Gene annotation
Transcriptome id Sobic.001G251400.4,Sobic.001G251400.2,Sobic.001G251400.1,Sobic.001G251400.5,Sobic.001G251400.6,Sobic.001G251400.3
Synonym
Functional annotation expressed protein
UniProt A0A1Z5S7B7 , A0A1B6QKY3 , A0A1Z5S7A8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10417 : -
RAP-DB (Rice) LOC_Os10g27180.1 : expressed protein
MaizeGDB (Corn) Zm00025a017803
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
2 Sobic.003G032700 - -
3 Sobic.002G318700 - -
4 Sobic.007G220300 WD domain, G-beta repeat domain containing protein, expressed K11374: elongator complex protein 2
5 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
6 Sobic.001G363500 DIRP family protein, putative, expressed -
7 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
8 Sobic.002G275600 RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed K10754: replication factor C subunit 1
9 Sobic.004G208900 RNA-binding protein Luc7-like, putative, expressed -
10 Sobic.006G040500 phospholipid-transporting ATPase 2, putative, expressed K01530: phospholipid-translocating ATPase
11 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
12 Sobic.004G040350 - -
13 Sobic.007G161300 VHS and GAT domain containing protein, expressed -
14 Sobic.003G372700 expressed protein -
15 Sobic.003G052200 G-patch domain containing protein, expressed -
16 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
17 Sobic.009G251200 expressed protein -
18 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
19 Sobic.003G171500 dnaJ domain containing protein, expressed -
20 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase


Gene co-expression network
sample Sobic001G251400 Sobic001G251400 Sobic002G317200 Sobic002G317200 Sobic001G251400--Sobic002G317200 Sobic003G032700 Sobic003G032700 Sobic001G251400--Sobic003G032700 Sobic002G318700 Sobic002G318700 Sobic001G251400--Sobic002G318700 Sobic007G220300 Sobic007G220300 Sobic001G251400--Sobic007G220300 Sobic009G247400 Sobic009G247400 Sobic001G251400--Sobic009G247400 Sobic001G363500 Sobic001G363500 Sobic001G251400--Sobic001G363500 Sobic002G103600 Sobic002G103600 Sobic001G251400--Sobic002G103600 Sobic002G275600 Sobic002G275600 Sobic001G251400--Sobic002G275600 Sobic004G208900 Sobic004G208900 Sobic001G251400--Sobic004G208900 Sobic004G048800 Sobic004G048800 Sobic002G317200--Sobic004G048800 Sobic001G219600 Sobic001G219600 Sobic002G317200--Sobic001G219600 Sobic004G314000 Sobic004G314000 Sobic002G317200--Sobic004G314000 Sobic001G433800 Sobic001G433800 Sobic002G317200--Sobic001G433800 Sobic003G095900 Sobic003G095900 Sobic002G317200--Sobic003G095900 Sobic004G242400 Sobic004G242400 Sobic002G317200--Sobic004G242400 Sobic002G397500 Sobic002G397500 Sobic002G317200--Sobic002G397500 Sobic005G112300 Sobic005G112300 Sobic002G317200--Sobic005G112300 Sobic009G260500 Sobic009G260500 Sobic002G317200--Sobic009G260500 Sobic001G089600 Sobic001G089600 Sobic003G032700--Sobic001G089600 Sobic003G171500 Sobic003G171500 Sobic003G032700--Sobic003G171500 Sobic003G166750 Sobic003G166750 Sobic003G032700--Sobic003G166750 Sobic004G089000 Sobic004G089000 Sobic003G032700--Sobic004G089000 Sobic006G216100 Sobic006G216100 Sobic003G032700--Sobic006G216100 Sobic010G115400 Sobic010G115400 Sobic003G032700--Sobic010G115400 Sobic010G102600 Sobic010G102600 Sobic003G032700--Sobic010G102600 Sobic003G032700--Sobic003G095900 Sobic001G111850 Sobic001G111850 Sobic003G032700--Sobic001G111850 Sobic003G372700 Sobic003G372700 Sobic002G318700--Sobic003G372700 Sobic004G007100 Sobic004G007100 Sobic002G318700--Sobic004G007100 Sobic008G084700 Sobic008G084700 Sobic002G318700--Sobic008G084700 Sobic002G243900 Sobic002G243900 Sobic002G318700--Sobic002G243900 Sobic006G032500 Sobic006G032500 Sobic002G318700--Sobic006G032500 Sobic001G214300 Sobic001G214300 Sobic002G318700--Sobic001G214300 Sobic002G180666 Sobic002G180666 Sobic002G318700--Sobic002G180666 Sobic002G145101 Sobic002G145101 Sobic002G318700--Sobic002G145101 Sobic006G048500 Sobic006G048500 Sobic002G318700--Sobic006G048500 Sobic006G086600 Sobic006G086600 Sobic007G220300--Sobic006G086600 Sobic008G131000 Sobic008G131000 Sobic007G220300--Sobic008G131000 Sobic007G220300--Sobic002G317200 Sobic001G334700 Sobic001G334700 Sobic007G220300--Sobic001G334700 Sobic001G171600 Sobic001G171600 Sobic007G220300--Sobic001G171600 Sobic004G332400 Sobic004G332400 Sobic007G220300--Sobic004G332400 Sobic001G081000 Sobic001G081000 Sobic007G220300--Sobic001G081000 Sobic007G220300--Sobic003G171500 Sobic007G207200 Sobic007G207200 Sobic007G220300--Sobic007G207200 Sobic001G311500 Sobic001G311500 Sobic009G247400--Sobic001G311500 Sobic010G279450 Sobic010G279450 Sobic009G247400--Sobic010G279450 Sobic009G247400--Sobic009G260500 Sobic004G009600 Sobic004G009600 Sobic009G247400--Sobic004G009600 Sobic001G214600 Sobic001G214600 Sobic009G247400--Sobic001G214600 Sobic009G247400--Sobic001G363500 Sobic009G247400--Sobic001G219600 Sobic009G247400--Sobic002G317200 Sobic009G247400--Sobic004G314000 Sobic001G363500--Sobic005G112300 Sobic007G062800 Sobic007G062800 Sobic001G363500--Sobic007G062800 Sobic010G247800 Sobic010G247800 Sobic001G363500--Sobic010G247800 Sobic002G299700 Sobic002G299700 Sobic001G363500--Sobic002G299700 Sobic010G112100 Sobic010G112100 Sobic001G363500--Sobic010G112100 Sobic001G363500--Sobic004G242400 Sobic001G363500--Sobic001G433800 Sobic001G363500--Sobic010G279450 Sobic010G139000 Sobic010G139000 Sobic001G363500--Sobic010G139000 Sobic003G444800 Sobic003G444800 Sobic002G103600--Sobic003G444800 Sobic005G013200 Sobic005G013200 Sobic002G103600--Sobic005G013200 SobicK028600 SobicK028600 Sobic002G103600--SobicK028600 Sobic003G059750 Sobic003G059750 Sobic002G103600--Sobic003G059750 Sobic002G103600--Sobic001G311500 Sobic002G103600--Sobic009G247400 Sobic002G408200 Sobic002G408200 Sobic002G103600--Sobic002G408200 Sobic008G028700 Sobic008G028700 Sobic002G103600--Sobic008G028700 Sobic007G042400 Sobic007G042400 Sobic002G103600--Sobic007G042400 Sobic005G160100 Sobic005G160100 Sobic002G275600--Sobic005G160100 Sobic002G275600--Sobic009G247400 Sobic008G014500 Sobic008G014500 Sobic002G275600--Sobic008G014500 Sobic002G275600--Sobic001G363500 Sobic002G275600--Sobic001G219600 Sobic001G441400 Sobic001G441400 Sobic002G275600--Sobic001G441400 Sobic002G275600--Sobic002G397500 Sobic003G006400 Sobic003G006400 Sobic002G275600--Sobic003G006400 Sobic010G209400 Sobic010G209400 Sobic002G275600--Sobic010G209400 Sobic009G040600 Sobic009G040600 Sobic004G208900--Sobic009G040600 Sobic010G277500 Sobic010G277500 Sobic004G208900--Sobic010G277500 Sobic003G052200 Sobic003G052200 Sobic004G208900--Sobic003G052200 Sobic004G208900--Sobic010G139000 Sobic008G113100 Sobic008G113100 Sobic004G208900--Sobic008G113100 Sobic002G006900 Sobic002G006900 Sobic004G208900--Sobic002G006900 Sobic004G208900--Sobic008G028700 Sobic003G280800 Sobic003G280800 Sobic004G208900--Sobic003G280800 Sobic009G126400 Sobic009G126400 Sobic004G208900--Sobic009G126400
Octagon: transcription factors


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