Gene annotation
Transcriptome id Sobic.001G245900.1
Synonym Sb01g021760
Functional annotation expressed protein
UniProt C5X1I7
Pfam PF15365
Panther DB PTHR35306
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02715 : -
RAP-DB (Rice) LOC_Os10g28710.1 : expressed protein
MaizeGDB (Corn) Zm00025a006908
Brachypodium KQJ96776 , KQJ96775
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G245900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
2 Sobic.001G367100 pleckstrin homology domain-containing protein, putative, expressed -
3 Sobic.010G279900 PHD-finger domain containing protein, expressed -
4 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
5 Sobic.008G057000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
6 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
7 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
8 Sobic.001G088900 serine/threonine-protein kinase TOUSLED, putative, expressed K08864: tousled-like kinase
9 Sobic.006G138000 expressed protein -
10 Sobic.009G000400 expressed protein -
11 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
12 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
13 Sobic.001G261521 - -
14 Sobic.002G422100 EMB1011, putative, expressed K14317: NUP214, nuclear pore complex protein Nup214
15 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
16 Sobic.007G168300 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed -
17 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
18 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
19 Sobic.001G018100 "qTGW3/GL3.3/TGW3(Ortholog in rice:Hu et al., 2018/Xia et al., 2018/Ying et al., 2018 )"(PubMedID : 31659830)@CGMC_GSK.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
20 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G245900 Sobic001G245900 Sobic004G086200 Sobic004G086200 Sobic001G245900--Sobic004G086200 Sobic001G367100 Sobic001G367100 Sobic001G245900--Sobic001G367100 Sobic010G279900 Sobic010G279900 Sobic001G245900--Sobic010G279900 Sobic001G346900 Sobic001G346900 Sobic001G245900--Sobic001G346900 Sobic008G057000 Sobic008G057000 Sobic001G245900--Sobic008G057000 Sobic003G409200 Sobic003G409200 Sobic001G245900--Sobic003G409200 Sobic001G134300 Sobic001G134300 Sobic001G245900--Sobic001G134300 Sobic001G088900 Sobic001G088900 Sobic001G245900--Sobic001G088900 Sobic006G138000 Sobic006G138000 Sobic001G245900--Sobic006G138000 Sobic004G086200--Sobic001G346900 Sobic004G285000 Sobic004G285000 Sobic004G086200--Sobic004G285000 Sobic004G086200--Sobic001G134300 Sobic004G086200--Sobic001G245900 Sobic001G306900 Sobic001G306900 Sobic004G086200--Sobic001G306900 Sobic010G096000 Sobic010G096000 Sobic004G086200--Sobic010G096000 Sobic004G086200--Sobic010G279900 Sobic001G246500 Sobic001G246500 Sobic004G086200--Sobic001G246500 Sobic010G065300 Sobic010G065300 Sobic004G086200--Sobic010G065300 Sobic001G367100--Sobic010G279900 Sobic001G315400 Sobic001G315400 Sobic001G367100--Sobic001G315400 Sobic001G367100--Sobic001G245900 Sobic003G023400 Sobic003G023400 Sobic001G367100--Sobic003G023400 Sobic008G080500 Sobic008G080500 Sobic001G367100--Sobic008G080500 Sobic009G151200 Sobic009G151200 Sobic001G367100--Sobic009G151200 Sobic004G128200 Sobic004G128200 Sobic001G367100--Sobic004G128200 Sobic002G079100 Sobic002G079100 Sobic001G367100--Sobic002G079100 Sobic003G077500 Sobic003G077500 Sobic001G367100--Sobic003G077500 Sobic004G156500 Sobic004G156500 Sobic010G279900--Sobic004G156500 Sobic007G183300 Sobic007G183300 Sobic010G279900--Sobic007G183300 Sobic010G279900--Sobic004G086200 Sobic010G279900--Sobic001G367100 Sobic007G027700 Sobic007G027700 Sobic010G279900--Sobic007G027700 Sobic010G279900--Sobic003G409200 Sobic003G253400 Sobic003G253400 Sobic010G279900--Sobic003G253400 Sobic003G416700 Sobic003G416700 Sobic010G279900--Sobic003G416700 Sobic008G100100 Sobic008G100100 Sobic010G279900--Sobic008G100100 Sobic001G346900--Sobic004G086200 Sobic001G346900--Sobic003G409200 Sobic001G346900--Sobic001G134300 Sobic003G042400 Sobic003G042400 Sobic001G346900--Sobic003G042400 Sobic008G147200 Sobic008G147200 Sobic001G346900--Sobic008G147200 Sobic001G346900--Sobic004G285000 Sobic001G346900--Sobic003G416700 Sobic001G346900--Sobic010G096000 Sobic002G422100 Sobic002G422100 Sobic001G346900--Sobic002G422100 Sobic008G057000--Sobic003G409200 Sobic005G200800 Sobic005G200800 Sobic008G057000--Sobic005G200800 Sobic008G057000--Sobic001G346900 Sobic008G057000--Sobic004G086200 Sobic002G148400 Sobic002G148400 Sobic008G057000--Sobic002G148400 Sobic008G057000--Sobic010G279900 Sobic001G484200 Sobic001G484200 Sobic008G057000--Sobic001G484200 Sobic009G032200 Sobic009G032200 Sobic008G057000--Sobic009G032200 Sobic008G057000--Sobic007G183300 Sobic003G409200--Sobic001G346900 Sobic010G215900 Sobic010G215900 Sobic003G409200--Sobic010G215900 Sobic004G111000 Sobic004G111000 Sobic003G409200--Sobic004G111000 Sobic003G409200--Sobic008G057000 Sobic003G427100 Sobic003G427100 Sobic003G409200--Sobic003G427100 Sobic001G501800 Sobic001G501800 Sobic003G409200--Sobic001G501800 Sobic003G409200--Sobic004G285000 Sobic003G409200--Sobic010G279900 Sobic002G145800 Sobic002G145800 Sobic003G409200--Sobic002G145800 Sobic001G134300--Sobic010G065300 Sobic001G134300--Sobic001G306900 Sobic010G001100 Sobic010G001100 Sobic001G134300--Sobic010G001100 Sobic001G134300--Sobic004G156500 Sobic001G134300--Sobic004G086200 Sobic001G398800 Sobic001G398800 Sobic001G134300--Sobic001G398800 Sobic001G090800 Sobic001G090800 Sobic001G134300--Sobic001G090800 Sobic001G134300--Sobic001G346900 Sobic002G153700 Sobic002G153700 Sobic001G134300--Sobic002G153700 Sobic001G088900--Sobic010G279900 Sobic001G088900--Sobic001G245900 Sobic001G088900--Sobic001G367100 Sobic006G180700 Sobic006G180700 Sobic001G088900--Sobic006G180700 Sobic009G000400 Sobic009G000400 Sobic001G088900--Sobic009G000400 Sobic001G034500 Sobic001G034500 Sobic001G088900--Sobic001G034500 Sobic010G269300 Sobic010G269300 Sobic001G088900--Sobic010G269300 Sobic001G222000 Sobic001G222000 Sobic001G088900--Sobic001G222000 Sobic001G261585 Sobic001G261585 Sobic001G088900--Sobic001G261585 Sobic001G170100 Sobic001G170100 Sobic006G138000--Sobic001G170100 Sobic001G518400 Sobic001G518400 Sobic006G138000--Sobic001G518400 Sobic001G335900 Sobic001G335900 Sobic006G138000--Sobic001G335900 Sobic001G369000 Sobic001G369000 Sobic006G138000--Sobic001G369000 Sobic010G275500 Sobic010G275500 Sobic006G138000--Sobic010G275500 Sobic003G240700 Sobic003G240700 Sobic006G138000--Sobic003G240700 Sobic003G187500 Sobic003G187500 Sobic006G138000--Sobic003G187500 Sobic001G426600 Sobic001G426600 Sobic006G138000--Sobic001G426600 Sobic010G053800 Sobic010G053800 Sobic006G138000--Sobic010G053800
Octagon: transcription factors


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