Gene annotation
Transcriptome id Sobic.010G174700.1,Sobic.010G174700.2
Synonym Sb10g022700
Functional annotation expressed protein
UniProt C5Z544 , A0A1W0VTN6
Pfam PF08621 PF08620
Panther DB PTHR21483 PTHR21483:SF18
NCBI CDD KOG4732; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38440 : -
RAP-DB (Rice) LOC_Os06g37640.1 : expressed protein
MaizeGDB (Corn) Zm00025a051134
Brachypodium KQK17885
Barley HORVU7Hr1G086420.11 , HORVU7Hr1G086420.10 , HORVU7Hr1G086420.13 , HORVU7Hr1G086420.12 , HORVU7Hr1G086420.15 , HORVU7Hr1G086420.14 , HORVU7Hr1G086420.16 , HORVU7Hr1G086420.5 , HORVU7Hr1G086420.9 , HORVU7Hr1G086420.8 , HORVU7Hr1G086420.4 , HORVU7Hr1G086420.7 , HORVU7Hr1G086420.6 , HORVU7Hr1G086420.1 , HORVU7Hr1G086420.3 , HORVU7Hr1G086420.2 , HORVU7Hr1G086420.17
Wheat TraesCS7D02G358700 , TraesCS7A02G364300 , TraesCS7B02G263600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G036100 expressed protein K11266: MAternally affected uncoordination
2 Sobic.001G352900 intron-binding protein aquarius, putative, expressed K12874: intron-binding protein aquarius
3 Sobic.001G089600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
4 Sobic.001G052400 RNA recognition motif containing protein, putative, expressed K14573: NOP4, nucleolar protein 4
5 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
6 Sobic.001G451300 NUP155, putative, expressed K14312: NUP155, NUP170, nuclear pore complex protein Nup155
7 Sobic.010G053600 pre-mRNA-processing-splicing factor 8, putative, expressed K12856: PRPF8, pre-mRNA-processing factor 8
8 Sobic.001G453400 CCAAT/enhancer-binding protein, putative, expressed K14832: MAK21, NOC1, ribosome biogenesis protein MAK21
9 Sobic.005G220000 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
10 Sobic.001G004400 - K14290: XPO1, exportin-1
11 Sobic.001G393900 FAD binding domain containing protein, expressed -
12 Sobic.006G125900 elongator complex protein 3, putative, expressed K07739: ELP3, elongator complex protein 3
13 Sobic.004G256500 WD domain, G-beta repeat domain containing protein, expressed K12616: enhancer of mRNA-decapping protein 4
14 Sobic.001G058200 PPR repeat domain containing protein, putative, expressed -
15 Sobic.002G399800 PWWP domain containing protein, expressed -
16 Sobic.010G115400 pentatricopeptide, putative, expressed -
17 Sobic.003G188400 glutamate dehydrogenase protein, putative, expressed K00262: E1.4.1.4, glutamate dehydrogenase (NADP+)
18 Sobic.009G109200 phosphatidylinositol kinase, putative, expressed K07203: MTOR, FRAP, serine/threonine-protein kinase mTOR
19 Sobic.004G085000 expressed protein K14310: NUP205, nuclear pore complex protein Nup205
20 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11


Gene co-expression network
sample Sobic010G174700 Sobic010G174700 Sobic006G036100 Sobic006G036100 Sobic010G174700--Sobic006G036100 Sobic001G352900 Sobic001G352900 Sobic010G174700--Sobic001G352900 Sobic001G089600 Sobic001G089600 Sobic010G174700--Sobic001G089600 Sobic001G052400 Sobic001G052400 Sobic010G174700--Sobic001G052400 Sobic002G145800 Sobic002G145800 Sobic010G174700--Sobic002G145800 Sobic001G451300 Sobic001G451300 Sobic010G174700--Sobic001G451300 Sobic010G053600 Sobic010G053600 Sobic010G174700--Sobic010G053600 Sobic001G453400 Sobic001G453400 Sobic010G174700--Sobic001G453400 Sobic005G220000 Sobic005G220000 Sobic010G174700--Sobic005G220000 Sobic006G036100--Sobic010G174700 Sobic001G540800 Sobic001G540800 Sobic006G036100--Sobic001G540800 Sobic006G036100--Sobic010G053600 Sobic001G004400 Sobic001G004400 Sobic006G036100--Sobic001G004400 Sobic002G391600 Sobic002G391600 Sobic006G036100--Sobic002G391600 Sobic002G133300 Sobic002G133300 Sobic006G036100--Sobic002G133300 Sobic003G266001 Sobic003G266001 Sobic006G036100--Sobic003G266001 Sobic003G294600 Sobic003G294600 Sobic006G036100--Sobic003G294600 Sobic006G036100--Sobic001G352900 Sobic001G352900--Sobic010G053600 Sobic001G352900--Sobic002G391600 Sobic004G242400 Sobic004G242400 Sobic001G352900--Sobic004G242400 Sobic010G001100 Sobic010G001100 Sobic001G352900--Sobic010G001100 Sobic009G109200 Sobic009G109200 Sobic001G352900--Sobic009G109200 Sobic002G317200 Sobic002G317200 Sobic001G352900--Sobic002G317200 Sobic002G397500 Sobic002G397500 Sobic001G352900--Sobic002G397500 Sobic001G219600 Sobic001G219600 Sobic001G352900--Sobic001G219600 Sobic003G293200 Sobic003G293200 Sobic001G352900--Sobic003G293200 Sobic003G095900 Sobic003G095900 Sobic001G089600--Sobic003G095900 Sobic006G086600 Sobic006G086600 Sobic001G089600--Sobic006G086600 Sobic010G115400 Sobic010G115400 Sobic001G089600--Sobic010G115400 Sobic001G493700 Sobic001G493700 Sobic001G089600--Sobic001G493700 Sobic001G089600--Sobic002G397500 Sobic004G260100 Sobic004G260100 Sobic001G089600--Sobic004G260100 Sobic004G248600 Sobic004G248600 Sobic001G089600--Sobic004G248600 Sobic004G322400 Sobic004G322400 Sobic001G089600--Sobic004G322400 Sobic009G084900 Sobic009G084900 Sobic001G089600--Sobic009G084900 Sobic004G320500 Sobic004G320500 Sobic001G052400--Sobic004G320500 Sobic010G003400 Sobic010G003400 Sobic001G052400--Sobic010G003400 Sobic001G052400--Sobic001G453400 Sobic007G217100 Sobic007G217100 Sobic001G052400--Sobic007G217100 Sobic003G042400 Sobic003G042400 Sobic001G052400--Sobic003G042400 Sobic004G340400 Sobic004G340400 Sobic001G052400--Sobic004G340400 Sobic001G052400--Sobic006G086600 Sobic001G052400--Sobic010G174700 Sobic006G125900 Sobic006G125900 Sobic001G052400--Sobic006G125900 Sobic006G269800 Sobic006G269800 Sobic002G145800--Sobic006G269800 Sobic003G416700 Sobic003G416700 Sobic002G145800--Sobic003G416700 Sobic007G183300 Sobic007G183300 Sobic002G145800--Sobic007G183300 Sobic001G087600 Sobic001G087600 Sobic002G145800--Sobic001G087600 Sobic001G051700 Sobic001G051700 Sobic002G145800--Sobic001G051700 Sobic003G062300 Sobic003G062300 Sobic002G145800--Sobic003G062300 Sobic008G147200 Sobic008G147200 Sobic002G145800--Sobic008G147200 Sobic001G023000 Sobic001G023000 Sobic002G145800--Sobic001G023000 Sobic010G186600 Sobic010G186600 Sobic002G145800--Sobic010G186600 Sobic010G262100 Sobic010G262100 Sobic001G451300--Sobic010G262100 Sobic004G034700 Sobic004G034700 Sobic001G451300--Sobic004G034700 Sobic010G138900 Sobic010G138900 Sobic001G451300--Sobic010G138900 Sobic002G043100 Sobic002G043100 Sobic001G451300--Sobic002G043100 Sobic003G309050 Sobic003G309050 Sobic001G451300--Sobic003G309050 Sobic001G451300--Sobic010G174700 Sobic002G371600 Sobic002G371600 Sobic001G451300--Sobic002G371600 Sobic009G142000 Sobic009G142000 Sobic001G451300--Sobic009G142000 Sobic002G399800 Sobic002G399800 Sobic001G451300--Sobic002G399800 Sobic010G053600--Sobic001G352900 Sobic010G053600--Sobic002G391600 Sobic010G053600--Sobic009G109200 Sobic010G053600--Sobic001G004400 Sobic007G171100 Sobic007G171100 Sobic010G053600--Sobic007G171100 Sobic010G053600--Sobic004G260100 Sobic010G053600--Sobic006G036100 Sobic010G053600--Sobic004G248600 Sobic010G053600--Sobic004G242400 Sobic001G453400--Sobic010G003400 Sobic001G453400--Sobic006G086600 Sobic001G376900 Sobic001G376900 Sobic001G453400--Sobic001G376900 Sobic003G156500 Sobic003G156500 Sobic001G453400--Sobic003G156500 Sobic001G453400--Sobic001G052400 Sobic001G453400--Sobic001G089600 Sobic001G453400--Sobic006G125900 Sobic007G106700 Sobic007G106700 Sobic001G453400--Sobic007G106700 Sobic010G114900 Sobic010G114900 Sobic001G453400--Sobic010G114900 Sobic001G111600 Sobic001G111600 Sobic005G220000--Sobic001G111600 Sobic005G220000--Sobic002G145800 Sobic007G183900 Sobic007G183900 Sobic005G220000--Sobic007G183900 Sobic005G128400 Sobic005G128400 Sobic005G220000--Sobic005G128400 Sobic005G220000--Sobic003G293200 Sobic005G220000--Sobic007G183300 Sobic005G220000--Sobic003G062300 Sobic010G085200 Sobic010G085200 Sobic005G220000--Sobic010G085200 Sobic001G026500 Sobic001G026500 Sobic005G220000--Sobic001G026500
Octagon: transcription factors


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