Gene annotation
Transcriptome id Sobic.003G160000.1
Synonym ESD4, Sb03g013930, ATESD4
Functional annotation SUMO protease, putative, expressed
UniProt C5XJX8
Pfam PF02902
Panther DB PTHR12606 PTHR12606:SF31
NCBI CDD KOG3246; Sentrin-specific cysteine protease (Ulp1 family)
KEGG Orthology K08592; sentrin-specific protease 1
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT4G15880 : Cysteine proteinases superfamily protein
RAP-DB (Rice) LOC_Os01g25370.1 : SUMO protease, putative, expressed
MaizeGDB (Corn) Zm00025a024508 , Zm00025a036251
Brachypodium KQK04269 , KQK04268
Barley HORVU3Hr1G043510.2 , HORVU3Hr1G043510.3 , HORVU3Hr1G043510.1 , HORVU3Hr1G043510.6 , HORVU3Hr1G043510.7 , HORVU3Hr1G043510.4 , HORVU3Hr1G043510.5
Wheat TraesCS3D02G196900 , TraesCS3A02G192700 , TraesCS3B02G223000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
2 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
3 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
4 Sobic.008G153000 MATH domain containing protein, expressed -
5 Sobic.010G204400 phox domain-containing protein, putative, expressed -
6 Sobic.007G026000 ATBET9, putative, expressed -
7 Sobic.004G084700 - -
8 Sobic.001G452000 heat shock protein DnaJ, putative, expressed K03686: molecular chaperone DnaJ
9 Sobic.006G032400 expressed protein -
10 Sobic.006G281700 DUF803 domain containing, putative, expressed -
11 Sobic.008G173100 actin, putative, expressed K11662: ACTR6, actin-related protein 6
12 Sobic.003G445400 vacuolar fusion protein MON1 homolog A, putative, expressed -
13 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
14 Sobic.006G186400 ZOS4-12 - C2H2 zinc finger protein, expressed -
15 Sobic.001G026200 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
16 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
17 Sobic.002G260400 - -
18 Sobic.010G245000 DTW domain containing protein, putative, expressed -
19 Sobic.002G264200 RNA recognition motif containing protein, expressed -
20 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7


Gene co-expression network
sample Sobic003G160000 Sobic003G160000 Sobic006G116100 Sobic006G116100 Sobic003G160000--Sobic006G116100 Sobic010G236400 Sobic010G236400 Sobic003G160000--Sobic010G236400 Sobic003G241200 Sobic003G241200 Sobic003G160000--Sobic003G241200 Sobic008G153000 Sobic008G153000 Sobic003G160000--Sobic008G153000 Sobic010G204400 Sobic010G204400 Sobic003G160000--Sobic010G204400 Sobic007G026000 Sobic007G026000 Sobic003G160000--Sobic007G026000 Sobic004G084700 Sobic004G084700 Sobic003G160000--Sobic004G084700 Sobic001G452000 Sobic001G452000 Sobic003G160000--Sobic001G452000 Sobic006G032400 Sobic006G032400 Sobic003G160000--Sobic006G032400 Sobic006G116100--Sobic008G153000 Sobic008G149800 Sobic008G149800 Sobic006G116100--Sobic008G149800 Sobic008G173100 Sobic008G173100 Sobic006G116100--Sobic008G173100 Sobic006G116100--Sobic003G160000 Sobic002G063900 Sobic002G063900 Sobic006G116100--Sobic002G063900 Sobic002G357700 Sobic002G357700 Sobic006G116100--Sobic002G357700 Sobic006G116100--Sobic003G241200 Sobic009G119000 Sobic009G119000 Sobic006G116100--Sobic009G119000 Sobic003G416700 Sobic003G416700 Sobic006G116100--Sobic003G416700 Sobic004G084300 Sobic004G084300 Sobic010G236400--Sobic004G084300 Sobic002G264200 Sobic002G264200 Sobic010G236400--Sobic002G264200 Sobic010G069100 Sobic010G069100 Sobic010G236400--Sobic010G069100 Sobic002G126500 Sobic002G126500 Sobic010G236400--Sobic002G126500 Sobic004G274200 Sobic004G274200 Sobic010G236400--Sobic004G274200 Sobic010G116600 Sobic010G116600 Sobic010G236400--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic010G236400--Sobic007G183900 Sobic002G071500 Sobic002G071500 Sobic010G236400--Sobic002G071500 Sobic003G401100 Sobic003G401100 Sobic010G236400--Sobic003G401100 Sobic003G241200--Sobic004G084300 Sobic006G165000 Sobic006G165000 Sobic003G241200--Sobic006G165000 Sobic003G241200--Sobic006G032400 Sobic002G248400 Sobic002G248400 Sobic003G241200--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic003G241200--Sobic002G320500 Sobic003G173950 Sobic003G173950 Sobic003G241200--Sobic003G173950 Sobic003G241200--Sobic010G236400 Sobic003G200200 Sobic003G200200 Sobic003G241200--Sobic003G200200 Sobic002G157000 Sobic002G157000 Sobic003G241200--Sobic002G157000 Sobic008G153000--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic008G153000--Sobic006G046700 Sobic008G153000--Sobic008G149800 Sobic008G153000--Sobic002G264200 Sobic001G155000 Sobic001G155000 Sobic008G153000--Sobic001G155000 Sobic003G445400 Sobic003G445400 Sobic008G153000--Sobic003G445400 Sobic003G059750 Sobic003G059750 Sobic008G153000--Sobic003G059750 Sobic008G153000--Sobic007G026000 Sobic008G153000--Sobic010G069100 Sobic006G163800 Sobic006G163800 Sobic010G204400--Sobic006G163800 Sobic006G195700 Sobic006G195700 Sobic010G204400--Sobic006G195700 Sobic007G218000 Sobic007G218000 Sobic010G204400--Sobic007G218000 Sobic010G204400--Sobic008G153000 Sobic010G204400--Sobic010G236400 Sobic007G132100 Sobic007G132100 Sobic010G204400--Sobic007G132100 Sobic010G204400--Sobic003G416700 Sobic006G131000 Sobic006G131000 Sobic010G204400--Sobic006G131000 Sobic010G204400--Sobic010G116600 Sobic007G026000--Sobic008G153000 Sobic007G026000--Sobic006G046700 Sobic005G059100 Sobic005G059100 Sobic007G026000--Sobic005G059100 Sobic007G026000--Sobic003G445400 Sobic007G026000--Sobic009G119000 Sobic002G153700 Sobic002G153700 Sobic007G026000--Sobic002G153700 Sobic001G206100 Sobic001G206100 Sobic007G026000--Sobic001G206100 Sobic006G013500 Sobic006G013500 Sobic007G026000--Sobic006G013500 Sobic004G031700 Sobic004G031700 Sobic007G026000--Sobic004G031700 Sobic004G084700--Sobic001G452000 Sobic004G084700--Sobic010G236400 Sobic004G084700--Sobic003G059750 Sobic004G084700--Sobic007G218000 Sobic002G112700 Sobic002G112700 Sobic004G084700--Sobic002G112700 Sobic005G118600 Sobic005G118600 Sobic004G084700--Sobic005G118600 Sobic004G084700--Sobic008G153000 Sobic008G047800 Sobic008G047800 Sobic004G084700--Sobic008G047800 Sobic009G040600 Sobic009G040600 Sobic004G084700--Sobic009G040600 Sobic001G452000--Sobic004G084700 Sobic001G452000--Sobic005G118600 Sobic001G441400 Sobic001G441400 Sobic001G452000--Sobic001G441400 Sobic001G452000--Sobic010G236400 Sobic001G452000--Sobic003G445400 Sobic004G067700 Sobic004G067700 Sobic001G452000--Sobic004G067700 Sobic001G091400 Sobic001G091400 Sobic001G452000--Sobic001G091400 Sobic008G084700 Sobic008G084700 Sobic001G452000--Sobic008G084700 Sobic002G260400 Sobic002G260400 Sobic001G452000--Sobic002G260400 Sobic006G032400--Sobic002G320500 Sobic006G032400--Sobic002G248400 Sobic005G015900 Sobic005G015900 Sobic006G032400--Sobic005G015900 Sobic006G032400--Sobic003G241200 Sobic009G210500 Sobic009G210500 Sobic006G032400--Sobic009G210500 Sobic001G090400 Sobic001G090400 Sobic006G032400--Sobic001G090400 Sobic006G173100 Sobic006G173100 Sobic006G032400--Sobic006G173100 Sobic004G271000 Sobic004G271000 Sobic006G032400--Sobic004G271000 Sobic001G094000 Sobic001G094000 Sobic006G032400--Sobic001G094000
Octagon: transcription factors


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