Gene annotation
Transcriptome id Sobic.007G171100.1,Sobic.007G171100.2
Synonym Sb07g024330, CYP71
Functional annotation peptidylprolyl isomerase domain and WD repeat-containing protein 1, putative, expressed
UniProt C5YN92
Pfam PF00160
Panther DB PTHR11071 PTHR11071:SF213
NCBI CDD -
KEGG Orthology K12736; peptidylprolyl isomerase domain and WD repeat-containing protein 1
Gene Ontology GO:0006457; protein folding GO:0003755peptidyl-prolyl cis-trans isomerase activity GO:0000413protein peptidyl-prolyl isomerization


Orthologs (automatic annotation)
TAIR AT3G44600 : cyclophilin71
RAP-DB (Rice) LOC_Os08g44330.1 : peptidylprolyl isomerase domain and WD repeat-containing protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a030572
Brachypodium KQJ99346
Barley HORVU7Hr1G058730.6 , HORVU7Hr1G058730.9 , HORVU7Hr1G058730.5 , HORVU7Hr1G058730.2 , HORVU7Hr1G058730.3 , HORVU7Hr1G058730.10 , HORVU7Hr1G058730.12 , HORVU7Hr1G058730.13 , HORVU7Hr1G058730.18
Wheat TraesCS7B02G175400 , TraesCS7A02G277700 , TraesCS7D02G277600
Populus -


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cDNA sequences
Sobic.007G171100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G071400 PPR repeat domain containing protein, putative, expressed -
2 Sobic.010G053600 pre-mRNA-processing-splicing factor 8, putative, expressed K12856: PRPF8, pre-mRNA-processing factor 8
3 Sobic.001G352900 intron-binding protein aquarius, putative, expressed K12874: intron-binding protein aquarius
4 Sobic.002G043100 histone deacetylase, putative, expressed K11407: histone deacetylase 6
5 Sobic.008G017100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
6 Sobic.004G019200 DNA-directed RNA polymerase I subunit RPA2, putative, expressed K03002: RPA2, DNA-directed RNA polymerase I subunit RPA2
7 Sobic.010G174700 expressed protein -
8 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
9 Sobic.006G036100 expressed protein K11266: MAternally affected uncoordination
10 Sobic.004G260100 tetratricopeptide repeat, putative, expressed K03255: TIF31, protein TIF31
11 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
12 Sobic.006G137600 AT hook motif family protein, expressed -
13 Sobic.009G158100 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
14 Sobic.001G004400 - K14290: XPO1, exportin-1
15 Sobic.001G451300 NUP155, putative, expressed K14312: NUP155, NUP170, nuclear pore complex protein Nup155
16 Sobic.004G034700 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
17 Sobic.002G425500 ATPOT1, putative, expressed -
18 Sobic.001G393900 FAD binding domain containing protein, expressed -
19 Sobic.001G089600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
20 Sobic.004G030800 expressed protein -


Gene co-expression network
sample Sobic007G171100 Sobic007G171100 Sobic007G071400 Sobic007G071400 Sobic007G171100--Sobic007G071400 Sobic010G053600 Sobic010G053600 Sobic007G171100--Sobic010G053600 Sobic001G352900 Sobic001G352900 Sobic007G171100--Sobic001G352900 Sobic002G043100 Sobic002G043100 Sobic007G171100--Sobic002G043100 Sobic008G017100 Sobic008G017100 Sobic007G171100--Sobic008G017100 Sobic004G019200 Sobic004G019200 Sobic007G171100--Sobic004G019200 Sobic010G174700 Sobic010G174700 Sobic007G171100--Sobic010G174700 Sobic001G020000 Sobic001G020000 Sobic007G171100--Sobic001G020000 Sobic006G036100 Sobic006G036100 Sobic007G171100--Sobic006G036100 Sobic007G071400--Sobic007G171100 Sobic010G115400 Sobic010G115400 Sobic007G071400--Sobic010G115400 Sobic007G071400--Sobic004G019200 Sobic001G089600 Sobic001G089600 Sobic007G071400--Sobic001G089600 Sobic010G051700 Sobic010G051700 Sobic007G071400--Sobic010G051700 Sobic003G369400 Sobic003G369400 Sobic007G071400--Sobic003G369400 Sobic007G071400--Sobic010G174700 Sobic002G133300 Sobic002G133300 Sobic007G071400--Sobic002G133300 Sobic007G071400--Sobic001G352900 Sobic010G053600--Sobic001G352900 Sobic002G391600 Sobic002G391600 Sobic010G053600--Sobic002G391600 Sobic009G109200 Sobic009G109200 Sobic010G053600--Sobic009G109200 Sobic001G004400 Sobic001G004400 Sobic010G053600--Sobic001G004400 Sobic010G053600--Sobic007G171100 Sobic004G260100 Sobic004G260100 Sobic010G053600--Sobic004G260100 Sobic010G053600--Sobic006G036100 Sobic004G248600 Sobic004G248600 Sobic010G053600--Sobic004G248600 Sobic004G242400 Sobic004G242400 Sobic010G053600--Sobic004G242400 Sobic001G352900--Sobic010G053600 Sobic001G352900--Sobic002G391600 Sobic001G352900--Sobic004G242400 Sobic010G001100 Sobic010G001100 Sobic001G352900--Sobic010G001100 Sobic001G352900--Sobic009G109200 Sobic002G317200 Sobic002G317200 Sobic001G352900--Sobic002G317200 Sobic002G397500 Sobic002G397500 Sobic001G352900--Sobic002G397500 Sobic001G219600 Sobic001G219600 Sobic001G352900--Sobic001G219600 Sobic003G293200 Sobic003G293200 Sobic001G352900--Sobic003G293200 Sobic004G107200 Sobic004G107200 Sobic002G043100--Sobic004G107200 Sobic001G451300 Sobic001G451300 Sobic002G043100--Sobic001G451300 Sobic001G501800 Sobic001G501800 Sobic002G043100--Sobic001G501800 Sobic002G399800 Sobic002G399800 Sobic002G043100--Sobic002G399800 Sobic010G262100 Sobic010G262100 Sobic002G043100--Sobic010G262100 Sobic006G269800 Sobic006G269800 Sobic002G043100--Sobic006G269800 Sobic003G309050 Sobic003G309050 Sobic002G043100--Sobic003G309050 Sobic002G425500 Sobic002G425500 Sobic002G043100--Sobic002G425500 Sobic001G393900 Sobic001G393900 Sobic002G043100--Sobic001G393900 Sobic004G119400 Sobic004G119400 Sobic008G017100--Sobic004G119400 Sobic008G017100--Sobic006G269800 Sobic010G224700 Sobic010G224700 Sobic008G017100--Sobic010G224700 Sobic006G185200 Sobic006G185200 Sobic008G017100--Sobic006G185200 Sobic002G079100 Sobic002G079100 Sobic008G017100--Sobic002G079100 Sobic002G378100 Sobic002G378100 Sobic008G017100--Sobic002G378100 Sobic004G351800 Sobic004G351800 Sobic008G017100--Sobic004G351800 Sobic008G017100--Sobic007G171100 Sobic008G147200 Sobic008G147200 Sobic008G017100--Sobic008G147200 Sobic003G308500 Sobic003G308500 Sobic004G019200--Sobic003G308500 Sobic004G019200--Sobic002G317200 Sobic004G019200--Sobic001G089600 Sobic001G145400 Sobic001G145400 Sobic004G019200--Sobic001G145400 Sobic004G019200--Sobic001G020000 Sobic001G429600 Sobic001G429600 Sobic004G019200--Sobic001G429600 Sobic004G019200--Sobic010G115400 Sobic006G086600 Sobic006G086600 Sobic004G019200--Sobic006G086600 Sobic004G019200--Sobic002G399800 Sobic010G174700--Sobic006G036100 Sobic010G174700--Sobic001G352900 Sobic010G174700--Sobic001G089600 Sobic001G052400 Sobic001G052400 Sobic010G174700--Sobic001G052400 Sobic002G145800 Sobic002G145800 Sobic010G174700--Sobic002G145800 Sobic010G174700--Sobic001G451300 Sobic010G174700--Sobic010G053600 Sobic001G453400 Sobic001G453400 Sobic010G174700--Sobic001G453400 Sobic005G220000 Sobic005G220000 Sobic010G174700--Sobic005G220000 Sobic001G020000--Sobic001G219600 Sobic001G433800 Sobic001G433800 Sobic001G020000--Sobic001G433800 Sobic001G020000--Sobic002G317200 Sobic001G354600 Sobic001G354600 Sobic001G020000--Sobic001G354600 Sobic001G087600 Sobic001G087600 Sobic001G020000--Sobic001G087600 Sobic001G020000--Sobic002G425500 Sobic003G095900 Sobic003G095900 Sobic001G020000--Sobic003G095900 Sobic001G020000--Sobic001G352900 Sobic004G124300 Sobic004G124300 Sobic001G020000--Sobic004G124300 Sobic006G036100--Sobic010G174700 Sobic001G540800 Sobic001G540800 Sobic006G036100--Sobic001G540800 Sobic006G036100--Sobic010G053600 Sobic006G036100--Sobic001G004400 Sobic006G036100--Sobic002G391600 Sobic006G036100--Sobic002G133300 Sobic003G266001 Sobic003G266001 Sobic006G036100--Sobic003G266001 Sobic003G294600 Sobic003G294600 Sobic006G036100--Sobic003G294600 Sobic006G036100--Sobic001G352900
Octagon: transcription factors


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