Gene annotation
Transcriptome id Sobic.001G088900.1
Synonym Sb01g008020, TSL
Functional annotation serine/threonine-protein kinase TOUSLED, putative, expressed
UniProt C5X142
Pfam PF00069
Panther DB PTHR22974 PTHR22974:SF23
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K08864; tousled-like kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G20930 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g53880.1 : serine/threonine-protein kinase TOUSLED, putative, expressed
MaizeGDB (Corn) Zm00025a008149 , Zm00025a016795 , Zm00025a008157
Brachypodium KQK13198 , KQK13197
Barley HORVU5Hr1G095200.3 , HORVU5Hr1G095200.2 , HORVU5Hr1G095200.1 , HORVU5Hr1G095200.7 , HORVU5Hr1G095200.6 , HORVU5Hr1G095200.5 , HORVU5Hr1G095200.4 , HORVU5Hr1G095200.9 , HORVU5Hr1G095200.8 , HORVU5Hr1G095200.12 , HORVU5Hr1G095200.11 , HORVU5Hr1G095200.10
Wheat TraesCS5A02G389200 , TraesCS5A02G389200 , TraesCS5D02G399200 , TraesCS5B02G394400 , TraesCS5B02G394400 , TraesCS5B02G394400
Populus -


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cDNA sequences
Sobic.001G088900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G279900 PHD-finger domain containing protein, expressed -
2 Sobic.001G245900 expressed protein -
3 Sobic.001G367100 pleckstrin homology domain-containing protein, putative, expressed -
4 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
5 Sobic.009G000400 expressed protein -
6 Sobic.001G034500 SEC14 cytosolic factor family protein, putative, expressed -
7 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
8 Sobic.001G222000 WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.001G261585 - -
10 Sobic.004G149800 transcriptional derepression of gliadins and low-molecular-weight glutenins (LMWgs) by active demethylation of their promoters(PubMedID : 23184965)@hhH-GPD superfamily base excision DNA repair protein, expressed -
11 Sobic.006G138000 expressed protein -
12 Sobic.001G384000 expressed protein -
13 Sobic.003G074200 actin, putative, expressed K11672: ACTR5, ARP5, actin-related protein 5
14 Sobic.002G039200 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
15 Sobic.006G207300 DNA ligase I, ATP-dependent family protein, expressed K10777: LIG4, DNA ligase 4
16 Sobic.001G477700 WD domain, G-beta repeat domain containing protein, expressed K11807: WDTC1, WD and tetratricopeptide repeats protein 1
17 Sobic.004G312100 HYS1, putative, expressed -
18 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
19 Sobic.002G288000 bromodomain domain containing protein, expressed K11723: bromodomain-containing protein 7
20 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -


Gene co-expression network
sample Sobic001G088900 Sobic001G088900 Sobic010G279900 Sobic010G279900 Sobic001G088900--Sobic010G279900 Sobic001G245900 Sobic001G245900 Sobic001G088900--Sobic001G245900 Sobic001G367100 Sobic001G367100 Sobic001G088900--Sobic001G367100 Sobic006G180700 Sobic006G180700 Sobic001G088900--Sobic006G180700 Sobic009G000400 Sobic009G000400 Sobic001G088900--Sobic009G000400 Sobic001G034500 Sobic001G034500 Sobic001G088900--Sobic001G034500 Sobic010G269300 Sobic010G269300 Sobic001G088900--Sobic010G269300 Sobic001G222000 Sobic001G222000 Sobic001G088900--Sobic001G222000 Sobic001G261585 Sobic001G261585 Sobic001G088900--Sobic001G261585 Sobic004G156500 Sobic004G156500 Sobic010G279900--Sobic004G156500 Sobic007G183300 Sobic007G183300 Sobic010G279900--Sobic007G183300 Sobic004G086200 Sobic004G086200 Sobic010G279900--Sobic004G086200 Sobic010G279900--Sobic001G367100 Sobic007G027700 Sobic007G027700 Sobic010G279900--Sobic007G027700 Sobic003G409200 Sobic003G409200 Sobic010G279900--Sobic003G409200 Sobic003G253400 Sobic003G253400 Sobic010G279900--Sobic003G253400 Sobic003G416700 Sobic003G416700 Sobic010G279900--Sobic003G416700 Sobic008G100100 Sobic008G100100 Sobic010G279900--Sobic008G100100 Sobic001G245900--Sobic004G086200 Sobic001G245900--Sobic001G367100 Sobic001G245900--Sobic010G279900 Sobic001G346900 Sobic001G346900 Sobic001G245900--Sobic001G346900 Sobic008G057000 Sobic008G057000 Sobic001G245900--Sobic008G057000 Sobic001G245900--Sobic003G409200 Sobic001G134300 Sobic001G134300 Sobic001G245900--Sobic001G134300 Sobic001G245900--Sobic001G088900 Sobic006G138000 Sobic006G138000 Sobic001G245900--Sobic006G138000 Sobic001G367100--Sobic010G279900 Sobic001G315400 Sobic001G315400 Sobic001G367100--Sobic001G315400 Sobic001G367100--Sobic001G245900 Sobic003G023400 Sobic003G023400 Sobic001G367100--Sobic003G023400 Sobic008G080500 Sobic008G080500 Sobic001G367100--Sobic008G080500 Sobic009G151200 Sobic009G151200 Sobic001G367100--Sobic009G151200 Sobic004G128200 Sobic004G128200 Sobic001G367100--Sobic004G128200 Sobic002G079100 Sobic002G079100 Sobic001G367100--Sobic002G079100 Sobic003G077500 Sobic003G077500 Sobic001G367100--Sobic003G077500 Sobic009G074700 Sobic009G074700 Sobic006G180700--Sobic009G074700 Sobic001G085700 Sobic001G085700 Sobic006G180700--Sobic001G085700 Sobic006G180700--Sobic006G138000 Sobic009G040800 Sobic009G040800 Sobic006G180700--Sobic009G040800 Sobic006G180700--Sobic009G000400 Sobic001G335900 Sobic001G335900 Sobic006G180700--Sobic001G335900 Sobic009G045200 Sobic009G045200 Sobic006G180700--Sobic009G045200 Sobic006G091000 Sobic006G091000 Sobic006G180700--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic006G180700--Sobic005G040900 Sobic009G000400--Sobic009G074700 Sobic006G028700 Sobic006G028700 Sobic009G000400--Sobic006G028700 Sobic009G000400--Sobic009G040800 Sobic009G000400--Sobic006G180700 Sobic002G115500 Sobic002G115500 Sobic009G000400--Sobic002G115500 Sobic007G026000 Sobic007G026000 Sobic009G000400--Sobic007G026000 Sobic009G000400--Sobic005G040900 Sobic009G000400--Sobic010G279900 Sobic009G000400--Sobic001G085700 Sobic001G477700 Sobic001G477700 Sobic001G034500--Sobic001G477700 Sobic003G284000 Sobic003G284000 Sobic001G034500--Sobic003G284000 Sobic006G154100 Sobic006G154100 Sobic001G034500--Sobic006G154100 Sobic001G004100 Sobic001G004100 Sobic001G034500--Sobic001G004100 Sobic001G135500 Sobic001G135500 Sobic001G034500--Sobic001G135500 Sobic001G413800 Sobic001G413800 Sobic001G034500--Sobic001G413800 Sobic003G212900 Sobic003G212900 Sobic001G034500--Sobic003G212900 Sobic001G097500 Sobic001G097500 Sobic001G034500--Sobic001G097500 Sobic007G042900 Sobic007G042900 Sobic001G034500--Sobic007G042900 Sobic007G125700 Sobic007G125700 Sobic010G269300--Sobic007G125700 Sobic002G430900 Sobic002G430900 Sobic010G269300--Sobic002G430900 Sobic002G263700 Sobic002G263700 Sobic010G269300--Sobic002G263700 Sobic001G123600 Sobic001G123600 Sobic010G269300--Sobic001G123600 Sobic003G360300 Sobic003G360300 Sobic010G269300--Sobic003G360300 Sobic010G269300--Sobic008G080500 Sobic010G236200 Sobic010G236200 Sobic010G269300--Sobic010G236200 Sobic010G269300--Sobic010G279900 Sobic009G032200 Sobic009G032200 Sobic010G269300--Sobic009G032200 Sobic001G373000 Sobic001G373000 Sobic001G222000--Sobic001G373000 Sobic001G222000--Sobic001G135500 Sobic001G023800 Sobic001G023800 Sobic001G222000--Sobic001G023800 Sobic001G393700 Sobic001G393700 Sobic001G222000--Sobic001G393700 Sobic007G168300 Sobic007G168300 Sobic001G222000--Sobic007G168300 Sobic001G222000--Sobic008G057000 Sobic003G074200 Sobic003G074200 Sobic001G222000--Sobic003G074200 Sobic001G355200 Sobic001G355200 Sobic001G222000--Sobic001G355200 Sobic001G222000--Sobic009G032200 Sobic001G261585--Sobic001G088900 Sobic009G253400 Sobic009G253400 Sobic001G261585--Sobic009G253400 Sobic003G420000 Sobic003G420000 Sobic001G261585--Sobic003G420000 Sobic001G261585--Sobic001G367100 Sobic009G235200 Sobic009G235200 Sobic001G261585--Sobic009G235200 Sobic006G059500 Sobic006G059500 Sobic001G261585--Sobic006G059500 Sobic005G168300 Sobic005G168300 Sobic001G261585--Sobic005G168300 Sobic007G030000 Sobic007G030000 Sobic001G261585--Sobic007G030000 Sobic001G187800 Sobic001G187800 Sobic001G261585--Sobic001G187800
Octagon: transcription factors


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