Gene annotation
Transcriptome id Sobic.006G049900.4,Sobic.006G049900.1,Sobic.006G049900.2
Synonym Sb06g013250
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1B6PK99
Pfam PF00249 PF00226
Panther DB PTHR24078 PTHR24078:SF310
NCBI CDD KOG0724; Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains
KEGG Orthology K09522; DnaJ homolog subfamily C member 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11450 : DnaJ domain ;Myb-like DNA-binding domain
RAP-DB (Rice) LOC_Os04g30890.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a011839 , Zm00025a011835
Brachypodium KQJ82202
Barley HORVU1Hr1G091820.2 , HORVU1Hr1G091820.1
Wheat TraesCS1D02G428400
Populus PNT46400


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cDNA sequences
Sobic.006G049900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G399800 PWWP domain containing protein, expressed -
2 Sobic.010G079500 PHD-finger domain containing protein, putative, expressed -
3 Sobic.002G316600 expressed protein -
4 Sobic.003G260400 ATP dependent DNA ligase family protein, putative, expressed K10747: DNA ligase 1
5 Sobic.006G119400 SWIM zinc finger family protein, putative, expressed -
6 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
7 Sobic.005G122700 PPR repeat domain containing protein, putative, expressed -
8 Sobic.003G441900 Leucine Rich Repeat family protein, expressed -
9 Sobic.001G004400 - K14290: XPO1, exportin-1
10 Sobic.010G053600 pre-mRNA-processing-splicing factor 8, putative, expressed K12856: PRPF8, pre-mRNA-processing factor 8
11 Sobic.007G103100 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
12 Sobic.003G095900 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
13 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
14 Sobic.007G165600 aminopeptidase, putative, expressed K01256: aminopeptidase N
15 Sobic.005G142800 exportin 1, putative, expressed K15436: TRPO3, transportin-3
16 Sobic.004G332400 neurochondrin family protein, putative, expressed -
17 Sobic.004G185800 expressed protein -
18 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
19 Sobic.003G101700 dnaJ domain containing protein, expressed -
20 Sobic.002G391600 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K12854: SNRNP200, pre-mRNA-splicing helicase BRR2


Gene co-expression network
sample Sobic006G049900 Sobic006G049900 Sobic002G399800 Sobic002G399800 Sobic006G049900--Sobic002G399800 Sobic010G079500 Sobic010G079500 Sobic006G049900--Sobic010G079500 Sobic002G316600 Sobic002G316600 Sobic006G049900--Sobic002G316600 Sobic003G260400 Sobic003G260400 Sobic006G049900--Sobic003G260400 Sobic006G119400 Sobic006G119400 Sobic006G049900--Sobic006G119400 Sobic004G276400 Sobic004G276400 Sobic006G049900--Sobic004G276400 Sobic005G122700 Sobic005G122700 Sobic006G049900--Sobic005G122700 Sobic003G441900 Sobic003G441900 Sobic006G049900--Sobic003G441900 Sobic001G004400 Sobic001G004400 Sobic006G049900--Sobic001G004400 Sobic003G095900 Sobic003G095900 Sobic002G399800--Sobic003G095900 Sobic002G399800--Sobic003G260400 Sobic002G399800--Sobic010G079500 Sobic004G248600 Sobic004G248600 Sobic002G399800--Sobic004G248600 Sobic002G179400 Sobic002G179400 Sobic002G399800--Sobic002G179400 Sobic002G133300 Sobic002G133300 Sobic002G399800--Sobic002G133300 Sobic001G089600 Sobic001G089600 Sobic002G399800--Sobic001G089600 Sobic001G393900 Sobic001G393900 Sobic002G399800--Sobic001G393900 Sobic009G109200 Sobic009G109200 Sobic002G399800--Sobic009G109200 Sobic001G529600 Sobic001G529600 Sobic010G079500--Sobic001G529600 Sobic010G079500--Sobic002G316600 Sobic010G079500--Sobic009G109200 Sobic001G230000 Sobic001G230000 Sobic010G079500--Sobic001G230000 Sobic010G079500--Sobic006G119400 Sobic001G527800 Sobic001G527800 Sobic010G079500--Sobic001G527800 Sobic003G196300 Sobic003G196300 Sobic010G079500--Sobic003G196300 Sobic008G132900 Sobic008G132900 Sobic010G079500--Sobic008G132900 Sobic010G079500--Sobic003G260400 Sobic007G103100 Sobic007G103100 Sobic002G316600--Sobic007G103100 Sobic002G316600--Sobic001G527800 Sobic003G186000 Sobic003G186000 Sobic002G316600--Sobic003G186000 Sobic002G316600--Sobic004G276400 Sobic002G316600--Sobic001G529600 Sobic003G166750 Sobic003G166750 Sobic002G316600--Sobic003G166750 Sobic001G194200 Sobic001G194200 Sobic002G316600--Sobic001G194200 Sobic001G289800 Sobic001G289800 Sobic002G316600--Sobic001G289800 Sobic002G316600--Sobic010G079500 Sobic003G260400--Sobic010G079500 Sobic003G260400--Sobic003G095900 Sobic003G260400--Sobic002G399800 Sobic003G101700 Sobic003G101700 Sobic003G260400--Sobic003G101700 Sobic003G260400--Sobic002G316600 Sobic010G003400 Sobic010G003400 Sobic003G260400--Sobic010G003400 Sobic003G260400--Sobic001G089600 Sobic001G453400 Sobic001G453400 Sobic003G260400--Sobic001G453400 Sobic003G260400--Sobic001G393900 Sobic006G119400--Sobic010G079500 Sobic005G142800 Sobic005G142800 Sobic006G119400--Sobic005G142800 Sobic004G107200 Sobic004G107200 Sobic006G119400--Sobic004G107200 Sobic010G053600 Sobic010G053600 Sobic006G119400--Sobic010G053600 Sobic002G043100 Sobic002G043100 Sobic006G119400--Sobic002G043100 Sobic006G119400--Sobic006G049900 Sobic006G119400--Sobic008G132900 Sobic008G016300 Sobic008G016300 Sobic006G119400--Sobic008G016300 Sobic001G298900 Sobic001G298900 Sobic006G119400--Sobic001G298900 Sobic004G276400--Sobic003G186000 Sobic010G010700 Sobic010G010700 Sobic004G276400--Sobic010G010700 Sobic010G105200 Sobic010G105200 Sobic004G276400--Sobic010G105200 Sobic004G276400--Sobic001G194200 Sobic004G034900 Sobic004G034900 Sobic004G276400--Sobic004G034900 Sobic007G062800 Sobic007G062800 Sobic004G276400--Sobic007G062800 Sobic004G291900 Sobic004G291900 Sobic004G276400--Sobic004G291900 Sobic004G242400 Sobic004G242400 Sobic004G276400--Sobic004G242400 Sobic008G001200 Sobic008G001200 Sobic004G276400--Sobic008G001200 Sobic005G122700--Sobic002G316600 Sobic005G122700--Sobic007G103100 Sobic005G122700--Sobic003G166750 Sobic005G122700--Sobic001G529600 Sobic005G122700--Sobic002G133300 Sobic005G122700--Sobic001G527800 Sobic005G122700--Sobic001G289800 Sobic005G122700--Sobic010G079500 Sobic001G542500 Sobic001G542500 Sobic005G122700--Sobic001G542500 Sobic005G167700 Sobic005G167700 Sobic003G441900--Sobic005G167700 Sobic001G433800 Sobic001G433800 Sobic003G441900--Sobic001G433800 Sobic003G441900--Sobic002G133300 Sobic010G123600 Sobic010G123600 Sobic003G441900--Sobic010G123600 Sobic001G151100 Sobic001G151100 Sobic003G441900--Sobic001G151100 Sobic003G441900--Sobic004G276400 Sobic001G020000 Sobic001G020000 Sobic003G441900--Sobic001G020000 Sobic004G334300 Sobic004G334300 Sobic003G441900--Sobic004G334300 Sobic003G441900--Sobic001G194200 Sobic001G004400--Sobic002G133300 Sobic001G110600 Sobic001G110600 Sobic001G004400--Sobic001G110600 Sobic007G054800 Sobic007G054800 Sobic001G004400--Sobic007G054800 Sobic001G004400--Sobic004G248600 Sobic003G312100 Sobic003G312100 Sobic001G004400--Sobic003G312100 Sobic001G493700 Sobic001G493700 Sobic001G004400--Sobic001G493700 Sobic003G221400 Sobic003G221400 Sobic001G004400--Sobic003G221400 Sobic001G004400--Sobic004G276400 Sobic001G004400--Sobic002G179400
Octagon: transcription factors


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