Gene annotation
Transcriptome id Sobic.006G194400.1
Synonym Sb06g026720
Functional annotation cyclin-T1-4, putative, expressed
UniProt C5YEN1
Pfam PF00134
Panther DB PTHR10026:SF74 PTHR10026
NCBI CDD KOG0834; CDK9 kinase-activating protein cyclin T
KEGG Orthology K15188; cyclin T
Gene Ontology GO:0000079; regulation of cyclin-dependent protein serine/threonine kinase activity GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT5G45190 : Cyclin family protein
RAP-DB (Rice) LOC_Os12g30020.1 : cyclin-T1-4, putative, expressed
MaizeGDB (Corn) Zm00025a056705 , Zm00025a000252
Brachypodium KQK19297
Barley HORVU4Hr1G021250.2 , HORVU4Hr1G021250.3 , HORVU4Hr1G021250.1 , HORVU4Hr1G021250.6 , HORVU4Hr1G021250.7 , HORVU4Hr1G021250.4 , HORVU4Hr1G021250.5 , HORVU4Hr1G021250.8 , HORVU4Hr1G021250.9 , HORVU5Hr1G038970.18 , HORVU5Hr1G038970.19 , HORVU5Hr1G038970.12 , HORVU5Hr1G038970.13 , HORVU5Hr1G038970.10 , HORVU5Hr1G038970.11 , HORVU5Hr1G038970.16 , HORVU5Hr1G038970.17 , HORVU5Hr1G038970.14 , HORVU5Hr1G038970.15 , HORVU5Hr1G038970.1 , HORVU5Hr1G038970.2 , HORVU5Hr1G038970.3 , HORVU5Hr1G038970.4 , HORVU5Hr1G038970.6 , HORVU5Hr1G038970.7 , HORVU5Hr1G038970.8 , HORVU5Hr1G038970.9 , HORVU2Hr1G083340.8 , HORVU2Hr1G083340.9 , HORVU2Hr1G083340.6 , HORVU2Hr1G083340.7 , HORVU2Hr1G083340.4 , HORVU2Hr1G083340.5 , HORVU2Hr1G083340.2 , HORVU2Hr1G083340.3 , HORVU2Hr1G083340.1 , HORVU0Hr1G007890.2 , HORVU0Hr1G007890.3 , HORVU4Hr1G021250.10 , HORVU4Hr1G021250.11 , HORVU4Hr1G021250.13 , HORVU4Hr1G021250.14 , HORVU4Hr1G021250.15 , HORVU4Hr1G021250.16 , HORVU4Hr1G021250.17 , HORVU4Hr1G021250.18 , HORVU4Hr1G021250.19 , HORVU4Hr1G021250.25 , HORVU4Hr1G021250.24 , HORVU4Hr1G021250.21 , HORVU4Hr1G021250.20 , HORVU4Hr1G021250.23 , HORVU4Hr1G021250.22 , HORVU4Hr1G021220.9 , HORVU4Hr1G021220.8 , HORVU4Hr1G021220.7 , HORVU4Hr1G021220.6 , HORVU4Hr1G021220.5 , HORVU4Hr1G021220.4 , HORVU4Hr1G021220.3 , HORVU4Hr1G021220.2 , HORVU4Hr1G021220.1 , HORVU4Hr1G021220.16 , HORVU4Hr1G021220.15 , HORVU4Hr1G021220.14 , HORVU4Hr1G021220.13 , HORVU4Hr1G021220.12 , HORVU4Hr1G021220.11 , HORVU4Hr1G021220.10
Wheat TraesCS4B02G115800 , TraesCS5B02G112100 , TraesCS5B02G112100 , TraesCS2A02G323500 , TraesCS4A02G199300 , TraesCS5A02G103900 , TraesCS4A02G199600 , TraesCS2B02G358600 , TraesCS4B02G116000 , TraesCS2D02G339400 , TraesCS5D02G121900 , TraesCS4D02G113600 , TraesCS4D02G113400 , TraesCS2D02G339400
Populus -


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cDNA sequences
Sobic.006G194400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G131000 domain of unknown function family protein, expressed -
2 Sobic.005G106500 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K11165: dehydrogenase/reductase SDR family member 7
3 Sobic.001G227200 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K00861: RFK, riboflavin kinase
4 Sobic.007G203200 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
5 Sobic.001G360900 peptidyl-prolyl isomerase PASTICCINO1, putative, expressed -
6 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
7 Sobic.003G141500 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
8 Sobic.002G396000 XPA-binding protein 2, putative, expressed K12867: SYF1, pre-mRNA-splicing factor SYF1
9 Sobic.010G209400 WD domain, G-beta repeat domain containing protein, expressed K03130: transcription initiation factor TFIID subunit 5
10 Sobic.002G425500 ATPOT1, putative, expressed -
11 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
12 Sobic.002G164800 SET domain containing protein, expressed K11423: [histone H3]-dimethyl-L-lysine36 N-methyltransferase
13 Sobic.009G024400 ZOS5-03 - C2H2 zinc finger protein, expressed K09191: general transcription factor IIIA
14 Sobic.010G277500 expressed protein -
15 Sobic.007G054400 FAR1 family protein, expressed -
16 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
17 Sobic.008G047300 Trihelix Family(PubMedID : 24864043)@homeodomain, putative, expressed -
18 Sobic.001G124000 pinin/SDK/memA protein, putative, expressed K13114: pinin
19 Sobic.003G171500 dnaJ domain containing protein, expressed -
20 Sobic.008G002500 RCD1, putative, expressed -


Gene co-expression network
sample Sobic006G194400 Sobic006G194400 Sobic008G131000 Sobic008G131000 Sobic006G194400--Sobic008G131000 Sobic005G106500 Sobic005G106500 Sobic006G194400--Sobic005G106500 Sobic001G227200 Sobic001G227200 Sobic006G194400--Sobic001G227200 Sobic007G203200 Sobic007G203200 Sobic006G194400--Sobic007G203200 Sobic001G360900 Sobic001G360900 Sobic006G194400--Sobic001G360900 Sobic010G236400 Sobic010G236400 Sobic006G194400--Sobic010G236400 Sobic003G141500 Sobic003G141500 Sobic006G194400--Sobic003G141500 Sobic002G396000 Sobic002G396000 Sobic006G194400--Sobic002G396000 Sobic010G209400 Sobic010G209400 Sobic006G194400--Sobic010G209400 Sobic008G131000--Sobic010G236400 Sobic008G083000 Sobic008G083000 Sobic008G131000--Sobic008G083000 Sobic003G266001 Sobic003G266001 Sobic008G131000--Sobic003G266001 Sobic008G131000--Sobic002G396000 Sobic008G131000--Sobic010G209400 Sobic003G401100 Sobic003G401100 Sobic008G131000--Sobic003G401100 Sobic008G131000--Sobic006G194400 Sobic004G084300 Sobic004G084300 Sobic008G131000--Sobic004G084300 Sobic003G187500 Sobic003G187500 Sobic008G131000--Sobic003G187500 Sobic005G106500--Sobic001G227200 Sobic004G140600 Sobic004G140600 Sobic005G106500--Sobic004G140600 Sobic001G219600 Sobic001G219600 Sobic005G106500--Sobic001G219600 Sobic010G279700 Sobic010G279700 Sobic005G106500--Sobic010G279700 Sobic005G106500--Sobic007G203200 Sobic001G493200 Sobic001G493200 Sobic005G106500--Sobic001G493200 Sobic009G024400 Sobic009G024400 Sobic005G106500--Sobic009G024400 Sobic005G106500--Sobic003G266001 Sobic005G106500--Sobic006G194400 Sobic001G227200--Sobic004G140600 Sobic009G177500 Sobic009G177500 Sobic001G227200--Sobic009G177500 Sobic001G227200--Sobic005G106500 Sobic010G139000 Sobic010G139000 Sobic001G227200--Sobic010G139000 Sobic002G343901 Sobic002G343901 Sobic001G227200--Sobic002G343901 Sobic004G258700 Sobic004G258700 Sobic001G227200--Sobic004G258700 Sobic001G311500 Sobic001G311500 Sobic001G227200--Sobic001G311500 Sobic001G036050 Sobic001G036050 Sobic001G227200--Sobic001G036050 Sobic001G456900 Sobic001G456900 Sobic001G227200--Sobic001G456900 Sobic010G145800 Sobic010G145800 Sobic007G203200--Sobic010G145800 Sobic009G050900 Sobic009G050900 Sobic007G203200--Sobic009G050900 Sobic001G407200 Sobic001G407200 Sobic007G203200--Sobic001G407200 Sobic001G281600 Sobic001G281600 Sobic007G203200--Sobic001G281600 Sobic010G140400 Sobic010G140400 Sobic007G203200--Sobic010G140400 Sobic007G203200--Sobic010G279700 Sobic007G203200--Sobic005G106500 Sobic007G203200--Sobic003G401100 Sobic006G118700 Sobic006G118700 Sobic007G203200--Sobic006G118700 Sobic009G065100 Sobic009G065100 Sobic001G360900--Sobic009G065100 Sobic005G084100 Sobic005G084100 Sobic001G360900--Sobic005G084100 Sobic003G163100 Sobic003G163100 Sobic001G360900--Sobic003G163100 Sobic007G054400 Sobic007G054400 Sobic001G360900--Sobic007G054400 Sobic001G253200 Sobic001G253200 Sobic001G360900--Sobic001G253200 Sobic008G011100 Sobic008G011100 Sobic001G360900--Sobic008G011100 Sobic006G210100 Sobic006G210100 Sobic001G360900--Sobic006G210100 Sobic004G018300 Sobic004G018300 Sobic001G360900--Sobic004G018300 Sobic001G360900--Sobic004G084300 Sobic010G236400--Sobic004G084300 Sobic002G264200 Sobic002G264200 Sobic010G236400--Sobic002G264200 Sobic010G069100 Sobic010G069100 Sobic010G236400--Sobic010G069100 Sobic002G126500 Sobic002G126500 Sobic010G236400--Sobic002G126500 Sobic004G274200 Sobic004G274200 Sobic010G236400--Sobic004G274200 Sobic010G116600 Sobic010G116600 Sobic010G236400--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic010G236400--Sobic007G183900 Sobic002G071500 Sobic002G071500 Sobic010G236400--Sobic002G071500 Sobic010G236400--Sobic003G401100 Sobic003G141500--Sobic001G219600 Sobic008G047800 Sobic008G047800 Sobic003G141500--Sobic008G047800 Sobic003G141500--Sobic009G050900 Sobic003G141500--Sobic001G493200 Sobic002G143500 Sobic002G143500 Sobic003G141500--Sobic002G143500 Sobic003G443100 Sobic003G443100 Sobic003G141500--Sobic003G443100 Sobic009G126400 Sobic009G126400 Sobic003G141500--Sobic009G126400 Sobic001G071400 Sobic001G071400 Sobic003G141500--Sobic001G071400 Sobic006G200600 Sobic006G200600 Sobic003G141500--Sobic006G200600 Sobic002G158700 Sobic002G158700 Sobic002G396000--Sobic002G158700 Sobic006G128900 Sobic006G128900 Sobic002G396000--Sobic006G128900 Sobic007G096000 Sobic007G096000 Sobic002G396000--Sobic007G096000 Sobic003G280800 Sobic003G280800 Sobic002G396000--Sobic003G280800 Sobic001G511500 Sobic001G511500 Sobic002G396000--Sobic001G511500 Sobic009G210500 Sobic009G210500 Sobic002G396000--Sobic009G210500 Sobic002G396000--Sobic004G018300 Sobic002G396000--Sobic008G131000 Sobic001G090400 Sobic001G090400 Sobic002G396000--Sobic001G090400 Sobic010G209400--Sobic010G236400 Sobic010G209400--Sobic004G084300 Sobic010G209400--Sobic009G210500 Sobic010G209400--Sobic001G511500 Sobic001G542700 Sobic001G542700 Sobic010G209400--Sobic001G542700 Sobic009G040600 Sobic009G040600 Sobic010G209400--Sobic009G040600 Sobic003G038500 Sobic003G038500 Sobic010G209400--Sobic003G038500 Sobic010G209400--Sobic008G131000 Sobic010G209400--Sobic008G047800
Octagon: transcription factors


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