Gene annotation
Transcriptome id Sobic.004G030800.2,Sobic.004G030800.1
Synonym
Functional annotation expressed protein
UniProt A0A194YNI8 , A0A194YMI8
Pfam PF08167
Panther DB PTHR34105
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G30240 : -
RAP-DB (Rice) LOC_Os05g22990.1 : expressed protein
MaizeGDB (Corn) Zm00025a018865
Brachypodium KQJ94583 , PNT66437
Barley HORVU4Hr1G024790.8 , HORVU4Hr1G024790.9 , HORVU4Hr1G024790.1 , HORVU4Hr1G024790.2 , HORVU4Hr1G024790.3 , HORVU4Hr1G024790.4 , HORVU4Hr1G024790.5 , HORVU4Hr1G024790.6 , HORVU4Hr1G024790.7 , HORVU4Hr1G024790.10
Wheat TraesCS4D02G130800 , TraesCS4A02G182400 , TraesCS4A02G182500 , TraesCS4B02G136000 , TraesCS4B02G136000 , TraesCS4B02G136000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G003400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
2 Sobic.001G052400 RNA recognition motif containing protein, putative, expressed K14573: NOP4, nucleolar protein 4
3 Sobic.004G025800 phosphoribosyl transferase, putative, expressed K00948: PRPS, ribose-phosphate pyrophosphokinase
4 Sobic.008G051200 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
5 Sobic.007G075800 GTPase of unknown function domain containing protein, putative, expressed -
6 Sobic.003G260400 ATP dependent DNA ligase family protein, putative, expressed K10747: DNA ligase 1
7 Sobic.009G101200 expressed protein K17973: NAA25, N-terminal acetyltransferase B complex non-catalytic subunit
8 Sobic.010G053600 pre-mRNA-processing-splicing factor 8, putative, expressed K12856: PRPF8, pre-mRNA-processing factor 8
9 Sobic.001G004400 - K14290: XPO1, exportin-1
10 Sobic.001G393900 FAD binding domain containing protein, expressed -
11 Sobic.003G059400 HEAT repeat family protein, putative, expressed K14550: UTP10, U3 small nucleolar RNA-associated protein 10
12 Sobic.003G441900 Leucine Rich Repeat family protein, expressed -
13 Sobic.004G320500 expressed protein K14794: ribosomal RNA-processing protein 12
14 Sobic.010G174700 expressed protein -
15 Sobic.010G079500 PHD-finger domain containing protein, putative, expressed -
16 Sobic.007G171100 peptidylprolyl isomerase domain and WD repeat-containing protein 1, putative, expressed K12736: peptidylprolyl isomerase domain and WD repeat-containing protein 1
17 Sobic.002G043100 histone deacetylase, putative, expressed K11407: histone deacetylase 6
18 Sobic.006G049900 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
19 Sobic.001G429600 HEAT repeat family protein, putative, expressed -
20 Sobic.004G332400 neurochondrin family protein, putative, expressed -


Gene co-expression network
sample Sobic004G030800 Sobic004G030800 Sobic010G003400 Sobic010G003400 Sobic004G030800--Sobic010G003400 Sobic001G052400 Sobic001G052400 Sobic004G030800--Sobic001G052400 Sobic004G025800 Sobic004G025800 Sobic004G030800--Sobic004G025800 Sobic008G051200 Sobic008G051200 Sobic004G030800--Sobic008G051200 Sobic007G075800 Sobic007G075800 Sobic004G030800--Sobic007G075800 Sobic003G260400 Sobic003G260400 Sobic004G030800--Sobic003G260400 Sobic009G101200 Sobic009G101200 Sobic004G030800--Sobic009G101200 Sobic010G053600 Sobic010G053600 Sobic004G030800--Sobic010G053600 Sobic001G004400 Sobic001G004400 Sobic004G030800--Sobic001G004400 Sobic006G086600 Sobic006G086600 Sobic010G003400--Sobic006G086600 Sobic001G453400 Sobic001G453400 Sobic010G003400--Sobic001G453400 Sobic010G003400--Sobic001G052400 Sobic010G003400--Sobic009G101200 Sobic010G003400--Sobic003G260400 Sobic010G003400--Sobic001G004400 Sobic004G320500 Sobic004G320500 Sobic010G003400--Sobic004G320500 Sobic001G089600 Sobic001G089600 Sobic010G003400--Sobic001G089600 Sobic010G003400--Sobic004G030800 Sobic001G052400--Sobic004G320500 Sobic001G052400--Sobic010G003400 Sobic001G052400--Sobic001G453400 Sobic007G217100 Sobic007G217100 Sobic001G052400--Sobic007G217100 Sobic003G042400 Sobic003G042400 Sobic001G052400--Sobic003G042400 Sobic004G340400 Sobic004G340400 Sobic001G052400--Sobic004G340400 Sobic001G052400--Sobic006G086600 Sobic010G174700 Sobic010G174700 Sobic001G052400--Sobic010G174700 Sobic006G125900 Sobic006G125900 Sobic001G052400--Sobic006G125900 Sobic003G391400 Sobic003G391400 Sobic004G025800--Sobic003G391400 Sobic004G025800--Sobic007G075800 Sobic003G033100 Sobic003G033100 Sobic004G025800--Sobic003G033100 Sobic004G025800--Sobic004G030800 Sobic010G051700 Sobic010G051700 Sobic004G025800--Sobic010G051700 Sobic001G172700 Sobic001G172700 Sobic004G025800--Sobic001G172700 Sobic003G101700 Sobic003G101700 Sobic004G025800--Sobic003G101700 Sobic002G418600 Sobic002G418600 Sobic004G025800--Sobic002G418600 Sobic005G142800 Sobic005G142800 Sobic004G025800--Sobic005G142800 Sobic004G171200 Sobic004G171200 Sobic008G051200--Sobic004G171200 Sobic001G251100 Sobic001G251100 Sobic008G051200--Sobic001G251100 Sobic008G051200--Sobic006G125900 Sobic004G185800 Sobic004G185800 Sobic008G051200--Sobic004G185800 Sobic001G493200 Sobic001G493200 Sobic008G051200--Sobic001G493200 Sobic008G051200--Sobic001G089600 Sobic008G051200--Sobic001G453400 Sobic001G393900 Sobic001G393900 Sobic008G051200--Sobic001G393900 Sobic008G051200--Sobic004G030800 Sobic002G031700 Sobic002G031700 Sobic007G075800--Sobic002G031700 Sobic002G155000 Sobic002G155000 Sobic007G075800--Sobic002G155000 Sobic007G075800--Sobic004G025800 Sobic007G075800--Sobic004G030800 Sobic008G165900 Sobic008G165900 Sobic007G075800--Sobic008G165900 Sobic006G128400 Sobic006G128400 Sobic007G075800--Sobic006G128400 Sobic007G075800--Sobic008G051200 Sobic006G049900 Sobic006G049900 Sobic007G075800--Sobic006G049900 Sobic002G318800 Sobic002G318800 Sobic007G075800--Sobic002G318800 Sobic010G079500 Sobic010G079500 Sobic003G260400--Sobic010G079500 Sobic003G095900 Sobic003G095900 Sobic003G260400--Sobic003G095900 Sobic002G399800 Sobic002G399800 Sobic003G260400--Sobic002G399800 Sobic003G260400--Sobic003G101700 Sobic002G316600 Sobic002G316600 Sobic003G260400--Sobic002G316600 Sobic003G260400--Sobic010G003400 Sobic003G260400--Sobic001G089600 Sobic003G260400--Sobic001G453400 Sobic003G260400--Sobic001G393900 Sobic009G101200--Sobic006G086600 Sobic009G101200--Sobic010G003400 Sobic001G145400 Sobic001G145400 Sobic009G101200--Sobic001G145400 Sobic001G259000 Sobic001G259000 Sobic009G101200--Sobic001G259000 Sobic004G085000 Sobic004G085000 Sobic009G101200--Sobic004G085000 Sobic009G101200--Sobic001G052400 Sobic009G246500 Sobic009G246500 Sobic009G101200--Sobic009G246500 Sobic001G429600 Sobic001G429600 Sobic009G101200--Sobic001G429600 Sobic006G049600 Sobic006G049600 Sobic009G101200--Sobic006G049600 Sobic001G352900 Sobic001G352900 Sobic010G053600--Sobic001G352900 Sobic002G391600 Sobic002G391600 Sobic010G053600--Sobic002G391600 Sobic009G109200 Sobic009G109200 Sobic010G053600--Sobic009G109200 Sobic010G053600--Sobic001G004400 Sobic007G171100 Sobic007G171100 Sobic010G053600--Sobic007G171100 Sobic004G260100 Sobic004G260100 Sobic010G053600--Sobic004G260100 Sobic006G036100 Sobic006G036100 Sobic010G053600--Sobic006G036100 Sobic004G248600 Sobic004G248600 Sobic010G053600--Sobic004G248600 Sobic004G242400 Sobic004G242400 Sobic010G053600--Sobic004G242400 Sobic002G133300 Sobic002G133300 Sobic001G004400--Sobic002G133300 Sobic001G110600 Sobic001G110600 Sobic001G004400--Sobic001G110600 Sobic007G054800 Sobic007G054800 Sobic001G004400--Sobic007G054800 Sobic001G004400--Sobic004G248600 Sobic003G312100 Sobic003G312100 Sobic001G004400--Sobic003G312100 Sobic001G493700 Sobic001G493700 Sobic001G004400--Sobic001G493700 Sobic003G221400 Sobic003G221400 Sobic001G004400--Sobic003G221400 Sobic004G276400 Sobic004G276400 Sobic001G004400--Sobic004G276400 Sobic002G179400 Sobic002G179400 Sobic001G004400--Sobic002G179400
Octagon: transcription factors


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