Gene annotation
Transcriptome id Sobic.006G281700.1,Sobic.006G281700.2
Synonym Sb06g034190
Functional annotation DUF803 domain containing, putative, expressed
UniProt A0A1Z5RFZ6 , C5YB61
Pfam PF05653
Panther DB PTHR12570 PTHR12570:SF24
NCBI CDD KOG2922; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015693magnesium ion transport GO:0015095magnesium ion transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT1G71900 : Protein of unknown function (DUF803)
RAP-DB (Rice) LOC_Os01g65986.1 : DUF803 domain containing, putative, expressed
MaizeGDB (Corn) Zm00025a010579 , Zm00025a044212 , Zm00025a037360
Brachypodium KQJ89061 , KQJ85527
Barley HORVU2Hr1G127500.14 , HORVU1Hr1G077020.14 , HORVU1Hr1G077020.13 , HORVU1Hr1G077020.12 , HORVU1Hr1G077020.11 , HORVU1Hr1G077020.10 , HORVU2Hr1G127500.5 , HORVU2Hr1G127500.4 , HORVU2Hr1G127500.7 , HORVU2Hr1G127500.3 , HORVU1Hr1G077020.7 , HORVU1Hr1G077020.6 , HORVU1Hr1G077020.5 , HORVU1Hr1G077020.4 , HORVU1Hr1G077020.3 , HORVU1Hr1G077020.2 , HORVU1Hr1G077020.1 , HORVU2Hr1G127500.11 , HORVU1Hr1G077020.9 , HORVU1Hr1G077020.8
Wheat TraesCS2D02G567600 , TraesCS2A02G557600 , TraesCS2B02G617600
Populus PNS91162 , PNS91160 , PNS91161 , PNT07876 , PNT07874 , PNS91159 , PNS91158


JBrowse

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cDNA sequences
Sobic.006G281700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G063900 zinc ion binding protein, putative, expressed -
2 Sobic.002G260400 - -
3 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
4 Sobic.003G160000 SUMO protease, putative, expressed K08592: sentrin-specific protease 1
5 Sobic.009G260650 - -
6 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
7 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
8 Sobic.010G204400 phox domain-containing protein, putative, expressed -
9 Sobic.002G056701 - -
10 Sobic.009G137100 bZIP transcription factor domain containing protein, expressed -
11 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
12 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
13 Sobic.001G452000 heat shock protein DnaJ, putative, expressed K03686: molecular chaperone DnaJ
14 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
15 Sobic.003G416700 homeobox domain containing protein, expressed -
16 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
17 Sobic.004G309900 cold-induced protein, putative, expressed K13174: THO complex subunit 5
18 Sobic.010G245000 DTW domain containing protein, putative, expressed -
19 Sobic.001G308400 expressed protein -
20 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein


Gene co-expression network
sample Sobic006G281700 Sobic006G281700 Sobic002G063900 Sobic002G063900 Sobic006G281700--Sobic002G063900 Sobic002G260400 Sobic002G260400 Sobic006G281700--Sobic002G260400 Sobic004G246100 Sobic004G246100 Sobic006G281700--Sobic004G246100 Sobic003G160000 Sobic003G160000 Sobic006G281700--Sobic003G160000 Sobic009G260650 Sobic009G260650 Sobic006G281700--Sobic009G260650 Sobic001G042200 Sobic001G042200 Sobic006G281700--Sobic001G042200 Sobic007G218000 Sobic007G218000 Sobic006G281700--Sobic007G218000 Sobic010G204400 Sobic010G204400 Sobic006G281700--Sobic010G204400 Sobic002G056701 Sobic002G056701 Sobic006G281700--Sobic002G056701 Sobic008G173100 Sobic008G173100 Sobic002G063900--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic002G063900--Sobic006G116100 Sobic004G357100 Sobic004G357100 Sobic002G063900--Sobic004G357100 Sobic002G063900--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic002G063900--Sobic007G090430 Sobic002G063900--Sobic004G246100 Sobic002G278000 Sobic002G278000 Sobic002G063900--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic002G063900--Sobic008G149800 SobicK028600 SobicK028600 Sobic002G063900--SobicK028600 Sobic002G260400--Sobic008G173100 Sobic002G260400--Sobic002G056701 Sobic002G260400--Sobic002G063900 Sobic002G370900 Sobic002G370900 Sobic002G260400--Sobic002G370900 Sobic002G260400--Sobic006G116100 Sobic008G153000 Sobic008G153000 Sobic002G260400--Sobic008G153000 Sobic010G236400 Sobic010G236400 Sobic002G260400--Sobic010G236400 Sobic002G083500 Sobic002G083500 Sobic002G260400--Sobic002G083500 Sobic010G245000 Sobic010G245000 Sobic002G260400--Sobic010G245000 Sobic004G246100--Sobic008G149800 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic004G246100--Sobic002G063900 Sobic004G246100--Sobic008G173100 Sobic004G246100--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic004G246100--Sobic002G260400 Sobic003G160000--Sobic006G116100 Sobic003G160000--Sobic010G236400 Sobic003G241200 Sobic003G241200 Sobic003G160000--Sobic003G241200 Sobic003G160000--Sobic008G153000 Sobic003G160000--Sobic010G204400 Sobic007G026000 Sobic007G026000 Sobic003G160000--Sobic007G026000 Sobic004G084700 Sobic004G084700 Sobic003G160000--Sobic004G084700 Sobic001G452000 Sobic001G452000 Sobic003G160000--Sobic001G452000 Sobic006G032400 Sobic006G032400 Sobic003G160000--Sobic006G032400 Sobic009G260650--Sobic002G063900 Sobic009G260650--Sobic006G281700 Sobic003G297500 Sobic003G297500 Sobic009G260650--Sobic003G297500 Sobic001G308400 Sobic001G308400 Sobic009G260650--Sobic001G308400 Sobic009G260650--Sobic004G357100 Sobic009G228000 Sobic009G228000 Sobic009G260650--Sobic009G228000 Sobic007G147400 Sobic007G147400 Sobic009G260650--Sobic007G147400 Sobic004G122900 Sobic004G122900 Sobic009G260650--Sobic004G122900 Sobic009G129600 Sobic009G129600 Sobic009G260650--Sobic009G129600 Sobic010G077500 Sobic010G077500 Sobic001G042200--Sobic010G077500 Sobic004G345400 Sobic004G345400 Sobic001G042200--Sobic004G345400 Sobic007G187600 Sobic007G187600 Sobic001G042200--Sobic007G187600 Sobic008G058800 Sobic008G058800 Sobic001G042200--Sobic008G058800 Sobic007G056500 Sobic007G056500 Sobic001G042200--Sobic007G056500 Sobic003G212900 Sobic003G212900 Sobic001G042200--Sobic003G212900 Sobic007G042900 Sobic007G042900 Sobic001G042200--Sobic007G042900 Sobic009G249700 Sobic009G249700 Sobic001G042200--Sobic009G249700 Sobic001G042200--Sobic006G281700 Sobic007G132100 Sobic007G132100 Sobic007G218000--Sobic007G132100 Sobic004G072100 Sobic004G072100 Sobic007G218000--Sobic004G072100 Sobic002G112700 Sobic002G112700 Sobic007G218000--Sobic002G112700 Sobic006G131000 Sobic006G131000 Sobic007G218000--Sobic006G131000 Sobic009G044800 Sobic009G044800 Sobic007G218000--Sobic009G044800 Sobic007G218000--Sobic010G204400 Sobic006G012500 Sobic006G012500 Sobic007G218000--Sobic006G012500 Sobic007G218000--Sobic009G249700 Sobic009G092400 Sobic009G092400 Sobic007G218000--Sobic009G092400 Sobic006G163800 Sobic006G163800 Sobic010G204400--Sobic006G163800 Sobic006G195700 Sobic006G195700 Sobic010G204400--Sobic006G195700 Sobic010G204400--Sobic007G218000 Sobic010G204400--Sobic008G153000 Sobic010G204400--Sobic010G236400 Sobic010G204400--Sobic007G132100 Sobic003G416700 Sobic003G416700 Sobic010G204400--Sobic003G416700 Sobic010G204400--Sobic006G131000 Sobic010G116600 Sobic010G116600 Sobic010G204400--Sobic010G116600 Sobic002G056701--Sobic010G245000 Sobic002G056701--Sobic002G260400 Sobic002G056701--Sobic007G218000 Sobic002G056701--Sobic006G195700 Sobic002G056701--Sobic004G072100 Sobic002G056701--Sobic008G149800 Sobic002G056701--Sobic008G173100 Sobic001G515000 Sobic001G515000 Sobic002G056701--Sobic001G515000 Sobic010G053800 Sobic010G053800 Sobic002G056701--Sobic010G053800
Octagon: transcription factors


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