Gene annotation
Transcriptome id Sobic.001G034500.1
Synonym Sb01g003230
Functional annotation SEC14 cytosolic factor family protein, putative, expressed
UniProt C5WV14
Pfam PF00650
Panther DB PTHR10174 PTHR10174:SF100
NCBI CDD KOG1471; Phosphatidylinositol transfer protein SEC14 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46450 : SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
RAP-DB (Rice) LOC_Os03g60610.1 : SEC14 cytosolic factor family protein, putative, expressed
MaizeGDB (Corn) Zm00025a016430 , Zm00025a008808 , Zm00025a017969 , Zm00025a034582
Brachypodium KQK12435
Barley HORVU5Hr1G112990.1 , HORVU5Hr1G112990.3 , HORVU5Hr1G112990.2
Wheat TraesCS5B02G492000 , TraesCS5D02G492600 , TraesCS5A02G479100 , TraesCS5A02G479100
Populus -


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cDNA sequences
Sobic.001G034500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G477700 WD domain, G-beta repeat domain containing protein, expressed K11807: WDTC1, WD and tetratricopeptide repeats protein 1
2 Sobic.003G284000 CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
3 Sobic.006G154100 mRNA cap guanine-N7 methyltransferase 2, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
4 Sobic.001G004100 WD domain, G-beta repeat domain containing protein, expressed -
5 Sobic.001G135500 HECT-domain domain containing protein, expressed K10588: ubiquitin-protein ligase E3 B
6 Sobic.001G413800 expressed protein K13141: integrator complex subunit 4
7 Sobic.003G212900 zinc ion binding protein, putative, expressed -
8 Sobic.001G097500 expressed protein -
9 Sobic.007G042900 BSD domain-containing protein, putative, expressed K03141: TFIIH1, GTF2H1, transcription initiation factor TFIIH subunit 1
10 Sobic.003G230600 transcription factor X1, putative, expressed -
11 Sobic.002G127200 CRAL/TRIO domain containing protein, expressed -
12 Sobic.006G224800 expressed protein -
13 Sobic.003G227100 adaptin, putative, expressed -
14 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
15 Sobic.001G088900 serine/threonine-protein kinase TOUSLED, putative, expressed K08864: tousled-like kinase
16 Sobic.003G314300 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.002G295500 expressed protein -
18 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
19 Sobic.002G142700 PPR repeat containing protein, putative, expressed -
20 Sobic.006G239400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11366: USP22_27_51, ubiquitin carboxyl-terminal hydrolase 22/27/51


Gene co-expression network
sample Sobic001G034500 Sobic001G034500 Sobic001G477700 Sobic001G477700 Sobic001G034500--Sobic001G477700 Sobic003G284000 Sobic003G284000 Sobic001G034500--Sobic003G284000 Sobic006G154100 Sobic006G154100 Sobic001G034500--Sobic006G154100 Sobic001G004100 Sobic001G004100 Sobic001G034500--Sobic001G004100 Sobic001G135500 Sobic001G135500 Sobic001G034500--Sobic001G135500 Sobic001G413800 Sobic001G413800 Sobic001G034500--Sobic001G413800 Sobic003G212900 Sobic003G212900 Sobic001G034500--Sobic003G212900 Sobic001G097500 Sobic001G097500 Sobic001G034500--Sobic001G097500 Sobic007G042900 Sobic007G042900 Sobic001G034500--Sobic007G042900 Sobic006G131000 Sobic006G131000 Sobic001G477700--Sobic006G131000 Sobic001G096000 Sobic001G096000 Sobic001G477700--Sobic001G096000 Sobic001G477700--Sobic007G042900 Sobic001G477700--Sobic001G034500 Sobic007G196900 Sobic007G196900 Sobic001G477700--Sobic007G196900 Sobic007G180600 Sobic007G180600 Sobic001G477700--Sobic007G180600 Sobic001G477700--Sobic001G413800 Sobic001G477700--Sobic003G284000 Sobic010G204400 Sobic010G204400 Sobic001G477700--Sobic010G204400 Sobic003G050900 Sobic003G050900 Sobic003G284000--Sobic003G050900 Sobic009G208100 Sobic009G208100 Sobic003G284000--Sobic009G208100 Sobic003G284000--Sobic007G042900 Sobic003G284000--Sobic001G034500 Sobic009G077600 Sobic009G077600 Sobic003G284000--Sobic009G077600 Sobic003G209200 Sobic003G209200 Sobic003G284000--Sobic003G209200 Sobic009G003700 Sobic009G003700 Sobic003G284000--Sobic009G003700 Sobic006G174850 Sobic006G174850 Sobic003G284000--Sobic006G174850 Sobic004G147500 Sobic004G147500 Sobic003G284000--Sobic004G147500 Sobic002G127200 Sobic002G127200 Sobic006G154100--Sobic002G127200 Sobic006G154100--Sobic001G034500 Sobic005G114500 Sobic005G114500 Sobic006G154100--Sobic005G114500 Sobic006G154100--Sobic001G097500 Sobic006G270600 Sobic006G270600 Sobic006G154100--Sobic006G270600 Sobic006G002800 Sobic006G002800 Sobic006G154100--Sobic006G002800 Sobic003G230600 Sobic003G230600 Sobic006G154100--Sobic003G230600 Sobic004G017300 Sobic004G017300 Sobic006G154100--Sobic004G017300 Sobic003G006400 Sobic003G006400 Sobic006G154100--Sobic003G006400 Sobic004G031300 Sobic004G031300 Sobic001G004100--Sobic004G031300 Sobic007G187600 Sobic007G187600 Sobic001G004100--Sobic007G187600 Sobic001G013300 Sobic001G013300 Sobic001G004100--Sobic001G013300 Sobic009G113100 Sobic009G113100 Sobic001G004100--Sobic009G113100 Sobic009G255600 Sobic009G255600 Sobic001G004100--Sobic009G255600 Sobic001G408600 Sobic001G408600 Sobic001G004100--Sobic001G408600 Sobic001G373000 Sobic001G373000 Sobic001G004100--Sobic001G373000 Sobic002G142700 Sobic002G142700 Sobic001G004100--Sobic002G142700 Sobic001G004100--Sobic001G034500 Sobic001G135500--Sobic003G212900 Sobic010G077500 Sobic010G077500 Sobic001G135500--Sobic010G077500 Sobic002G245000 Sobic002G245000 Sobic001G135500--Sobic002G245000 Sobic001G135500--Sobic007G187600 Sobic002G390400 Sobic002G390400 Sobic001G135500--Sobic002G390400 Sobic008G021000 Sobic008G021000 Sobic001G135500--Sobic008G021000 Sobic009G045200 Sobic009G045200 Sobic001G135500--Sobic009G045200 Sobic001G005600 Sobic001G005600 Sobic001G135500--Sobic001G005600 Sobic001G135500--Sobic001G034500 Sobic001G413800--Sobic001G477700 Sobic006G180700 Sobic006G180700 Sobic001G413800--Sobic006G180700 Sobic001G413800--Sobic001G034500 Sobic001G413800--Sobic006G154100 Sobic006G281700 Sobic006G281700 Sobic001G413800--Sobic006G281700 Sobic001G413800--Sobic007G042900 Sobic001G413800--Sobic010G204400 Sobic004G068500 Sobic004G068500 Sobic001G413800--Sobic004G068500 Sobic002G363000 Sobic002G363000 Sobic001G413800--Sobic002G363000 Sobic003G212900--Sobic001G135500 Sobic003G212900--Sobic010G077500 Sobic002G422100 Sobic002G422100 Sobic003G212900--Sobic002G422100 Sobic003G416700 Sobic003G416700 Sobic003G212900--Sobic003G416700 Sobic001G042200 Sobic001G042200 Sobic003G212900--Sobic001G042200 Sobic004G309900 Sobic004G309900 Sobic003G212900--Sobic004G309900 Sobic006G224800 Sobic006G224800 Sobic003G212900--Sobic006G224800 Sobic008G058800 Sobic008G058800 Sobic003G212900--Sobic008G058800 Sobic002G295500 Sobic002G295500 Sobic003G212900--Sobic002G295500 Sobic001G097500--Sobic005G114500 Sobic001G474400 Sobic001G474400 Sobic001G097500--Sobic001G474400 Sobic001G097500--Sobic009G003700 Sobic003G314300 Sobic003G314300 Sobic001G097500--Sobic003G314300 Sobic003G182300 Sobic003G182300 Sobic001G097500--Sobic003G182300 Sobic001G012900 Sobic001G012900 Sobic001G097500--Sobic001G012900 Sobic010G223400 Sobic010G223400 Sobic001G097500--Sobic010G223400 Sobic006G203300 Sobic006G203300 Sobic001G097500--Sobic006G203300 Sobic001G193100 Sobic001G193100 Sobic001G097500--Sobic001G193100 Sobic004G345400 Sobic004G345400 Sobic007G042900--Sobic004G345400 Sobic009G249700 Sobic009G249700 Sobic007G042900--Sobic009G249700 Sobic007G042900--Sobic001G042200 Sobic005G110499 Sobic005G110499 Sobic007G042900--Sobic005G110499 Sobic010G169900 Sobic010G169900 Sobic007G042900--Sobic010G169900 Sobic007G042900--Sobic003G182300 Sobic003G394200 Sobic003G394200 Sobic007G042900--Sobic003G394200 Sobic006G139100 Sobic006G139100 Sobic007G042900--Sobic006G139100 Sobic007G042900--Sobic001G005600
Octagon: transcription factors


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