Gene annotation
Transcriptome id Sobic.006G040500.2,Sobic.006G040500.4,Sobic.006G040500.3,Sobic.006G040500.10,Sobic.006G040500.6,Sobic.006G040500.9,Sobic.006G040500.5,Sobic.006G040500.7,Sobic.006G040500.1,Sobic.006G040500.8
Synonym ALA2
Functional annotation phospholipid-transporting ATPase 2, putative, expressed
UniProt A0A1B6PJZ6 , A0A1Z5RCK9 , A0A1Z5RCZ1 , A0A1Z5RC57 , A0A1Z5RC83 , A0A1Z5RC21 , A0A1Z5RD56 , A0A1B6PJZ4
Pfam PF00122 PF12710 PF16209 PF16212 PF12710 PF16212
Panther DB PTHR24092 PTHR24092:SF72
NCBI CDD -
KEGG Orthology K01530; phospholipid-translocating ATPase
Gene Ontology GO:0016021; integral component of membrane GO:0015914phospholipid transport GO:0005524ATP binding GO:0000287magnesium ion binding GO:0000166nucleotide binding GO:0016021integral component of membrane GO:0015914phospholipid transport GO:0005524ATP binding GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT5G44240 : aminophospholipid ATPase 2
RAP-DB (Rice) LOC_Os11g25980.1,LOC_Os04g28460.1 : phospholipid-transporting ATPase 2, putative, expressed
MaizeGDB (Corn) Zm00025a055798
Brachypodium KQJ82123 , PNT60834 , PNT60833 , PNT60832
Barley HORVU2Hr1G067870.29 , HORVU2Hr1G067870.28 , HORVU2Hr1G067870.21 , HORVU2Hr1G067870.20 , HORVU2Hr1G067870.23 , HORVU2Hr1G067870.22 , HORVU2Hr1G067870.25 , HORVU2Hr1G067870.24 , HORVU2Hr1G067870.27 , HORVU2Hr1G067870.26 , HORVU2Hr1G067870.8 , HORVU2Hr1G067870.9 , HORVU2Hr1G067870.6 , HORVU2Hr1G067870.7 , HORVU2Hr1G067870.4 , HORVU2Hr1G067870.5 , HORVU2Hr1G067870.2 , HORVU2Hr1G067870.3 , HORVU2Hr1G067870.1 , HORVU2Hr1G067870.38 , HORVU2Hr1G067870.36 , HORVU2Hr1G067870.37 , HORVU2Hr1G067870.34 , HORVU2Hr1G067870.35 , HORVU2Hr1G067870.32 , HORVU2Hr1G067870.33 , HORVU2Hr1G067870.30 , HORVU2Hr1G067870.31 , HORVU2Hr1G067870.40 , HORVU2Hr1G067870.14 , HORVU2Hr1G067870.15 , HORVU2Hr1G067870.17 , HORVU2Hr1G067870.10 , HORVU2Hr1G067870.11 , HORVU2Hr1G067870.12 , HORVU2Hr1G067870.13 , HORVU2Hr1G067870.19
Wheat TraesCS2A02G276800 , TraesCS2B02G294800 , TraesCS2D02G276300
Populus -


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cDNA sequences
Sobic.006G040500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
2 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
3 Sobic.007G062800 SET domain containing protein, expressed -
4 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
5 Sobic.010G010700 PHD-finger family protein, expressed -
6 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
7 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
8 Sobic.010G123600 WW domain containing protein, expressed -
9 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
10 Sobic.004G334300 ATMAK10, putative, expressed -
11 Sobic.006G041600 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
12 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
13 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
14 Sobic.008G088872 - -
15 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
16 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
17 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
18 Sobic.003G225700 - -
19 Sobic.002G397500 SAC3/GANP family protein, expressed -
20 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26


Gene co-expression network
sample Sobic006G040500 Sobic006G040500 Sobic003G186000 Sobic003G186000 Sobic006G040500--Sobic003G186000 Sobic005G001000 Sobic005G001000 Sobic006G040500--Sobic005G001000 Sobic007G062800 Sobic007G062800 Sobic006G040500--Sobic007G062800 Sobic005G112300 Sobic005G112300 Sobic006G040500--Sobic005G112300 Sobic010G010700 Sobic010G010700 Sobic006G040500--Sobic010G010700 Sobic002G008900 Sobic002G008900 Sobic006G040500--Sobic002G008900 Sobic009G256400 Sobic009G256400 Sobic006G040500--Sobic009G256400 Sobic010G123600 Sobic010G123600 Sobic006G040500--Sobic010G123600 Sobic004G276400 Sobic004G276400 Sobic006G040500--Sobic004G276400 Sobic003G186000--Sobic004G276400 Sobic010G105200 Sobic010G105200 Sobic003G186000--Sobic010G105200 Sobic003G186000--Sobic010G010700 Sobic003G186000--Sobic005G001000 Sobic003G205200 Sobic003G205200 Sobic003G186000--Sobic003G205200 Sobic001G194200 Sobic001G194200 Sobic003G186000--Sobic001G194200 Sobic003G186000--Sobic007G062800 Sobic008G001200 Sobic008G001200 Sobic003G186000--Sobic008G001200 Sobic007G103100 Sobic007G103100 Sobic003G186000--Sobic007G103100 Sobic005G001000--Sobic001G194200 Sobic005G001000--Sobic002G008900 Sobic001G370900 Sobic001G370900 Sobic005G001000--Sobic001G370900 Sobic005G001000--Sobic003G205200 Sobic004G291900 Sobic004G291900 Sobic005G001000--Sobic004G291900 Sobic005G001000--Sobic003G186000 Sobic005G001000--Sobic008G001200 Sobic003G422500 Sobic003G422500 Sobic005G001000--Sobic003G422500 Sobic005G001000--Sobic009G256400 Sobic001G540400 Sobic001G540400 Sobic007G062800--Sobic001G540400 Sobic007G062800--Sobic005G112300 Sobic002G405800 Sobic002G405800 Sobic007G062800--Sobic002G405800 Sobic007G062800--Sobic002G008900 Sobic007G062800--Sobic010G010700 Sobic004G242400 Sobic004G242400 Sobic007G062800--Sobic004G242400 Sobic004G034900 Sobic004G034900 Sobic007G062800--Sobic004G034900 Sobic007G062800--Sobic004G276400 Sobic002G397500 Sobic002G397500 Sobic007G062800--Sobic002G397500 Sobic001G363500 Sobic001G363500 Sobic005G112300--Sobic001G363500 Sobic005G112300--Sobic007G062800 Sobic010G112100 Sobic010G112100 Sobic005G112300--Sobic010G112100 Sobic010G139000 Sobic010G139000 Sobic005G112300--Sobic010G139000 Sobic007G105100 Sobic007G105100 Sobic005G112300--Sobic007G105100 Sobic005G112300--Sobic001G540400 Sobic005G112300--Sobic010G010700 Sobic005G008800 Sobic005G008800 Sobic005G112300--Sobic005G008800 Sobic002G071500 Sobic002G071500 Sobic005G112300--Sobic002G071500 Sobic010G206900 Sobic010G206900 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic010G010700--Sobic004G276400 Sobic010G010700--Sobic001G194200 Sobic010G010700--Sobic007G062800 Sobic010G010700--Sobic002G008900 Sobic010G010700--Sobic005G112300 Sobic010G010700--Sobic008G001200 Sobic010G010700--Sobic003G186000 Sobic009G191000 Sobic009G191000 Sobic002G008900--Sobic009G191000 Sobic002G411600 Sobic002G411600 Sobic002G008900--Sobic002G411600 Sobic002G008900--Sobic007G062800 Sobic002G008900--Sobic003G422500 Sobic002G008900--Sobic005G001000 Sobic002G008900--Sobic010G010700 Sobic002G008900--Sobic004G034900 Sobic002G008900--Sobic010G206900 Sobic009G053900 Sobic009G053900 Sobic002G008900--Sobic009G053900 Sobic001G457800 Sobic001G457800 Sobic009G256400--Sobic001G457800 Sobic009G256400--Sobic008G001200 Sobic009G256400--Sobic001G370900 Sobic009G256400--Sobic004G291900 Sobic009G256400--Sobic005G001000 Sobic003G166750 Sobic003G166750 Sobic009G256400--Sobic003G166750 Sobic009G256400--Sobic001G194200 Sobic009G256400--Sobic004G276400 Sobic009G256400--Sobic010G010700 Sobic010G123600--Sobic010G010700 Sobic009G256300 Sobic009G256300 Sobic010G123600--Sobic009G256300 Sobic003G170900 Sobic003G170900 Sobic010G123600--Sobic003G170900 Sobic005G167700 Sobic005G167700 Sobic010G123600--Sobic005G167700 Sobic010G123600--Sobic005G112300 Sobic001G433800 Sobic001G433800 Sobic010G123600--Sobic001G433800 Sobic010G123600--Sobic010G112100 Sobic010G123600--Sobic001G194200 Sobic010G123600--Sobic008G001200 Sobic004G276400--Sobic003G186000 Sobic004G276400--Sobic010G010700 Sobic004G276400--Sobic010G105200 Sobic004G276400--Sobic001G194200 Sobic004G276400--Sobic004G034900 Sobic004G276400--Sobic007G062800 Sobic004G276400--Sobic004G291900 Sobic004G276400--Sobic004G242400 Sobic004G276400--Sobic008G001200
Octagon: transcription factors


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