Gene annotation
Transcriptome id Sobic.006G036100.2,Sobic.006G036100.1
Synonym Sb06g004980
Functional annotation expressed protein
UniProt A0A1B6PJV5
Pfam -
Panther DB PTHR21394
NCBI CDD KOG2300; Uncharacterized conserved protein
KEGG Orthology K11266; MAternally affected uncoordination
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G51340 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os04g28010.1 : expressed protein
MaizeGDB (Corn) Zm00025a024955 , Zm00025a033139
Brachypodium KQJ82077
Barley HORVU0Hr1G003910.1 , HORVU0Hr1G003910.3 , HORVU0Hr1G003910.6 , HORVU0Hr1G003910.2 , HORVU0Hr1G003910.5 , HORVU0Hr1G003910.4
Wheat TraesCS2B02G292400 , TraesCS2A02G274200 , TraesCS2A02G274200 , TraesCS2D02G274000 , TraesCS2D02G274000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G174700 expressed protein -
2 Sobic.001G540800 DNA binding protein, putative, expressed -
3 Sobic.010G053600 pre-mRNA-processing-splicing factor 8, putative, expressed K12856: PRPF8, pre-mRNA-processing factor 8
4 Sobic.001G004400 - K14290: XPO1, exportin-1
5 Sobic.002G391600 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K12854: SNRNP200, pre-mRNA-splicing helicase BRR2
6 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
7 Sobic.003G266001 - -
8 Sobic.003G294600 Homeobox domain containing protein, expressed -
9 Sobic.001G352900 intron-binding protein aquarius, putative, expressed K12874: intron-binding protein aquarius
10 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
11 Sobic.002G425500 ATPOT1, putative, expressed -
12 Sobic.005G106500 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K11165: dehydrogenase/reductase SDR family member 7
13 Sobic.006G073200 OTU-like cysteine protease family protein, putative, expressed K12655: OTUD5, OTU domain-containing protein 5
14 Sobic.004G034700 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
15 Sobic.004G131300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
16 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
17 Sobic.001G058200 PPR repeat domain containing protein, putative, expressed -
18 Sobic.007G171100 peptidylprolyl isomerase domain and WD repeat-containing protein 1, putative, expressed K12736: peptidylprolyl isomerase domain and WD repeat-containing protein 1
19 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
20 Sobic.006G049900 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2


Gene co-expression network
sample Sobic006G036100 Sobic006G036100 Sobic010G174700 Sobic010G174700 Sobic006G036100--Sobic010G174700 Sobic001G540800 Sobic001G540800 Sobic006G036100--Sobic001G540800 Sobic010G053600 Sobic010G053600 Sobic006G036100--Sobic010G053600 Sobic001G004400 Sobic001G004400 Sobic006G036100--Sobic001G004400 Sobic002G391600 Sobic002G391600 Sobic006G036100--Sobic002G391600 Sobic002G133300 Sobic002G133300 Sobic006G036100--Sobic002G133300 Sobic003G266001 Sobic003G266001 Sobic006G036100--Sobic003G266001 Sobic003G294600 Sobic003G294600 Sobic006G036100--Sobic003G294600 Sobic001G352900 Sobic001G352900 Sobic006G036100--Sobic001G352900 Sobic010G174700--Sobic006G036100 Sobic010G174700--Sobic001G352900 Sobic001G089600 Sobic001G089600 Sobic010G174700--Sobic001G089600 Sobic001G052400 Sobic001G052400 Sobic010G174700--Sobic001G052400 Sobic002G145800 Sobic002G145800 Sobic010G174700--Sobic002G145800 Sobic001G451300 Sobic001G451300 Sobic010G174700--Sobic001G451300 Sobic010G174700--Sobic010G053600 Sobic001G453400 Sobic001G453400 Sobic010G174700--Sobic001G453400 Sobic005G220000 Sobic005G220000 Sobic010G174700--Sobic005G220000 Sobic001G540800--Sobic006G036100 Sobic002G425500 Sobic002G425500 Sobic001G540800--Sobic002G425500 Sobic001G540800--Sobic002G145800 Sobic010G145800 Sobic010G145800 Sobic001G540800--Sobic010G145800 Sobic004G019500 Sobic004G019500 Sobic001G540800--Sobic004G019500 Sobic001G227200 Sobic001G227200 Sobic001G540800--Sobic001G227200 Sobic006G269800 Sobic006G269800 Sobic001G540800--Sobic006G269800 Sobic001G020000 Sobic001G020000 Sobic001G540800--Sobic001G020000 Sobic002G309200 Sobic002G309200 Sobic001G540800--Sobic002G309200 Sobic010G053600--Sobic001G352900 Sobic010G053600--Sobic002G391600 Sobic009G109200 Sobic009G109200 Sobic010G053600--Sobic009G109200 Sobic010G053600--Sobic001G004400 Sobic007G171100 Sobic007G171100 Sobic010G053600--Sobic007G171100 Sobic004G260100 Sobic004G260100 Sobic010G053600--Sobic004G260100 Sobic010G053600--Sobic006G036100 Sobic004G248600 Sobic004G248600 Sobic010G053600--Sobic004G248600 Sobic004G242400 Sobic004G242400 Sobic010G053600--Sobic004G242400 Sobic001G004400--Sobic002G133300 Sobic001G110600 Sobic001G110600 Sobic001G004400--Sobic001G110600 Sobic007G054800 Sobic007G054800 Sobic001G004400--Sobic007G054800 Sobic001G004400--Sobic004G248600 Sobic003G312100 Sobic003G312100 Sobic001G004400--Sobic003G312100 Sobic001G493700 Sobic001G493700 Sobic001G004400--Sobic001G493700 Sobic003G221400 Sobic003G221400 Sobic001G004400--Sobic003G221400 Sobic004G276400 Sobic004G276400 Sobic001G004400--Sobic004G276400 Sobic002G179400 Sobic002G179400 Sobic001G004400--Sobic002G179400 Sobic002G391600--Sobic010G053600 Sobic002G391600--Sobic001G352900 Sobic008G016300 Sobic008G016300 Sobic002G391600--Sobic008G016300 Sobic002G391600--Sobic004G242400 Sobic009G256300 Sobic009G256300 Sobic002G391600--Sobic009G256300 Sobic010G105200 Sobic010G105200 Sobic002G391600--Sobic010G105200 Sobic002G391600--Sobic009G109200 Sobic010G010700 Sobic010G010700 Sobic002G391600--Sobic010G010700 Sobic002G391600--Sobic002G133300 Sobic002G133300--Sobic004G276400 Sobic001G433800 Sobic001G433800 Sobic002G133300--Sobic001G433800 Sobic002G133300--Sobic001G004400 Sobic001G289800 Sobic001G289800 Sobic002G133300--Sobic001G289800 Sobic003G072200 Sobic003G072200 Sobic002G133300--Sobic003G072200 Sobic002G397500 Sobic002G397500 Sobic002G133300--Sobic002G397500 Sobic004G131300 Sobic004G131300 Sobic002G133300--Sobic004G131300 Sobic001G194200 Sobic001G194200 Sobic002G133300--Sobic001G194200 Sobic002G133300--Sobic001G493700 Sobic001G493200 Sobic001G493200 Sobic003G266001--Sobic001G493200 Sobic005G128400 Sobic005G128400 Sobic003G266001--Sobic005G128400 Sobic008G103200 Sobic008G103200 Sobic003G266001--Sobic008G103200 Sobic010G069100 Sobic010G069100 Sobic003G266001--Sobic010G069100 Sobic003G408600 Sobic003G408600 Sobic003G266001--Sobic003G408600 Sobic004G072100 Sobic004G072100 Sobic003G266001--Sobic004G072100 Sobic004G021200 Sobic004G021200 Sobic003G266001--Sobic004G021200 Sobic001G311500 Sobic001G311500 Sobic003G266001--Sobic001G311500 Sobic007G159900 Sobic007G159900 Sobic003G266001--Sobic007G159900 Sobic008G002500 Sobic008G002500 Sobic003G294600--Sobic008G002500 Sobic009G142000 Sobic009G142000 Sobic003G294600--Sobic009G142000 Sobic009G088000 Sobic009G088000 Sobic003G294600--Sobic009G088000 Sobic001G453000 Sobic001G453000 Sobic003G294600--Sobic001G453000 Sobic010G148932 Sobic010G148932 Sobic003G294600--Sobic010G148932 Sobic007G077900 Sobic007G077900 Sobic003G294600--Sobic007G077900 Sobic006G040800 Sobic006G040800 Sobic003G294600--Sobic006G040800 Sobic003G445500 Sobic003G445500 Sobic003G294600--Sobic003G445500 Sobic003G294600--Sobic010G053600 Sobic001G352900--Sobic010G053600 Sobic001G352900--Sobic002G391600 Sobic001G352900--Sobic004G242400 Sobic010G001100 Sobic010G001100 Sobic001G352900--Sobic010G001100 Sobic001G352900--Sobic009G109200 Sobic002G317200 Sobic002G317200 Sobic001G352900--Sobic002G317200 Sobic001G352900--Sobic002G397500 Sobic001G219600 Sobic001G219600 Sobic001G352900--Sobic001G219600 Sobic003G293200 Sobic003G293200 Sobic001G352900--Sobic003G293200
Octagon: transcription factors


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