Gene annotation
Transcriptome id Sobic.009G211200.1
Synonym
Functional annotation tRNAHis guanylyltransferase family protein, expressed
UniProt A0A1B6P9I8
Pfam PF14413 PF04446
Panther DB PTHR12729 PTHR12729:SF6
NCBI CDD KOG2721; Uncharacterized conserved protein
KEGG Orthology K10761; tRNA(His) guanylyltransferase
Gene Ontology GO:0008193; tRNA guanylyltransferase activity GO:0006400tRNA modification GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT2G32320 : tRNAHis guanylyltransferase
RAP-DB (Rice) LOC_Os05g45890.1 : tRNAHis guanylyltransferase family protein, expressed
MaizeGDB (Corn) Zm00025a044354
Brachypodium KQK05204 , KQJ93677
Barley HORVU5Hr1G016450.13 , HORVU5Hr1G016450.12 , HORVU5Hr1G016450.11 , HORVU5Hr1G016450.10 , HORVU5Hr1G016450.17 , HORVU5Hr1G016450.16 , HORVU5Hr1G016450.15 , HORVU5Hr1G016450.14 , HORVU5Hr1G016450.19 , HORVU5Hr1G016450.18 , HORVU3Hr1G032740.7 , HORVU3Hr1G032740.5 , HORVU3Hr1G032740.4 , HORVU3Hr1G032740.3 , HORVU3Hr1G032740.2 , HORVU3Hr1G032740.1 , HORVU3Hr1G032740.9 , HORVU3Hr1G032740.8 , HORVU3Hr1G032740.19 , HORVU3Hr1G032740.18 , HORVU3Hr1G032740.17 , HORVU3Hr1G032740.16 , HORVU3Hr1G032740.15 , HORVU3Hr1G032740.14 , HORVU3Hr1G032740.13 , HORVU3Hr1G032740.12 , HORVU3Hr1G032740.11 , HORVU3Hr1G032740.10 , HORVU5Hr1G016450.35 , HORVU5Hr1G016450.34 , HORVU5Hr1G016450.37 , HORVU5Hr1G016450.36 , HORVU5Hr1G016450.31 , HORVU5Hr1G016450.30 , HORVU5Hr1G016450.33 , HORVU5Hr1G016450.32 , HORVU5Hr1G016450.39 , HORVU5Hr1G016450.38 , HORVU5Hr1G016450.28 , HORVU5Hr1G016450.29 , HORVU5Hr1G016450.22 , HORVU5Hr1G016450.23 , HORVU5Hr1G016450.20 , HORVU5Hr1G016450.21 , HORVU5Hr1G016450.26 , HORVU5Hr1G016450.27 , HORVU5Hr1G016450.24 , HORVU5Hr1G016450.25 , HORVU5Hr1G016450.9 , HORVU3Hr1G032740.26 , HORVU3Hr1G032740.27 , HORVU3Hr1G032740.24 , HORVU3Hr1G032740.25 , HORVU3Hr1G032740.22 , HORVU3Hr1G032740.23 , HORVU3Hr1G032740.20 , HORVU3Hr1G032740.21 , HORVU5Hr1G016450.48 , HORVU5Hr1G016450.49 , HORVU5Hr1G016450.44 , HORVU5Hr1G016450.46 , HORVU5Hr1G016450.47 , HORVU5Hr1G016450.40 , HORVU5Hr1G016450.41 , HORVU5Hr1G016450.43 , HORVU5Hr1G016450.3 , HORVU5Hr1G016450.2 , HORVU5Hr1G016450.1 , HORVU5Hr1G016450.7 , HORVU5Hr1G016450.6 , HORVU5Hr1G016450.5 , HORVU5Hr1G016450.4 , HORVU5Hr1G016450.8 , HORVU5Hr1G016450.45
Wheat TraesCS5B02G071000 , TraesCS5B02G071000 , TraesCS3D02G169700 , TraesCS4B02G077000 , TraesCS4B02G077000 , TraesCS5D02G072600 , TraesCS3A02G163200 , TraesCS5D02G072600 , TraesCS5A02G061100 , TraesCS3B02G194300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G429600 HEAT repeat family protein, putative, expressed -
2 Sobic.006G125900 elongator complex protein 3, putative, expressed K07739: ELP3, elongator complex protein 3
3 Sobic.004G224600 expressed protein -
4 Sobic.001G401500 programmed cell death protein 2, putative, expressed K14801: pre-rRNA-processing protein TSR4
5 Sobic.002G105101 - -
6 Sobic.009G101200 expressed protein K17973: NAA25, N-terminal acetyltransferase B complex non-catalytic subunit
7 Sobic.006G002800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K15332: tRNA (uracil-5-)-methyltransferase
8 Sobic.005G108000 - -
9 Sobic.001G393900 FAD binding domain containing protein, expressed -
10 Sobic.004G340400 translation initiation factor eIF-2B subunit epsilon, putative, expressed K03240: translation initiation factor eIF-2B subunit epsilon
11 Sobic.001G408600 RNA pseudouridine synthase, putative, expressed -
12 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
13 Sobic.002G171300 - -
14 Sobic.006G193300 nucleolar complex protein, putative, expressed K14771: NOC4, U3 small nucleolar RNA-associated protein 19
15 Sobic.009G246500 N-acetyltransferase 10, putative, expressed K14521: NAT10, N-acetyltransferase 10
16 Sobic.002G372500 exportin 1, putative, expressed K14288: exportin-T
17 Sobic.004G030800 expressed protein -
18 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
19 Sobic.008G147200 tubulin, putative, expressed -
20 Sobic.006G086600 IKI3 family protein, expressed K11373: ELP1, IKI3, elongator complex protein 1


Gene co-expression network
sample Sobic009G211200 Sobic009G211200 Sobic001G429600 Sobic001G429600 Sobic009G211200--Sobic001G429600 Sobic006G125900 Sobic006G125900 Sobic009G211200--Sobic006G125900 Sobic004G224600 Sobic004G224600 Sobic009G211200--Sobic004G224600 Sobic001G401500 Sobic001G401500 Sobic009G211200--Sobic001G401500 Sobic002G105101 Sobic002G105101 Sobic009G211200--Sobic002G105101 Sobic009G101200 Sobic009G101200 Sobic009G211200--Sobic009G101200 Sobic006G002800 Sobic006G002800 Sobic009G211200--Sobic006G002800 Sobic005G108000 Sobic005G108000 Sobic009G211200--Sobic005G108000 Sobic001G393900 Sobic001G393900 Sobic009G211200--Sobic001G393900 Sobic003G199300 Sobic003G199300 Sobic001G429600--Sobic003G199300 Sobic002G372500 Sobic002G372500 Sobic001G429600--Sobic002G372500 Sobic001G429600--Sobic009G101200 Sobic001G429600--Sobic009G211200 Sobic004G019200 Sobic004G019200 Sobic001G429600--Sobic004G019200 Sobic001G429600--Sobic006G125900 Sobic006G193300 Sobic006G193300 Sobic001G429600--Sobic006G193300 Sobic001G052400 Sobic001G052400 Sobic001G429600--Sobic001G052400 Sobic010G174700 Sobic010G174700 Sobic001G429600--Sobic010G174700 Sobic001G453400 Sobic001G453400 Sobic006G125900--Sobic001G453400 Sobic001G145400 Sobic001G145400 Sobic006G125900--Sobic001G145400 Sobic006G125900--Sobic001G052400 Sobic008G051200 Sobic008G051200 Sobic006G125900--Sobic008G051200 Sobic006G125900--Sobic010G174700 Sobic006G125900--Sobic001G429600 Sobic004G340400 Sobic004G340400 Sobic006G125900--Sobic004G340400 Sobic007G217100 Sobic007G217100 Sobic006G125900--Sobic007G217100 Sobic010G003400 Sobic010G003400 Sobic006G125900--Sobic010G003400 Sobic004G224600--Sobic006G002800 Sobic003G146600 Sobic003G146600 Sobic004G224600--Sobic003G146600 Sobic001G376900 Sobic001G376900 Sobic004G224600--Sobic001G376900 Sobic006G125500 Sobic006G125500 Sobic004G224600--Sobic006G125500 Sobic002G235200 Sobic002G235200 Sobic004G224600--Sobic002G235200 Sobic009G246500 Sobic009G246500 Sobic004G224600--Sobic009G246500 Sobic003G042400 Sobic003G042400 Sobic004G224600--Sobic003G042400 Sobic004G224600--Sobic001G145400 Sobic006G086600 Sobic006G086600 Sobic004G224600--Sobic006G086600 Sobic001G401500--Sobic004G340400 Sobic001G259000 Sobic001G259000 Sobic001G401500--Sobic001G259000 Sobic010G007100 Sobic010G007100 Sobic001G401500--Sobic010G007100 Sobic001G401500--Sobic009G211200 Sobic001G244300 Sobic001G244300 Sobic001G401500--Sobic001G244300 Sobic001G401500--Sobic006G193300 Sobic001G401500--Sobic009G101200 Sobic010G055700 Sobic010G055700 Sobic001G401500--Sobic010G055700 Sobic001G401500--Sobic006G086600 Sobic002G105101--Sobic007G217100 Sobic002G105101--Sobic001G052400 Sobic008G147200 Sobic008G147200 Sobic002G105101--Sobic008G147200 Sobic002G105101--Sobic009G211200 Sobic010G224700 Sobic010G224700 Sobic002G105101--Sobic010G224700 Sobic010G215900 Sobic010G215900 Sobic002G105101--Sobic010G215900 Sobic004G321700 Sobic004G321700 Sobic002G105101--Sobic004G321700 Sobic009G145101 Sobic009G145101 Sobic002G105101--Sobic009G145101 Sobic003G409200 Sobic003G409200 Sobic002G105101--Sobic003G409200 Sobic009G101200--Sobic006G086600 Sobic009G101200--Sobic010G003400 Sobic009G101200--Sobic001G145400 Sobic009G101200--Sobic001G259000 Sobic004G085000 Sobic004G085000 Sobic009G101200--Sobic004G085000 Sobic009G101200--Sobic001G052400 Sobic009G101200--Sobic009G246500 Sobic009G101200--Sobic001G429600 Sobic006G049600 Sobic006G049600 Sobic009G101200--Sobic006G049600 Sobic003G308500 Sobic003G308500 Sobic006G002800--Sobic003G308500 Sobic006G002800--Sobic004G224600 Sobic002G150700 Sobic002G150700 Sobic006G002800--Sobic002G150700 Sobic006G002800--Sobic001G145400 Sobic006G002800--Sobic003G146600 Sobic006G002800--Sobic010G007100 Sobic006G002800--Sobic004G321700 Sobic009G234700 Sobic009G234700 Sobic006G002800--Sobic009G234700 Sobic006G002800--Sobic008G147200 Sobic001G346900 Sobic001G346900 Sobic005G108000--Sobic001G346900 Sobic002G127200 Sobic002G127200 Sobic005G108000--Sobic002G127200 Sobic005G108000--Sobic004G224600 Sobic006G178100 Sobic006G178100 Sobic005G108000--Sobic006G178100 Sobic002G171300 Sobic002G171300 Sobic005G108000--Sobic002G171300 Sobic005G108000--Sobic009G211200 Sobic010G080550 Sobic010G080550 Sobic005G108000--Sobic010G080550 Sobic005G108000--Sobic006G002800 Sobic006G245900 Sobic006G245900 Sobic005G108000--Sobic006G245900 Sobic001G393900--Sobic004G321700 Sobic006G267600 Sobic006G267600 Sobic001G393900--Sobic006G267600 Sobic001G089600 Sobic001G089600 Sobic001G393900--Sobic001G089600 Sobic002G399800 Sobic002G399800 Sobic001G393900--Sobic002G399800 Sobic004G096400 Sobic004G096400 Sobic001G393900--Sobic004G096400 Sobic007G173500 Sobic007G173500 Sobic001G393900--Sobic007G173500 Sobic006G269800 Sobic006G269800 Sobic001G393900--Sobic006G269800 Sobic003G309050 Sobic003G309050 Sobic001G393900--Sobic003G309050 Sobic001G393900--Sobic003G042400
Octagon: transcription factors


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