Gene annotation
Transcriptome id Sobic.004G312100.1,Sobic.004G312100.2
Synonym Sb04g034430, HYS1, CPR5
Functional annotation HYS1, putative, expressed
UniProt C5XSX9 , A0A194YSL2
Pfam -
Panther DB PTHR35322 PTHR35322:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64930 : CPR5 protein, putative
RAP-DB (Rice) LOC_Os02g53070.1 : HYS1, putative, expressed
MaizeGDB (Corn) Zm00025a033075
Brachypodium KQK01709 , KQK01676 , KQK01710
Barley HORVU6Hr1G079790.8 , HORVU6Hr1G079790.9 , HORVU6Hr1G079790.4 , HORVU6Hr1G079790.5 , HORVU6Hr1G079790.6 , HORVU6Hr1G079790.7 , HORVU6Hr1G079790.1 , HORVU6Hr1G079790.2 , HORVU6Hr1G079790.3 , HORVU6Hr1G079790.16 , HORVU6Hr1G079790.17 , HORVU6Hr1G079790.14 , HORVU6Hr1G079790.15 , HORVU6Hr1G079790.12 , HORVU6Hr1G079790.13 , HORVU6Hr1G079790.10 , HORVU6Hr1G079790.11
Wheat TraesCS6B02G358000 , TraesCS6B02G358000 , TraesCS6B02G358000 , TraesCS6D02G306700 , TraesCS6A02G326900
Populus -


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cDNA sequences
Sobic.004G312100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
2 Sobic.001G088900 serine/threonine-protein kinase TOUSLED, putative, expressed K08864: tousled-like kinase
3 Sobic.001G334100 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed K01814: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
4 Sobic.003G360300 exostosin family domain containing protein, expressed -
5 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
6 Sobic.001G034500 SEC14 cytosolic factor family protein, putative, expressed -
7 Sobic.006G268300 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed K03434: N-acetylglucosaminylphosphatidylinositol deacetylase
8 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
9 Sobic.001G413800 expressed protein K13141: integrator complex subunit 4
10 Sobic.005G040900 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
11 Sobic.008G000600 RNase P subunit p30, putative, expressed K03539: RPP1, ribonuclease P/MRP protein subunit RPP1
12 Sobic.001G477700 WD domain, G-beta repeat domain containing protein, expressed K11807: WDTC1, WD and tetratricopeptide repeats protein 1
13 Sobic.002G182000 cwfJ-like family protein, putative, expressed -
14 Sobic.001G007800 WD domain, G-beta repeat domain containing protein, expressed K11806: DCAF13, DDB1- and CUL4-associated factor 13
15 Sobic.007G042900 BSD domain-containing protein, putative, expressed K03141: TFIIH1, GTF2H1, transcription initiation factor TFIIH subunit 1
16 Sobic.008G040700 mRNA-decapping enzyme, putative, expressed K12611: mRNA-decapping enzyme 1B
17 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
18 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
19 Sobic.002G297600 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
20 Sobic.004G067400 expressed protein -


Gene co-expression network
sample Sobic004G312100 Sobic004G312100 Sobic006G180700 Sobic006G180700 Sobic004G312100--Sobic006G180700 Sobic001G088900 Sobic001G088900 Sobic004G312100--Sobic001G088900 Sobic001G334100 Sobic001G334100 Sobic004G312100--Sobic001G334100 Sobic003G360300 Sobic003G360300 Sobic004G312100--Sobic003G360300 Sobic006G091000 Sobic006G091000 Sobic004G312100--Sobic006G091000 Sobic001G034500 Sobic001G034500 Sobic004G312100--Sobic001G034500 Sobic006G268300 Sobic006G268300 Sobic004G312100--Sobic006G268300 Sobic003G259600 Sobic003G259600 Sobic004G312100--Sobic003G259600 Sobic001G413800 Sobic001G413800 Sobic004G312100--Sobic001G413800 Sobic009G074700 Sobic009G074700 Sobic006G180700--Sobic009G074700 Sobic001G085700 Sobic001G085700 Sobic006G180700--Sobic001G085700 Sobic006G138000 Sobic006G138000 Sobic006G180700--Sobic006G138000 Sobic009G040800 Sobic009G040800 Sobic006G180700--Sobic009G040800 Sobic009G000400 Sobic009G000400 Sobic006G180700--Sobic009G000400 Sobic001G335900 Sobic001G335900 Sobic006G180700--Sobic001G335900 Sobic009G045200 Sobic009G045200 Sobic006G180700--Sobic009G045200 Sobic006G180700--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic006G180700--Sobic005G040900 Sobic010G279900 Sobic010G279900 Sobic001G088900--Sobic010G279900 Sobic001G245900 Sobic001G245900 Sobic001G088900--Sobic001G245900 Sobic001G367100 Sobic001G367100 Sobic001G088900--Sobic001G367100 Sobic001G088900--Sobic006G180700 Sobic001G088900--Sobic009G000400 Sobic001G088900--Sobic001G034500 Sobic010G269300 Sobic010G269300 Sobic001G088900--Sobic010G269300 Sobic001G222000 Sobic001G222000 Sobic001G088900--Sobic001G222000 Sobic001G261585 Sobic001G261585 Sobic001G088900--Sobic001G261585 Sobic007G143500 Sobic007G143500 Sobic001G334100--Sobic007G143500 Sobic003G184400 Sobic003G184400 Sobic001G334100--Sobic003G184400 Sobic005G199200 Sobic005G199200 Sobic001G334100--Sobic005G199200 Sobic001G334100--Sobic003G259600 Sobic005G059400 Sobic005G059400 Sobic001G334100--Sobic005G059400 Sobic002G142600 Sobic002G142600 Sobic001G334100--Sobic002G142600 Sobic001G334100--Sobic006G180700 Sobic004G067400 Sobic004G067400 Sobic001G334100--Sobic004G067400 Sobic005G000300 Sobic005G000300 Sobic001G334100--Sobic005G000300 Sobic003G360300--Sobic003G259600 Sobic001G123600 Sobic001G123600 Sobic003G360300--Sobic001G123600 Sobic003G360300--Sobic010G269300 Sobic007G047600 Sobic007G047600 Sobic003G360300--Sobic007G047600 Sobic006G179300 Sobic006G179300 Sobic003G360300--Sobic006G179300 Sobic002G142700 Sobic002G142700 Sobic003G360300--Sobic002G142700 Sobic004G342300 Sobic004G342300 Sobic003G360300--Sobic004G342300 Sobic004G277400 Sobic004G277400 Sobic003G360300--Sobic004G277400 Sobic008G080500 Sobic008G080500 Sobic003G360300--Sobic008G080500 Sobic006G091000--Sobic009G040800 Sobic005G178950 Sobic005G178950 Sobic006G091000--Sobic005G178950 Sobic004G353400 Sobic004G353400 Sobic006G091000--Sobic004G353400 Sobic006G091000--Sobic005G040900 Sobic004G347100 Sobic004G347100 Sobic006G091000--Sobic004G347100 Sobic010G074900 Sobic010G074900 Sobic006G091000--Sobic010G074900 Sobic007G139400 Sobic007G139400 Sobic006G091000--Sobic007G139400 Sobic010G172400 Sobic010G172400 Sobic006G091000--Sobic010G172400 Sobic005G114400 Sobic005G114400 Sobic006G091000--Sobic005G114400 Sobic001G477700 Sobic001G477700 Sobic001G034500--Sobic001G477700 Sobic003G284000 Sobic003G284000 Sobic001G034500--Sobic003G284000 Sobic006G154100 Sobic006G154100 Sobic001G034500--Sobic006G154100 Sobic001G004100 Sobic001G004100 Sobic001G034500--Sobic001G004100 Sobic001G135500 Sobic001G135500 Sobic001G034500--Sobic001G135500 Sobic001G034500--Sobic001G413800 Sobic003G212900 Sobic003G212900 Sobic001G034500--Sobic003G212900 Sobic001G097500 Sobic001G097500 Sobic001G034500--Sobic001G097500 Sobic007G042900 Sobic007G042900 Sobic001G034500--Sobic007G042900 Sobic001G526300 Sobic001G526300 Sobic006G268300--Sobic001G526300 Sobic006G268300--Sobic005G040900 Sobic006G268300--Sobic001G335900 Sobic006G268300--Sobic009G040800 Sobic003G005900 Sobic003G005900 Sobic006G268300--Sobic003G005900 Sobic010G278600 Sobic010G278600 Sobic006G268300--Sobic010G278600 Sobic006G268300--Sobic006G180700 Sobic006G044000 Sobic006G044000 Sobic006G268300--Sobic006G044000 Sobic010G232900 Sobic010G232900 Sobic006G268300--Sobic010G232900 Sobic003G361400 Sobic003G361400 Sobic003G259600--Sobic003G361400 Sobic003G259600--Sobic003G360300 Sobic001G373000 Sobic001G373000 Sobic003G259600--Sobic001G373000 Sobic003G331000 Sobic003G331000 Sobic003G259600--Sobic003G331000 Sobic004G038100 Sobic004G038100 Sobic003G259600--Sobic004G038100 Sobic003G259600--Sobic010G269300 Sobic003G028400 Sobic003G028400 Sobic003G259600--Sobic003G028400 Sobic003G259600--Sobic002G142700 Sobic003G259600--Sobic001G334100 Sobic001G413800--Sobic001G477700 Sobic001G413800--Sobic006G180700 Sobic001G413800--Sobic001G034500 Sobic001G413800--Sobic006G154100 Sobic006G281700 Sobic006G281700 Sobic001G413800--Sobic006G281700 Sobic001G413800--Sobic007G042900 Sobic010G204400 Sobic010G204400 Sobic001G413800--Sobic010G204400 Sobic004G068500 Sobic004G068500 Sobic001G413800--Sobic004G068500 Sobic002G363000 Sobic002G363000 Sobic001G413800--Sobic002G363000
Octagon: transcription factors


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