Gene annotation
Transcriptome id Sobic.006G154100.1,Sobic.006G154100.2
Synonym Sb06g023140
Functional annotation mRNA cap guanine-N7 methyltransferase 2, putative, expressed
UniProt C5YCH9 , A0A097PS49
Pfam PF13847
Panther DB PTHR12189
NCBI CDD KOG1975; mRNA cap methyltransferase
KEGG Orthology K00565; mRNA (guanine-N7-)-methyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52210 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os02g54000.1 : mRNA cap guanine-N7 methyltransferase 2, putative, expressed
MaizeGDB (Corn) Zm00025a022234 , Zm00025a046689 , Zm00025a010596
Brachypodium KQJ83687 , KQJ83686
Barley -
Wheat TraesCS2B02G392800 , TraesCS2B02G392800 , TraesCS2A02G375900 , TraesCS2A02G375900 , TraesCS2D02G372100 , TraesCS2D02G372100
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.006G154100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G127200 CRAL/TRIO domain containing protein, expressed -
2 Sobic.001G034500 SEC14 cytosolic factor family protein, putative, expressed -
3 Sobic.005G114500 growth regulator related protein, putative, expressed -
4 Sobic.001G097500 expressed protein -
5 Sobic.006G270600 PSF1 - Putative GINS complex subunit, expressed K10732: GINS1, GINS complex subunit 1
6 Sobic.006G002800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K15332: tRNA (uracil-5-)-methyltransferase
7 Sobic.003G230600 transcription factor X1, putative, expressed -
8 Sobic.004G017300 adaptor complexes medium subunit family domain containing protein, expressed K12398: AP-3 complex subunit mu
9 Sobic.003G006400 metallo-beta-lactamase family protein, putative, expressed K00784: ribonuclease Z
10 Sobic.004G224600 expressed protein -
11 Sobic.007G187600 pentatricopeptide, putative, expressed -
12 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
13 Sobic.001G413800 expressed protein K13141: integrator complex subunit 4
14 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
15 Sobic.006G281700 DUF803 domain containing, putative, expressed -
16 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
17 Sobic.001G542450 - -
18 Sobic.003G416700 homeobox domain containing protein, expressed -
19 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
20 Sobic.009G003700 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C


Gene co-expression network
sample Sobic006G154100 Sobic006G154100 Sobic002G127200 Sobic002G127200 Sobic006G154100--Sobic002G127200 Sobic001G034500 Sobic001G034500 Sobic006G154100--Sobic001G034500 Sobic005G114500 Sobic005G114500 Sobic006G154100--Sobic005G114500 Sobic001G097500 Sobic001G097500 Sobic006G154100--Sobic001G097500 Sobic006G270600 Sobic006G270600 Sobic006G154100--Sobic006G270600 Sobic006G002800 Sobic006G002800 Sobic006G154100--Sobic006G002800 Sobic003G230600 Sobic003G230600 Sobic006G154100--Sobic003G230600 Sobic004G017300 Sobic004G017300 Sobic006G154100--Sobic004G017300 Sobic003G006400 Sobic003G006400 Sobic006G154100--Sobic003G006400 Sobic001G346900 Sobic001G346900 Sobic002G127200--Sobic001G346900 Sobic002G127200--Sobic006G154100 Sobic005G108000 Sobic005G108000 Sobic002G127200--Sobic005G108000 Sobic010G080550 Sobic010G080550 Sobic002G127200--Sobic010G080550 Sobic003G312700 Sobic003G312700 Sobic002G127200--Sobic003G312700 Sobic004G085000 Sobic004G085000 Sobic002G127200--Sobic004G085000 Sobic004G086200 Sobic004G086200 Sobic002G127200--Sobic004G086200 Sobic003G416700 Sobic003G416700 Sobic002G127200--Sobic003G416700 Sobic002G127200--Sobic003G230600 Sobic001G477700 Sobic001G477700 Sobic001G034500--Sobic001G477700 Sobic003G284000 Sobic003G284000 Sobic001G034500--Sobic003G284000 Sobic001G034500--Sobic006G154100 Sobic001G004100 Sobic001G004100 Sobic001G034500--Sobic001G004100 Sobic001G135500 Sobic001G135500 Sobic001G034500--Sobic001G135500 Sobic001G413800 Sobic001G413800 Sobic001G034500--Sobic001G413800 Sobic003G212900 Sobic003G212900 Sobic001G034500--Sobic003G212900 Sobic001G034500--Sobic001G097500 Sobic007G042900 Sobic007G042900 Sobic001G034500--Sobic007G042900 Sobic003G130900 Sobic003G130900 Sobic005G114500--Sobic003G130900 Sobic005G114500--Sobic003G230600 Sobic001G474400 Sobic001G474400 Sobic005G114500--Sobic001G474400 Sobic010G223400 Sobic010G223400 Sobic005G114500--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic005G114500--Sobic001G308400 Sobic003G005900 Sobic003G005900 Sobic005G114500--Sobic003G005900 Sobic005G059500 Sobic005G059500 Sobic005G114500--Sobic005G059500 Sobic005G110499 Sobic005G110499 Sobic005G114500--Sobic005G110499 Sobic009G122500 Sobic009G122500 Sobic005G114500--Sobic009G122500 Sobic001G097500--Sobic005G114500 Sobic001G097500--Sobic001G474400 Sobic009G003700 Sobic009G003700 Sobic001G097500--Sobic009G003700 Sobic003G314300 Sobic003G314300 Sobic001G097500--Sobic003G314300 Sobic003G182300 Sobic003G182300 Sobic001G097500--Sobic003G182300 Sobic001G012900 Sobic001G012900 Sobic001G097500--Sobic001G012900 Sobic001G097500--Sobic010G223400 Sobic006G203300 Sobic006G203300 Sobic001G097500--Sobic006G203300 Sobic001G193100 Sobic001G193100 Sobic001G097500--Sobic001G193100 Sobic004G155600 Sobic004G155600 Sobic006G270600--Sobic004G155600 Sobic003G132000 Sobic003G132000 Sobic006G270600--Sobic003G132000 Sobic001G259000 Sobic001G259000 Sobic006G270600--Sobic001G259000 Sobic010G264000 Sobic010G264000 Sobic006G270600--Sobic010G264000 Sobic002G295500 Sobic002G295500 Sobic006G270600--Sobic002G295500 Sobic009G131900 Sobic009G131900 Sobic006G270600--Sobic009G131900 Sobic006G014100 Sobic006G014100 Sobic006G270600--Sobic006G014100 Sobic001G492200 Sobic001G492200 Sobic006G270600--Sobic001G492200 Sobic001G114500 Sobic001G114500 Sobic006G270600--Sobic001G114500 Sobic003G308500 Sobic003G308500 Sobic006G002800--Sobic003G308500 Sobic004G224600 Sobic004G224600 Sobic006G002800--Sobic004G224600 Sobic002G150700 Sobic002G150700 Sobic006G002800--Sobic002G150700 Sobic001G145400 Sobic001G145400 Sobic006G002800--Sobic001G145400 Sobic003G146600 Sobic003G146600 Sobic006G002800--Sobic003G146600 Sobic010G007100 Sobic010G007100 Sobic006G002800--Sobic010G007100 Sobic004G321700 Sobic004G321700 Sobic006G002800--Sobic004G321700 Sobic009G234700 Sobic009G234700 Sobic006G002800--Sobic009G234700 Sobic008G147200 Sobic008G147200 Sobic006G002800--Sobic008G147200 Sobic003G230600--Sobic005G114500 Sobic001G125500 Sobic001G125500 Sobic003G230600--Sobic001G125500 Sobic009G128500 Sobic009G128500 Sobic003G230600--Sobic009G128500 Sobic003G230600--Sobic001G308400 Sobic007G145400 Sobic007G145400 Sobic003G230600--Sobic007G145400 Sobic008G092800 Sobic008G092800 Sobic003G230600--Sobic008G092800 Sobic003G143800 Sobic003G143800 Sobic003G230600--Sobic003G143800 Sobic002G363800 Sobic002G363800 Sobic003G230600--Sobic002G363800 Sobic003G230600--Sobic001G097500 Sobic004G017300--Sobic006G154100 Sobic001G393700 Sobic001G393700 Sobic004G017300--Sobic001G393700 Sobic001G369000 Sobic001G369000 Sobic004G017300--Sobic001G369000 Sobic004G017300--Sobic003G006400 Sobic002G111600 Sobic002G111600 Sobic004G017300--Sobic002G111600 Sobic004G017300--Sobic001G145400 Sobic006G166200 Sobic006G166200 Sobic004G017300--Sobic006G166200 Sobic008G124800 Sobic008G124800 Sobic004G017300--Sobic008G124800 Sobic001G335900 Sobic001G335900 Sobic004G017300--Sobic001G335900 Sobic006G208500 Sobic006G208500 Sobic003G006400--Sobic006G208500 Sobic006G200700 Sobic006G200700 Sobic003G006400--Sobic006G200700 Sobic002G275600 Sobic002G275600 Sobic003G006400--Sobic002G275600 Sobic003G006400--Sobic001G369000 Sobic006G138000 Sobic006G138000 Sobic003G006400--Sobic006G138000 Sobic010G151900 Sobic010G151900 Sobic003G006400--Sobic010G151900 Sobic003G006400--Sobic001G145400 Sobic006G077200 Sobic006G077200 Sobic003G006400--Sobic006G077200 Sobic003G006400--Sobic010G007100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.