G188400 Sobic004G332400--Sobic003G188400 Sobic002G425500 Sobic002G425500 Sobic004G332400--Sobic002G425500 Sobic001G346900 Sobic001G346900 Sobic004G332400--Sobic001G346900 Sobic008G147200 Sobic008G147200 Sobic004G332400--Sobic008G147200 Sobic004G040200 Sobic004G040200 Sobic004G332400--Sobic004G040200 Sobic004G018300 Sobic004G018300 Sobic001G081000--Sobic004G018300 Sobic003G221600 Sobic003G221600 Sobic001G081000--Sobic003G221600 Sobic001G081000--Sobic008G131000 Sobic003G141500 Sobic003G141500 Sobic001G081000--Sobic003G141500 Sobic008G014500 Sobic008G014500 Sobic001G081000--Sobic008G014500 Sobic003G258900 Sobic003G258900 Sobic001G081000--Sobic003G258900 Sobic001G081000--Sobic008G083000 Sobic001G081000--Sobic007G220300 Sobic009G145101 Sobic009G145101 Sobic001G081000--Sobic009G145101 Sobic006G055200 Sobic006G055200 Sobic003G171500--Sobic006G055200 Sobic003G171500--Sobic006G086600 Sobic003G171500--Sobic007G207200 Sobic003G171500--Sobic002G317200 Sobic005G160100 Sobic005G160100 Sobic003G171500--Sobic005G160100 Sobic003G171500--Sobic007G220300 Sobic003G032700 Sobic003G032700 Sobic003G171500--Sobic003G032700 Sobic001G020000 Sobic001G020000 Sobic003G171500--Sobic001G020000 Sobic004G131300 Sobic004G131300 Sobic003G171500--Sobic004G131300 Sobic001G166600 Sobic001G166600 Sobic007G207200--Sobic001G166600 Sobic007G207200--Sobic001G219600 Sobic007G207200--Sobic002G317200 Sobic010G166400 Sobic010G166400 Sobic007G207200--Sobic010G166400 Sobic001G407700 Sobic001G407700 Sobic007G207200--Sobic001G407700 Sobic009G084900 Sobic009G084900 Sobic007G207200--Sobic009G084900 Sobic009G056200 Sobic009G056200 Sobic007G207200--Sobic009G056200 Sobic009G047200 Sobic009G047200 Sobic007G207200--Sobic009G047200 Sobic010G116600 Sobic010G116600 Sobic007G207200--Sobic010G116600
Octagon: transcription factors


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