Gene annotation
Transcriptome id Sobic.003G171500.1
Synonym Sb03g019960
Functional annotation dnaJ domain containing protein, expressed
UniProt C5XLE2
Pfam PF00226 PF11926
Panther DB PTHR10825 PTHR10825:SF38
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G27240 : DNAJ heat shock N-terminal domain-containing protein
RAP-DB (Rice) LOC_Os01g27740.1 : dnaJ domain containing protein, expressed
MaizeGDB (Corn) Zm00025a024571
Brachypodium KQK04363
Barley HORVU3Hr1G051850.8 , HORVU3Hr1G051850.9 , HORVU3Hr1G051850.4 , HORVU3Hr1G051850.5 , HORVU3Hr1G051850.6 , HORVU3Hr1G051850.7 , HORVU3Hr1G051850.1 , HORVU3Hr1G051850.2 , HORVU3Hr1G051850.3 , HORVU3Hr1G051850.16 , HORVU3Hr1G051850.17 , HORVU3Hr1G051850.14 , HORVU3Hr1G051850.15 , HORVU3Hr1G051850.12 , HORVU3Hr1G051850.13 , HORVU3Hr1G051850.10 , HORVU3Hr1G051850.11
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.003G171500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
2 Sobic.006G086600 IKI3 family protein, expressed K11373: ELP1, IKI3, elongator complex protein 1
3 Sobic.007G207200 phenylalanyl-tRNA synthetase beta chain, putative, expressed K01890: FARSB, phenylalanyl-tRNA synthetase beta chain
4 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
5 Sobic.005G160100 RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed K10754: replication factor C subunit 1
6 Sobic.007G220300 WD domain, G-beta repeat domain containing protein, expressed K11374: elongator complex protein 2
7 Sobic.003G032700 - -
8 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
9 Sobic.004G131300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
10 Sobic.010G003400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
11 Sobic.002G275600 RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed K10754: replication factor C subunit 1
12 Sobic.001G089600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
13 Sobic.001G166600 semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00145: N-acetyl-gamma-glutamyl-phosphate reductase
14 Sobic.008G063300 exonuclease, putative, expressed K14570: REX1, REXO1, RNA exonuclease 1
15 Sobic.006G194400 cyclin-T1-4, putative, expressed K15188: cyclin T
16 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
17 Sobic.003G441900 Leucine Rich Repeat family protein, expressed -
18 Sobic.003G095900 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
19 Sobic.001G334700 OsWAK28 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.006G049600 methyltransferase domain containing protein, expressed -


Gene co-expression network
sample Sobic003G171500 Sobic003G171500 Sobic006G055200 Sobic006G055200 Sobic003G171500--Sobic006G055200 Sobic006G086600 Sobic006G086600 Sobic003G171500--Sobic006G086600 Sobic007G207200 Sobic007G207200 Sobic003G171500--Sobic007G207200 Sobic002G317200 Sobic002G317200 Sobic003G171500--Sobic002G317200 Sobic005G160100 Sobic005G160100 Sobic003G171500--Sobic005G160100 Sobic007G220300 Sobic007G220300 Sobic003G171500--Sobic007G220300 Sobic003G032700 Sobic003G032700 Sobic003G171500--Sobic003G032700 Sobic001G020000 Sobic001G020000 Sobic003G171500--Sobic001G020000 Sobic004G131300 Sobic004G131300 Sobic003G171500--Sobic004G131300 Sobic001G194200 Sobic001G194200 Sobic006G055200--Sobic001G194200 Sobic010G010700 Sobic010G010700 Sobic006G055200--Sobic010G010700 Sobic005G001000 Sobic005G001000 Sobic006G055200--Sobic005G001000 Sobic004G276400 Sobic004G276400 Sobic006G055200--Sobic004G276400 Sobic004G291900 Sobic004G291900 Sobic006G055200--Sobic004G291900 Sobic003G186000 Sobic003G186000 Sobic006G055200--Sobic003G186000 Sobic001G289800 Sobic001G289800 Sobic006G055200--Sobic001G289800 Sobic004G263600 Sobic004G263600 Sobic006G055200--Sobic004G263600 Sobic001G002000 Sobic001G002000 Sobic006G055200--Sobic001G002000 Sobic010G003400 Sobic010G003400 Sobic006G086600--Sobic010G003400 Sobic001G145400 Sobic001G145400 Sobic006G086600--Sobic001G145400 Sobic001G089600 Sobic001G089600 Sobic006G086600--Sobic001G089600 Sobic009G101200 Sobic009G101200 Sobic006G086600--Sobic009G101200 Sobic001G453400 Sobic001G453400 Sobic006G086600--Sobic001G453400 Sobic004G320500 Sobic004G320500 Sobic006G086600--Sobic004G320500 Sobic002G235200 Sobic002G235200 Sobic006G086600--Sobic002G235200 Sobic006G086600--Sobic007G220300 Sobic010G007100 Sobic010G007100 Sobic006G086600--Sobic010G007100 Sobic001G166600 Sobic001G166600 Sobic007G207200--Sobic001G166600 Sobic001G219600 Sobic001G219600 Sobic007G207200--Sobic001G219600 Sobic007G207200--Sobic002G317200 Sobic010G166400 Sobic010G166400 Sobic007G207200--Sobic010G166400 Sobic001G407700 Sobic001G407700 Sobic007G207200--Sobic001G407700 Sobic009G084900 Sobic009G084900 Sobic007G207200--Sobic009G084900 Sobic009G056200 Sobic009G056200 Sobic007G207200--Sobic009G056200 Sobic009G047200 Sobic009G047200 Sobic007G207200--Sobic009G047200 Sobic010G116600 Sobic010G116600 Sobic007G207200--Sobic010G116600 Sobic004G048800 Sobic004G048800 Sobic002G317200--Sobic004G048800 Sobic002G317200--Sobic001G219600 Sobic004G314000 Sobic004G314000 Sobic002G317200--Sobic004G314000 Sobic001G433800 Sobic001G433800 Sobic002G317200--Sobic001G433800 Sobic003G095900 Sobic003G095900 Sobic002G317200--Sobic003G095900 Sobic004G242400 Sobic004G242400 Sobic002G317200--Sobic004G242400 Sobic002G397500 Sobic002G397500 Sobic002G317200--Sobic002G397500 Sobic005G112300 Sobic005G112300 Sobic002G317200--Sobic005G112300 Sobic009G260500 Sobic009G260500 Sobic002G317200--Sobic009G260500 Sobic002G275600 Sobic002G275600 Sobic005G160100--Sobic002G275600 Sobic001G214600 Sobic001G214600 Sobic005G160100--Sobic001G214600 Sobic005G160100--Sobic001G089600 Sobic004G260100 Sobic004G260100 Sobic005G160100--Sobic004G260100 Sobic005G160100--Sobic003G171500 Sobic004G096400 Sobic004G096400 Sobic005G160100--Sobic004G096400 Sobic010G059500 Sobic010G059500 Sobic005G160100--Sobic010G059500 Sobic009G251200 Sobic009G251200 Sobic005G160100--Sobic009G251200 Sobic003G260400 Sobic003G260400 Sobic005G160100--Sobic003G260400 Sobic007G220300--Sobic006G086600 Sobic008G131000 Sobic008G131000 Sobic007G220300--Sobic008G131000 Sobic007G220300--Sobic002G317200 Sobic001G334700 Sobic001G334700 Sobic007G220300--Sobic001G334700 Sobic001G171600 Sobic001G171600 Sobic007G220300--Sobic001G171600 Sobic004G332400 Sobic004G332400 Sobic007G220300--Sobic004G332400 Sobic001G081000 Sobic001G081000 Sobic007G220300--Sobic001G081000 Sobic007G220300--Sobic003G171500 Sobic007G220300--Sobic007G207200 Sobic003G032700--Sobic001G089600 Sobic003G032700--Sobic003G171500 Sobic003G166750 Sobic003G166750 Sobic003G032700--Sobic003G166750 Sobic004G089000 Sobic004G089000 Sobic003G032700--Sobic004G089000 Sobic006G216100 Sobic006G216100 Sobic003G032700--Sobic006G216100 Sobic010G115400 Sobic010G115400 Sobic003G032700--Sobic010G115400 Sobic010G102600 Sobic010G102600 Sobic003G032700--Sobic010G102600 Sobic003G032700--Sobic003G095900 Sobic001G111850 Sobic001G111850 Sobic003G032700--Sobic001G111850 Sobic001G020000--Sobic001G219600 Sobic001G020000--Sobic001G433800 Sobic001G020000--Sobic002G317200 Sobic001G354600 Sobic001G354600 Sobic001G020000--Sobic001G354600 Sobic001G087600 Sobic001G087600 Sobic001G020000--Sobic001G087600 Sobic002G425500 Sobic002G425500 Sobic001G020000--Sobic002G425500 Sobic001G020000--Sobic003G095900 Sobic001G352900 Sobic001G352900 Sobic001G020000--Sobic001G352900 Sobic004G124300 Sobic004G124300 Sobic001G020000--Sobic004G124300 Sobic002G133300 Sobic002G133300 Sobic004G131300--Sobic002G133300 Sobic002G142900 Sobic002G142900 Sobic004G131300--Sobic002G142900 Sobic005G172500 Sobic005G172500 Sobic004G131300--Sobic005G172500 Sobic004G131300--Sobic009G084900 Sobic004G256500 Sobic004G256500 Sobic004G131300--Sobic004G256500 Sobic004G131300--Sobic010G059500 Sobic007G054800 Sobic007G054800 Sobic004G131300--Sobic007G054800 Sobic006G136400 Sobic006G136400 Sobic004G131300--Sobic006G136400 Sobic002G256700 Sobic002G256700 Sobic004G131300--Sobic002G256700
Octagon: transcription factors


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