Gene annotation
Transcriptome id Sobic.008G014801.1
Synonym -
Functional annotation -
UniProt A0A1Z5R4A5
Pfam PF13041 PF01535
Panther DB PTHR24015 PTHR24015:SF109
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G22410 : SLOW GROWTH 1
RAP-DB (Rice) LOC_Os02g02424.1 : ZOS2-02 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a038043 , Zm00025a038044
Brachypodium PNT65728
Barley HORVU6Hr1G008870.5 , HORVU6Hr1G008870.7 , HORVU6Hr1G008870.6 , HORVU6Hr1G008870.1 , HORVU6Hr1G008870.2 , HORVU6Hr1G008870.8
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G102600 pentatricopeptide, putative, expressed -
2 Sobic.001G052400 RNA recognition motif containing protein, putative, expressed K14573: NOP4, nucleolar protein 4
3 Sobic.001G376900 utp14 protein, putative, expressed K14567: U3 small nucleolar RNA-associated protein 14
4 Sobic.003G441900 Leucine Rich Repeat family protein, expressed -
5 Sobic.004G320500 expressed protein K14794: ribosomal RNA-processing protein 12
6 Sobic.003G032700 - -
7 Sobic.001G455600 cysteine synthase, putative, expressed K01738: cysteine synthase
8 Sobic.003G171500 dnaJ domain containing protein, expressed -
9 Sobic.008G063300 exonuclease, putative, expressed K14570: REX1, REXO1, RNA exonuclease 1
10 Sobic.001G089600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
11 Sobic.006G086600 IKI3 family protein, expressed K11373: ELP1, IKI3, elongator complex protein 1
12 Sobic.007G220300 WD domain, G-beta repeat domain containing protein, expressed K11374: elongator complex protein 2
13 Sobic.003G188400 glutamate dehydrogenase protein, putative, expressed K00262: E1.4.1.4, glutamate dehydrogenase (NADP+)
14 Sobic.005G137700 OsFBX409 - F-box domain containing protein, expressed -
15 Sobic.001G393900 FAD binding domain containing protein, expressed -
16 Sobic.003G156500 WD domain, G-beta repeat domain containing protein, expressed K14824: ERB1, ribosome biogenesis protein ERB1
17 Sobic.008G054000 tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed -
18 Sobic.009G185700 mutS domain V family protein, expressed K08741: DNA mismatch repair protein MSH5
19 Sobic.004G332400 neurochondrin family protein, putative, expressed -
20 Sobic.003G260400 ATP dependent DNA ligase family protein, putative, expressed K10747: DNA ligase 1


Gene co-expression network
sample Sobic008G014801 Sobic008G014801 Sobic010G102600 Sobic010G102600 Sobic008G014801--Sobic010G102600 Sobic001G052400 Sobic001G052400 Sobic008G014801--Sobic001G052400 Sobic001G376900 Sobic001G376900 Sobic008G014801--Sobic001G376900 Sobic003G441900 Sobic003G441900 Sobic008G014801--Sobic003G441900 Sobic004G320500 Sobic004G320500 Sobic008G014801--Sobic004G320500 Sobic003G032700 Sobic003G032700 Sobic008G014801--Sobic003G032700 Sobic001G455600 Sobic001G455600 Sobic008G014801--Sobic001G455600 Sobic003G171500 Sobic003G171500 Sobic008G014801--Sobic003G171500 Sobic008G063300 Sobic008G063300 Sobic008G014801--Sobic008G063300 Sobic010G102600--Sobic008G014801 Sobic001G089600 Sobic001G089600 Sobic010G102600--Sobic001G089600 Sobic010G102600--Sobic004G320500 Sobic001G453400 Sobic001G453400 Sobic010G102600--Sobic001G453400 Sobic001G493700 Sobic001G493700 Sobic010G102600--Sobic001G493700 Sobic005G122700 Sobic005G122700 Sobic010G102600--Sobic005G122700 Sobic010G115400 Sobic010G115400 Sobic010G102600--Sobic010G115400 Sobic010G003400 Sobic010G003400 Sobic010G102600--Sobic010G003400 Sobic003G166750 Sobic003G166750 Sobic010G102600--Sobic003G166750 Sobic001G052400--Sobic004G320500 Sobic001G052400--Sobic010G003400 Sobic001G052400--Sobic001G453400 Sobic007G217100 Sobic007G217100 Sobic001G052400--Sobic007G217100 Sobic003G042400 Sobic003G042400 Sobic001G052400--Sobic003G042400 Sobic004G340400 Sobic004G340400 Sobic001G052400--Sobic004G340400 Sobic006G086600 Sobic006G086600 Sobic001G052400--Sobic006G086600 Sobic010G174700 Sobic010G174700 Sobic001G052400--Sobic010G174700 Sobic006G125900 Sobic006G125900 Sobic001G052400--Sobic006G125900 Sobic001G376900--Sobic003G042400 Sobic001G376900--Sobic001G453400 Sobic007G126500 Sobic007G126500 Sobic001G376900--Sobic007G126500 Sobic001G376900--Sobic006G086600 Sobic009G158100 Sobic009G158100 Sobic001G376900--Sobic009G158100 Sobic007G168300 Sobic007G168300 Sobic001G376900--Sobic007G168300 Sobic004G224600 Sobic004G224600 Sobic001G376900--Sobic004G224600 Sobic001G376900--Sobic001G052400 Sobic001G393900 Sobic001G393900 Sobic001G376900--Sobic001G393900 Sobic005G167700 Sobic005G167700 Sobic003G441900--Sobic005G167700 Sobic001G433800 Sobic001G433800 Sobic003G441900--Sobic001G433800 Sobic002G133300 Sobic002G133300 Sobic003G441900--Sobic002G133300 Sobic010G123600 Sobic010G123600 Sobic003G441900--Sobic010G123600 Sobic001G151100 Sobic001G151100 Sobic003G441900--Sobic001G151100 Sobic004G276400 Sobic004G276400 Sobic003G441900--Sobic004G276400 Sobic001G020000 Sobic001G020000 Sobic003G441900--Sobic001G020000 Sobic004G334300 Sobic004G334300 Sobic003G441900--Sobic004G334300 Sobic001G194200 Sobic001G194200 Sobic003G441900--Sobic001G194200 Sobic004G320500--Sobic001G052400 Sobic004G320500--Sobic006G086600 Sobic004G320500--Sobic004G340400 Sobic002G256700 Sobic002G256700 Sobic004G320500--Sobic002G256700 Sobic004G320500--Sobic001G493700 Sobic004G320500--Sobic001G089600 Sobic004G320500--Sobic010G102600 Sobic004G320500--Sobic010G003400 Sobic009G255600 Sobic009G255600 Sobic004G320500--Sobic009G255600 Sobic003G032700--Sobic001G089600 Sobic003G032700--Sobic003G171500 Sobic003G032700--Sobic003G166750 Sobic004G089000 Sobic004G089000 Sobic003G032700--Sobic004G089000 Sobic006G216100 Sobic006G216100 Sobic003G032700--Sobic006G216100 Sobic003G032700--Sobic010G115400 Sobic003G032700--Sobic010G102600 Sobic003G095900 Sobic003G095900 Sobic003G032700--Sobic003G095900 Sobic001G111850 Sobic001G111850 Sobic003G032700--Sobic001G111850 Sobic004G140600 Sobic004G140600 Sobic001G455600--Sobic004G140600 Sobic009G132700 Sobic009G132700 Sobic001G455600--Sobic009G132700 Sobic009G185700 Sobic009G185700 Sobic001G455600--Sobic009G185700 Sobic004G134200 Sobic004G134200 Sobic001G455600--Sobic004G134200 Sobic010G139000 Sobic010G139000 Sobic001G455600--Sobic010G139000 Sobic001G455600--Sobic006G216100 Sobic001G456900 Sobic001G456900 Sobic001G455600--Sobic001G456900 Sobic001G455600--Sobic003G441900 Sobic008G044100 Sobic008G044100 Sobic001G455600--Sobic008G044100 Sobic006G055200 Sobic006G055200 Sobic003G171500--Sobic006G055200 Sobic003G171500--Sobic006G086600 Sobic007G207200 Sobic007G207200 Sobic003G171500--Sobic007G207200 Sobic002G317200 Sobic002G317200 Sobic003G171500--Sobic002G317200 Sobic005G160100 Sobic005G160100 Sobic003G171500--Sobic005G160100 Sobic007G220300 Sobic007G220300 Sobic003G171500--Sobic007G220300 Sobic003G171500--Sobic003G032700 Sobic003G171500--Sobic001G020000 Sobic004G131300 Sobic004G131300 Sobic003G171500--Sobic004G131300 Sobic008G063300--Sobic004G140600 Sobic008G063300--Sobic001G433800 Sobic006G096900 Sobic006G096900 Sobic008G063300--Sobic006G096900 Sobic003G360400 Sobic003G360400 Sobic008G063300--Sobic003G360400 Sobic008G063300--Sobic003G095900 Sobic008G063300--Sobic010G123600 Sobic003G188400 Sobic003G188400 Sobic008G063300--Sobic003G188400 Sobic009G177500 Sobic009G177500 Sobic008G063300--Sobic009G177500 Sobic010G059500 Sobic010G059500 Sobic008G063300--Sobic010G059500
Octagon: transcription factors


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