Gene annotation
Transcriptome id Sobic.002G105101.3,Sobic.002G105101.2,Sobic.002G105101.1
Synonym -
Functional annotation -
UniProt A0A1W0W3A6 , A0A1W0W3C3 , A0A1W0W393
Pfam PF08387
Panther DB PTHR32212 PTHR32212:SF74
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g17680.1,LOC_Os12g31340.1,LOC_Os07g17520.1 : expressed protein,OsFBD15 - F-box and FBD domain containing protein, expressed,ribosomal RNA apurinic site specific lyase, putative
MaizeGDB (Corn) -
Brachypodium KQK16228
Barley -
Wheat TraesCS7D02G505000 , TraesCS5A02G069200 , TraesCS1B02G396400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G217100 sas10/Utp3 family protein, expressed K14767: UTP3, U3 small nucleolar RNA-associated protein 3
2 Sobic.001G052400 RNA recognition motif containing protein, putative, expressed K14573: NOP4, nucleolar protein 4
3 Sobic.008G147200 tubulin, putative, expressed -
4 Sobic.009G211200 tRNAHis guanylyltransferase family protein, expressed K10761: tRNA(His) guanylyltransferase
5 Sobic.010G224700 - K17680: twinkle protein
6 Sobic.010G215900 type II intron maturase protein, putative, expressed -
7 Sobic.004G321700 mitochondrial transcription termination factor family protein, putative, expressed K15032: mTERF domain-containing protein, mitochondrial
8 Sobic.009G145101 - -
9 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
10 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
11 Sobic.004G332400 neurochondrin family protein, putative, expressed -
12 Sobic.005G137700 OsFBX409 - F-box domain containing protein, expressed -
13 Sobic.006G226300 SDA1, putative, expressed K14856: SDA1, protein SDA1
14 Sobic.004G320500 expressed protein K14794: ribosomal RNA-processing protein 12
15 Sobic.008G163500 WD domain, G-beta repeat domain containing protein, expressed K14552: NAN1, UTP17, NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
16 Sobic.009G101200 expressed protein K17973: NAA25, N-terminal acetyltransferase B complex non-catalytic subunit
17 Sobic.001G429600 HEAT repeat family protein, putative, expressed -
18 Sobic.004G030800 expressed protein -
19 Sobic.005G020000 pentatricopeptide, putative, expressed -
20 Sobic.007G014800 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G105101 Sobic002G105101 Sobic007G217100 Sobic007G217100 Sobic002G105101--Sobic007G217100 Sobic001G052400 Sobic001G052400 Sobic002G105101--Sobic001G052400 Sobic008G147200 Sobic008G147200 Sobic002G105101--Sobic008G147200 Sobic009G211200 Sobic009G211200 Sobic002G105101--Sobic009G211200 Sobic010G224700 Sobic010G224700 Sobic002G105101--Sobic010G224700 Sobic010G215900 Sobic010G215900 Sobic002G105101--Sobic010G215900 Sobic004G321700 Sobic004G321700 Sobic002G105101--Sobic004G321700 Sobic009G145101 Sobic009G145101 Sobic002G105101--Sobic009G145101 Sobic003G409200 Sobic003G409200 Sobic002G105101--Sobic003G409200 Sobic007G217100--Sobic001G052400 Sobic007G217100--Sobic002G105101 Sobic006G125900 Sobic006G125900 Sobic007G217100--Sobic006G125900 Sobic003G042400 Sobic003G042400 Sobic007G217100--Sobic003G042400 Sobic007G217100--Sobic004G321700 Sobic001G453400 Sobic001G453400 Sobic007G217100--Sobic001G453400 Sobic009G101200 Sobic009G101200 Sobic007G217100--Sobic009G101200 Sobic004G224600 Sobic004G224600 Sobic007G217100--Sobic004G224600 Sobic008G163500 Sobic008G163500 Sobic007G217100--Sobic008G163500 Sobic004G320500 Sobic004G320500 Sobic001G052400--Sobic004G320500 Sobic010G003400 Sobic010G003400 Sobic001G052400--Sobic010G003400 Sobic001G052400--Sobic001G453400 Sobic001G052400--Sobic007G217100 Sobic001G052400--Sobic003G042400 Sobic004G340400 Sobic004G340400 Sobic001G052400--Sobic004G340400 Sobic006G086600 Sobic006G086600 Sobic001G052400--Sobic006G086600 Sobic010G174700 Sobic010G174700 Sobic001G052400--Sobic010G174700 Sobic001G052400--Sobic006G125900 Sobic008G147200--Sobic004G321700 Sobic005G137700 Sobic005G137700 Sobic008G147200--Sobic005G137700 Sobic006G269800 Sobic006G269800 Sobic008G147200--Sobic006G269800 Sobic010G186600 Sobic010G186600 Sobic008G147200--Sobic010G186600 Sobic002G145800 Sobic002G145800 Sobic008G147200--Sobic002G145800 Sobic010G007100 Sobic010G007100 Sobic008G147200--Sobic010G007100 Sobic001G346900 Sobic001G346900 Sobic008G147200--Sobic001G346900 Sobic008G147200--Sobic003G042400 Sobic001G291800 Sobic001G291800 Sobic008G147200--Sobic001G291800 Sobic001G429600 Sobic001G429600 Sobic009G211200--Sobic001G429600 Sobic009G211200--Sobic006G125900 Sobic009G211200--Sobic004G224600 Sobic001G401500 Sobic001G401500 Sobic009G211200--Sobic001G401500 Sobic009G211200--Sobic002G105101 Sobic009G211200--Sobic009G101200 Sobic006G002800 Sobic006G002800 Sobic009G211200--Sobic006G002800 Sobic005G108000 Sobic005G108000 Sobic009G211200--Sobic005G108000 Sobic001G393900 Sobic001G393900 Sobic009G211200--Sobic001G393900 Sobic002G378100 Sobic002G378100 Sobic010G224700--Sobic002G378100 Sobic008G017100 Sobic008G017100 Sobic010G224700--Sobic008G017100 Sobic004G027300 Sobic004G027300 Sobic010G224700--Sobic004G027300 Sobic001G119600 Sobic001G119600 Sobic010G224700--Sobic001G119600 Sobic003G123200 Sobic003G123200 Sobic010G224700--Sobic003G123200 Sobic010G224700--Sobic008G163500 Sobic001G049800 Sobic001G049800 Sobic010G224700--Sobic001G049800 Sobic003G425100 Sobic003G425100 Sobic010G224700--Sobic003G425100 Sobic003G199300 Sobic003G199300 Sobic010G224700--Sobic003G199300 Sobic010G215900--Sobic003G409200 Sobic004G285000 Sobic004G285000 Sobic010G215900--Sobic004G285000 Sobic004G111000 Sobic004G111000 Sobic010G215900--Sobic004G111000 Sobic010G215900--Sobic001G346900 Sobic001G013300 Sobic001G013300 Sobic010G215900--Sobic001G013300 Sobic006G226300 Sobic006G226300 Sobic010G215900--Sobic006G226300 Sobic010G215900--Sobic008G147200 Sobic010G215900--Sobic003G042400 Sobic004G155600 Sobic004G155600 Sobic010G215900--Sobic004G155600 Sobic004G321700--Sobic008G147200 Sobic004G321700--Sobic001G393900 Sobic004G332400 Sobic004G332400 Sobic004G321700--Sobic004G332400 Sobic004G321700--Sobic001G346900 Sobic004G321700--Sobic006G002800 Sobic004G309900 Sobic004G309900 Sobic004G321700--Sobic004G309900 Sobic001G003500 Sobic001G003500 Sobic004G321700--Sobic001G003500 Sobic003G362900 Sobic003G362900 Sobic004G321700--Sobic003G362900 Sobic002G052700 Sobic002G052700 Sobic004G321700--Sobic002G052700 Sobic001G081000 Sobic001G081000 Sobic009G145101--Sobic001G081000 Sobic006G231800 Sobic006G231800 Sobic009G145101--Sobic006G231800 Sobic005G059200 Sobic005G059200 Sobic009G145101--Sobic005G059200 Sobic003G189333 Sobic003G189333 Sobic009G145101--Sobic003G189333 Sobic009G145101--Sobic002G105101 Sobic009G145101--Sobic006G226300 Sobic003G221600 Sobic003G221600 Sobic009G145101--Sobic003G221600 Sobic009G145101--Sobic007G217100 Sobic009G251200 Sobic009G251200 Sobic009G145101--Sobic009G251200 Sobic003G409200--Sobic001G346900 Sobic003G409200--Sobic010G215900 Sobic003G409200--Sobic004G111000 Sobic008G057000 Sobic008G057000 Sobic003G409200--Sobic008G057000 Sobic003G427100 Sobic003G427100 Sobic003G409200--Sobic003G427100 Sobic001G501800 Sobic001G501800 Sobic003G409200--Sobic001G501800 Sobic003G409200--Sobic004G285000 Sobic010G279900 Sobic010G279900 Sobic003G409200--Sobic010G279900 Sobic003G409200--Sobic002G145800
Octagon: transcription factors


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