Gene annotation
Transcriptome id Sobic.003G032700.1
Synonym
Functional annotation -
UniProt A0A1B6Q137
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.003G032700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G089600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
2 Sobic.003G171500 dnaJ domain containing protein, expressed -
3 Sobic.003G166750 - K15188: cyclin T
4 Sobic.004G089000 sterol glucosyltransferase, putative, expressed -
5 Sobic.006G216100 expressed protein -
6 Sobic.010G115400 pentatricopeptide, putative, expressed -
7 Sobic.010G102600 pentatricopeptide, putative, expressed -
8 Sobic.003G095900 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
9 Sobic.001G111850 - -
10 Sobic.008G014801 - -
11 Sobic.002G275600 RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed K10754: replication factor C subunit 1
12 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
13 Sobic.009G132700 - -
14 Sobic.001G251400 expressed protein -
15 Sobic.010G051700 DNA topoisomerase I family protein, expressed -
16 Sobic.004G248600 expressed protein K15166: mediator of RNA polymerase II transcription subunit 23
17 Sobic.006G049900 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
18 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
19 Sobic.006G086600 IKI3 family protein, expressed K11373: ELP1, IKI3, elongator complex protein 1
20 Sobic.010G080700 DNA-directed RNA polymerase subunit, putative, expressed K03021: RPC2, DNA-directed RNA polymerase III subunit RPC2


Gene co-expression network
sample Sobic003G032700 Sobic003G032700 Sobic001G089600 Sobic001G089600 Sobic003G032700--Sobic001G089600 Sobic003G171500 Sobic003G171500 Sobic003G032700--Sobic003G171500 Sobic003G166750 Sobic003G166750 Sobic003G032700--Sobic003G166750 Sobic004G089000 Sobic004G089000 Sobic003G032700--Sobic004G089000 Sobic006G216100 Sobic006G216100 Sobic003G032700--Sobic006G216100 Sobic010G115400 Sobic010G115400 Sobic003G032700--Sobic010G115400 Sobic010G102600 Sobic010G102600 Sobic003G032700--Sobic010G102600 Sobic003G095900 Sobic003G095900 Sobic003G032700--Sobic003G095900 Sobic001G111850 Sobic001G111850 Sobic003G032700--Sobic001G111850 Sobic001G089600--Sobic003G095900 Sobic006G086600 Sobic006G086600 Sobic001G089600--Sobic006G086600 Sobic001G089600--Sobic010G115400 Sobic001G493700 Sobic001G493700 Sobic001G089600--Sobic001G493700 Sobic002G397500 Sobic002G397500 Sobic001G089600--Sobic002G397500 Sobic004G260100 Sobic004G260100 Sobic001G089600--Sobic004G260100 Sobic004G248600 Sobic004G248600 Sobic001G089600--Sobic004G248600 Sobic004G322400 Sobic004G322400 Sobic001G089600--Sobic004G322400 Sobic009G084900 Sobic009G084900 Sobic001G089600--Sobic009G084900 Sobic006G055200 Sobic006G055200 Sobic003G171500--Sobic006G055200 Sobic003G171500--Sobic006G086600 Sobic007G207200 Sobic007G207200 Sobic003G171500--Sobic007G207200 Sobic002G317200 Sobic002G317200 Sobic003G171500--Sobic002G317200 Sobic005G160100 Sobic005G160100 Sobic003G171500--Sobic005G160100 Sobic007G220300 Sobic007G220300 Sobic003G171500--Sobic007G220300 Sobic003G171500--Sobic003G032700 Sobic001G020000 Sobic001G020000 Sobic003G171500--Sobic001G020000 Sobic004G131300 Sobic004G131300 Sobic003G171500--Sobic004G131300 Sobic009G165700 Sobic009G165700 Sobic003G166750--Sobic009G165700 Sobic008G001200 Sobic008G001200 Sobic003G166750--Sobic008G001200 Sobic009G256400 Sobic009G256400 Sobic003G166750--Sobic009G256400 Sobic001G370900 Sobic001G370900 Sobic003G166750--Sobic001G370900 Sobic001G289800 Sobic001G289800 Sobic003G166750--Sobic001G289800 Sobic002G316600 Sobic002G316600 Sobic003G166750--Sobic002G316600 Sobic001G194200 Sobic001G194200 Sobic003G166750--Sobic001G194200 Sobic001G527800 Sobic001G527800 Sobic003G166750--Sobic001G527800 Sobic001G457800 Sobic001G457800 Sobic003G166750--Sobic001G457800 Sobic008G063300 Sobic008G063300 Sobic004G089000--Sobic008G063300 Sobic004G089000--Sobic006G216100 Sobic004G089000--Sobic003G032700 Sobic001G455600 Sobic001G455600 Sobic004G089000--Sobic001G455600 Sobic010G059500 Sobic010G059500 Sobic004G089000--Sobic010G059500 Sobic004G089000--Sobic001G111850 Sobic006G093300 Sobic006G093300 Sobic004G089000--Sobic006G093300 Sobic004G089000--Sobic003G171500 Sobic007G017800 Sobic007G017800 Sobic004G089000--Sobic007G017800 Sobic004G034800 Sobic004G034800 Sobic006G216100--Sobic004G034800 Sobic002G042800 Sobic002G042800 Sobic006G216100--Sobic002G042800 Sobic003G168100 Sobic003G168100 Sobic006G216100--Sobic003G168100 Sobic006G216100--Sobic001G455600 Sobic006G252900 Sobic006G252900 Sobic006G216100--Sobic006G252900 Sobic009G132700 Sobic009G132700 Sobic006G216100--Sobic009G132700 Sobic007G031900 Sobic007G031900 Sobic006G216100--Sobic007G031900 Sobic003G398700 Sobic003G398700 Sobic006G216100--Sobic003G398700 Sobic004G244900 Sobic004G244900 Sobic006G216100--Sobic004G244900 Sobic010G115400--Sobic001G089600 Sobic002G399800 Sobic002G399800 Sobic010G115400--Sobic002G399800 Sobic010G115400--Sobic010G102600 Sobic010G174700 Sobic010G174700 Sobic010G115400--Sobic010G174700 Sobic001G393900 Sobic001G393900 Sobic010G115400--Sobic001G393900 Sobic010G115400--Sobic003G095900 Sobic004G019200 Sobic004G019200 Sobic010G115400--Sobic004G019200 Sobic003G260400 Sobic003G260400 Sobic010G115400--Sobic003G260400 Sobic010G115400--Sobic003G032700 Sobic008G014801 Sobic008G014801 Sobic010G102600--Sobic008G014801 Sobic010G102600--Sobic001G089600 Sobic004G320500 Sobic004G320500 Sobic010G102600--Sobic004G320500 Sobic001G453400 Sobic001G453400 Sobic010G102600--Sobic001G453400 Sobic010G102600--Sobic001G493700 Sobic005G122700 Sobic005G122700 Sobic010G102600--Sobic005G122700 Sobic010G102600--Sobic010G115400 Sobic010G003400 Sobic010G003400 Sobic010G102600--Sobic010G003400 Sobic010G102600--Sobic003G166750 Sobic004G242400 Sobic004G242400 Sobic003G095900--Sobic004G242400 Sobic001G433800 Sobic001G433800 Sobic003G095900--Sobic001G433800 Sobic002G133300 Sobic002G133300 Sobic003G095900--Sobic002G133300 Sobic003G095900--Sobic001G089600 Sobic006G088200 Sobic006G088200 Sobic003G095900--Sobic006G088200 Sobic003G360400 Sobic003G360400 Sobic003G095900--Sobic003G360400 Sobic003G095900--Sobic009G256400 Sobic004G276400 Sobic004G276400 Sobic003G095900--Sobic004G276400 Sobic003G095900--Sobic001G289800 Sobic001G111850--Sobic003G166750 Sobic001G111850--Sobic009G165700 Sobic001G439300 Sobic001G439300 Sobic001G111850--Sobic001G439300 Sobic001G111850--Sobic008G001200 Sobic001G111850--Sobic009G256400 Sobic001G111850--Sobic001G433800 Sobic001G111850--Sobic001G370900 Sobic010G123600 Sobic010G123600 Sobic001G111850--Sobic010G123600 Sobic002G042600 Sobic002G042600 Sobic001G111850--Sobic002G042600
Octagon: transcription factors


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