Gene annotation
Transcriptome id Sobic.008G164600.1
Synonym Sb08g021070
Functional annotation expressed protein
UniProt C5YRU7
Pfam PF13679
Panther DB PTHR12496 PTHR12496:SF0
NCBI CDD KOG2651; rRNA adenine N-6-methyltransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16650 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os12g41670.1 : expressed protein
MaizeGDB (Corn) Zm00025a025340
Brachypodium KQJ85860
Barley HORVU5Hr1G011720.41 , HORVU5Hr1G011720.40 , HORVU5Hr1G011720.43 , HORVU5Hr1G011720.42 , HORVU5Hr1G011720.44 , HORVU5Hr1G011720.23 , HORVU5Hr1G011720.22 , HORVU5Hr1G011720.21 , HORVU5Hr1G011720.20 , HORVU5Hr1G011720.27 , HORVU5Hr1G011720.26 , HORVU5Hr1G011720.25 , HORVU5Hr1G011720.24 , HORVU5Hr1G011720.29 , HORVU5Hr1G011720.28 , HORVU5Hr1G011720.30 , HORVU5Hr1G011720.31 , HORVU5Hr1G011720.32 , HORVU5Hr1G011720.33 , HORVU5Hr1G011720.34 , HORVU5Hr1G011720.35 , HORVU5Hr1G011720.36 , HORVU5Hr1G011720.37 , HORVU5Hr1G011720.38 , HORVU5Hr1G011720.39 , HORVU5Hr1G011720.1 , HORVU5Hr1G011720.2 , HORVU5Hr1G011720.3 , HORVU5Hr1G011720.4 , HORVU5Hr1G011720.5 , HORVU5Hr1G011720.6 , HORVU5Hr1G011720.7 , HORVU5Hr1G011720.8 , HORVU5Hr1G011720.9 , HORVU5Hr1G011720.18 , HORVU5Hr1G011720.19 , HORVU5Hr1G011720.12 , HORVU5Hr1G011720.13 , HORVU5Hr1G011720.10 , HORVU5Hr1G011720.11 , HORVU5Hr1G011720.16 , HORVU5Hr1G011720.17 , HORVU5Hr1G011720.14 , HORVU5Hr1G011720.15
Wheat TraesCS5A02G049200 , TraesCS5A02G049200 , TraesCS5A02G049200 , TraesCS5B02G054300 , TraesCS5B02G054300 , TraesCS5A02G049200 , TraesCS5B02G054300 , TraesCS5D02G059800 , TraesCS5D02G059800 , TraesCS5D02G059800 , TraesCS5D02G059800 , TraesCS5D02G059800 , TraesCS5B02G054300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G266500 BRE, putative, expressed K12173: BRE, BRCA1-A complex subunit BRE
2 Sobic.006G040800 expressed protein -
3 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
4 Sobic.007G225100 ZOS8-09 - C2H2 zinc finger protein, expressed -
5 Sobic.004G256500 WD domain, G-beta repeat domain containing protein, expressed K12616: enhancer of mRNA-decapping protein 4
6 Sobic.010G118000 PHD-finger family protein, expressed K17586: PHD and RING finger domain-containing protein 1
7 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
8 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
9 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
10 Sobic.003G416700 homeobox domain containing protein, expressed -
11 Sobic.007G071200 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
12 Sobic.002G111600 expressed protein -
13 Sobic.001G219900 expressed protein -
14 Sobic.002G371700 signal recognition particle 68 kDa protein, putative, expressed K03107: signal recognition particle subunit SRP68
15 Sobic.004G332400 neurochondrin family protein, putative, expressed -
16 Sobic.007G187600 pentatricopeptide, putative, expressed -
17 Sobic.004G085000 expressed protein K14310: NUP205, nuclear pore complex protein Nup205
18 Sobic.001G291800 eukaryotic translation initiation factor 3 subunit B, putative, expressed K03253: translation initiation factor 3 subunit B
19 Sobic.001G461400 pre-mRNA-processing factor 39, putative, expressed K13217: PRPF39, pre-mRNA-processing factor 39
20 Sobic.008G099800 expressed protein -


Gene co-expression network
sample Sobic008G164600 Sobic008G164600 Sobic010G266500 Sobic010G266500 Sobic008G164600--Sobic010G266500 Sobic006G040800 Sobic006G040800 Sobic008G164600--Sobic006G040800 Sobic001G145400 Sobic001G145400 Sobic008G164600--Sobic001G145400 Sobic007G225100 Sobic007G225100 Sobic008G164600--Sobic007G225100 Sobic004G256500 Sobic004G256500 Sobic008G164600--Sobic004G256500 Sobic010G118000 Sobic010G118000 Sobic008G164600--Sobic010G118000 Sobic002G145800 Sobic002G145800 Sobic008G164600--Sobic002G145800 Sobic004G246100 Sobic004G246100 Sobic008G164600--Sobic004G246100 Sobic009G255600 Sobic009G255600 Sobic008G164600--Sobic009G255600 Sobic010G266500--Sobic008G164600 Sobic007G187600 Sobic007G187600 Sobic010G266500--Sobic007G187600 Sobic001G023800 Sobic001G023800 Sobic010G266500--Sobic001G023800 Sobic001G461400 Sobic001G461400 Sobic010G266500--Sobic001G461400 Sobic002G371700 Sobic002G371700 Sobic010G266500--Sobic002G371700 Sobic003G416700 Sobic003G416700 Sobic010G266500--Sobic003G416700 Sobic010G266500--Sobic002G145800 Sobic004G155600 Sobic004G155600 Sobic010G266500--Sobic004G155600 Sobic010G266500--Sobic010G118000 Sobic008G002500 Sobic008G002500 Sobic006G040800--Sobic008G002500 Sobic001G063700 Sobic001G063700 Sobic006G040800--Sobic001G063700 Sobic004G332400 Sobic004G332400 Sobic006G040800--Sobic004G332400 Sobic009G088000 Sobic009G088000 Sobic006G040800--Sobic009G088000 Sobic003G360400 Sobic003G360400 Sobic006G040800--Sobic003G360400 Sobic006G040800--Sobic008G164600 Sobic001G354600 Sobic001G354600 Sobic006G040800--Sobic001G354600 Sobic001G433800 Sobic001G433800 Sobic006G040800--Sobic001G433800 Sobic006G040800--Sobic007G225100 Sobic006G086600 Sobic006G086600 Sobic001G145400--Sobic006G086600 Sobic001G035200 Sobic001G035200 Sobic001G145400--Sobic001G035200 Sobic010G059500 Sobic010G059500 Sobic001G145400--Sobic010G059500 Sobic006G077200 Sobic006G077200 Sobic001G145400--Sobic006G077200 Sobic003G405500 Sobic003G405500 Sobic001G145400--Sobic003G405500 Sobic010G007100 Sobic010G007100 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic009G084900 Sobic009G084900 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000 Sobic004G277200 Sobic004G277200 Sobic007G225100--Sobic004G277200 Sobic001G313700 Sobic001G313700 Sobic007G225100--Sobic001G313700 Sobic002G299000 Sobic002G299000 Sobic007G225100--Sobic002G299000 Sobic003G337300 Sobic003G337300 Sobic007G225100--Sobic003G337300 Sobic002G366400 Sobic002G366400 Sobic007G225100--Sobic002G366400 Sobic003G104000 Sobic003G104000 Sobic007G225100--Sobic003G104000 Sobic008G099800 Sobic008G099800 Sobic007G225100--Sobic008G099800 Sobic001G124200 Sobic001G124200 Sobic007G225100--Sobic001G124200 Sobic002G045600 Sobic002G045600 Sobic007G225100--Sobic002G045600 Sobic004G131300 Sobic004G131300 Sobic004G256500--Sobic004G131300 Sobic009G234700 Sobic009G234700 Sobic004G256500--Sobic009G234700 Sobic004G256500--Sobic001G145400 Sobic002G133300 Sobic002G133300 Sobic004G256500--Sobic002G133300 Sobic002G142900 Sobic002G142900 Sobic004G256500--Sobic002G142900 Sobic004G053500 Sobic004G053500 Sobic004G256500--Sobic004G053500 Sobic004G256500--Sobic002G371700 Sobic001G287500 Sobic001G287500 Sobic004G256500--Sobic001G287500 Sobic001G087600 Sobic001G087600 Sobic004G256500--Sobic001G087600 Sobic002G371300 Sobic002G371300 Sobic010G118000--Sobic002G371300 Sobic006G148100 Sobic006G148100 Sobic010G118000--Sobic006G148100 Sobic010G118000--Sobic009G255600 Sobic003G266001 Sobic003G266001 Sobic010G118000--Sobic003G266001 Sobic010G118000--Sobic010G266500 Sobic009G143800 Sobic009G143800 Sobic010G118000--Sobic009G143800 Sobic004G353000 Sobic004G353000 Sobic010G118000--Sobic004G353000 Sobic010G118000--Sobic007G225100 Sobic008G014500 Sobic008G014500 Sobic010G118000--Sobic008G014500 Sobic006G269800 Sobic006G269800 Sobic002G145800--Sobic006G269800 Sobic002G145800--Sobic003G416700 Sobic007G183300 Sobic007G183300 Sobic002G145800--Sobic007G183300 Sobic002G145800--Sobic001G087600 Sobic001G051700 Sobic001G051700 Sobic002G145800--Sobic001G051700 Sobic003G062300 Sobic003G062300 Sobic002G145800--Sobic003G062300 Sobic008G147200 Sobic008G147200 Sobic002G145800--Sobic008G147200 Sobic001G023000 Sobic001G023000 Sobic002G145800--Sobic001G023000 Sobic010G186600 Sobic010G186600 Sobic002G145800--Sobic010G186600 Sobic008G149800 Sobic008G149800 Sobic004G246100--Sobic008G149800 Sobic008G153000 Sobic008G153000 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic002G063900 Sobic002G063900 Sobic004G246100--Sobic002G063900 Sobic008G173100 Sobic008G173100 Sobic004G246100--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic004G246100--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic002G260400 Sobic002G260400 Sobic004G246100--Sobic002G260400 Sobic009G255600--Sobic010G186600 Sobic009G255600--Sobic003G416700 Sobic003G214600 Sobic003G214600 Sobic009G255600--Sobic003G214600 Sobic005G200800 Sobic005G200800 Sobic009G255600--Sobic005G200800 Sobic009G119000 Sobic009G119000 Sobic009G255600--Sobic009G119000 Sobic002G029100 Sobic002G029100 Sobic009G255600--Sobic002G029100 Sobic003G042400 Sobic003G042400 Sobic009G255600--Sobic003G042400 Sobic001G291800 Sobic001G291800 Sobic009G255600--Sobic001G291800 Sobic009G255600--Sobic003G360400
Octagon: transcription factors


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