Gene annotation
Transcriptome id Sobic.008G040700.2,Sobic.008G040700.1
Synonym Sb08g003510, ATDCP1, DCP1
Functional annotation mRNA-decapping enzyme, putative, expressed
UniProt A0A1B6PBY1 , A0A1B6PB82
Pfam PF06058
Panther DB PTHR16290 PTHR16290:SF3
NCBI CDD KOG2868; Decapping enzyme complex component DCP1
KEGG Orthology K12611; mRNA-decapping enzyme 1B
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08370 : decapping 1
RAP-DB (Rice) LOC_Os11g05650.1 : mRNA-decapping enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a033499 , Zm00025a053924 , Zm00025a012992
Brachypodium KQJ89397 , PNT65418
Barley HORVU5Hr1G040460.5 , HORVU5Hr1G040460.4 , HORVU5Hr1G040460.1 , HORVU5Hr1G040460.3 , HORVU5Hr1G040460.2 , HORVU4Hr1G021700.4 , HORVU4Hr1G021700.5 , HORVU4Hr1G021700.6 , HORVU4Hr1G021700.7 , HORVU4Hr1G021700.1 , HORVU4Hr1G021700.2 , HORVU4Hr1G021700.3
Wheat TraesCS4B02G117300 , TraesCS5B02G125900 , TraesCS5B02G125900 , TraesCS5B02G125900 , TraesCS4D02G115100 , TraesCS5D02G134200 , TraesCS5A02G126700 , TraesCS5A02G126700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G227100 adaptin, putative, expressed -
2 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
3 Sobic.004G145000 importin-8, putative, expressed -
4 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
5 Sobic.003G194100 mitochondrial carrier protein, putative, expressed K15084: SLC25A16, GDA, solute carrier family 25 (mitochondrial carrier protein), member 16
6 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.001G003500 la domain containing protein, putative, expressed K18757: la-related protein 1
8 Sobic.003G099300 expressed protein K18749: LSM14, RAP55, protein LSM14
9 Sobic.003G050900 dolichyl-P-Man Man-PP-dolichyl mannosyltransferase, putative, expressed K03845: alpha-1,3-mannosyltransferase
10 Sobic.001G477700 WD domain, G-beta repeat domain containing protein, expressed K11807: WDTC1, WD and tetratricopeptide repeats protein 1
11 Sobic.003G389300 cyclin-related protein, putative, expressed -
12 Sobic.005G110499 - K14006: protein transport protein SEC23
13 Sobic.001G051700 expressed protein -
14 Sobic.005G115500 bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed K13998: dihydrofolate reductase / thymidylate synthase
15 Sobic.007G042900 BSD domain-containing protein, putative, expressed K03141: TFIIH1, GTF2H1, transcription initiation factor TFIIH subunit 1
16 Sobic.009G120500 golgi transport complex protein-related, putative, expressed -
17 Sobic.001G096000 CWF19-like 2, cell cycle control, putative, expressed -
18 Sobic.001G393700 expressed protein -
19 Sobic.008G147200 tubulin, putative, expressed -
20 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma


Gene co-expression network
sample Sobic008G040700 Sobic008G040700 Sobic003G227100 Sobic003G227100 Sobic008G040700--Sobic003G227100 Sobic003G240700 Sobic003G240700 Sobic008G040700--Sobic003G240700 Sobic004G145000 Sobic004G145000 Sobic008G040700--Sobic004G145000 Sobic003G104000 Sobic003G104000 Sobic008G040700--Sobic003G104000 Sobic003G194100 Sobic003G194100 Sobic008G040700--Sobic003G194100 SobicK004100 SobicK004100 Sobic008G040700--SobicK004100 Sobic001G003500 Sobic001G003500 Sobic008G040700--Sobic001G003500 Sobic003G099300 Sobic003G099300 Sobic008G040700--Sobic003G099300 Sobic003G050900 Sobic003G050900 Sobic008G040700--Sobic003G050900 Sobic006G224800 Sobic006G224800 Sobic003G227100--Sobic006G224800 Sobic005G110499 Sobic005G110499 Sobic003G227100--Sobic005G110499 Sobic003G227100--Sobic003G240700 Sobic001G369000 Sobic001G369000 Sobic003G227100--Sobic001G369000 Sobic003G227100--Sobic003G050900 Sobic004G261600 Sobic004G261600 Sobic003G227100--Sobic004G261600 Sobic003G227100--Sobic008G040700 Sobic006G056200 Sobic006G056200 Sobic003G227100--Sobic006G056200 Sobic003G209200 Sobic003G209200 Sobic003G227100--Sobic003G209200 Sobic003G240700--Sobic001G369000 Sobic001G335900 Sobic001G335900 Sobic003G240700--Sobic001G335900 Sobic001G170100 Sobic001G170100 Sobic003G240700--Sobic001G170100 Sobic006G138000 Sobic006G138000 Sobic003G240700--Sobic006G138000 Sobic003G314700 Sobic003G314700 Sobic003G240700--Sobic003G314700 Sobic003G293000 Sobic003G293000 Sobic003G240700--Sobic003G293000 Sobic009G049400 Sobic009G049400 Sobic003G240700--Sobic009G049400 Sobic001G426600 Sobic001G426600 Sobic003G240700--Sobic001G426600 Sobic003G240700--Sobic003G227100 Sobic006G139100 Sobic006G139100 Sobic004G145000--Sobic006G139100 Sobic004G340400 Sobic004G340400 Sobic004G145000--Sobic004G340400 Sobic006G034500 Sobic006G034500 Sobic004G145000--Sobic006G034500 Sobic001G447300 Sobic001G447300 Sobic004G145000--Sobic001G447300 Sobic001G455800 Sobic001G455800 Sobic004G145000--Sobic001G455800 Sobic002G256700 Sobic002G256700 Sobic004G145000--Sobic002G256700 Sobic003G036400 Sobic003G036400 Sobic004G145000--Sobic003G036400 Sobic004G145000--Sobic003G104000 Sobic006G166200 Sobic006G166200 Sobic004G145000--Sobic006G166200 Sobic003G337300 Sobic003G337300 Sobic003G104000--Sobic003G337300 Sobic003G104000--Sobic002G256700 Sobic006G126100 Sobic006G126100 Sobic003G104000--Sobic006G126100 Sobic001G251100 Sobic001G251100 Sobic003G104000--Sobic001G251100 Sobic002G142900 Sobic002G142900 Sobic003G104000--Sobic002G142900 Sobic002G295500 Sobic002G295500 Sobic003G104000--Sobic002G295500 Sobic004G277200 Sobic004G277200 Sobic003G104000--Sobic004G277200 Sobic004G131300 Sobic004G131300 Sobic003G104000--Sobic004G131300 Sobic006G261400 Sobic006G261400 Sobic003G104000--Sobic006G261400 Sobic006G280000 Sobic006G280000 Sobic003G194100--Sobic006G280000 Sobic003G194100--Sobic003G104000 Sobic007G005500 Sobic007G005500 Sobic003G194100--Sobic007G005500 Sobic003G194100--Sobic004G145000 Sobic003G194100--Sobic004G261600 Sobic003G194100--Sobic002G256700 Sobic004G322400 Sobic004G322400 Sobic003G194100--Sobic004G322400 Sobic003G194100--Sobic003G209200 Sobic003G194100--Sobic003G337300 SobicK004100--Sobic001G369000 Sobic004G039600 Sobic004G039600 SobicK004100--Sobic004G039600 SobicK004100--Sobic003G099300 SobicK004100--Sobic001G335900 Sobic007G120500 Sobic007G120500 SobicK004100--Sobic007G120500 SobicK004100--Sobic009G049400 SobicK004100--Sobic003G240700 Sobic009G226400 Sobic009G226400 SobicK004100--Sobic009G226400 Sobic001G449900 Sobic001G449900 SobicK004100--Sobic001G449900 Sobic004G321700 Sobic004G321700 Sobic001G003500--Sobic004G321700 Sobic008G147200 Sobic008G147200 Sobic001G003500--Sobic008G147200 Sobic002G052700 Sobic002G052700 Sobic001G003500--Sobic002G052700 Sobic001G291800 Sobic001G291800 Sobic001G003500--Sobic001G291800 Sobic005G220000 Sobic005G220000 Sobic001G003500--Sobic005G220000 Sobic010G007100 Sobic010G007100 Sobic001G003500--Sobic010G007100 Sobic004G357400 Sobic004G357400 Sobic001G003500--Sobic004G357400 Sobic004G095300 Sobic004G095300 Sobic001G003500--Sobic004G095300 Sobic006G125900 Sobic006G125900 Sobic001G003500--Sobic006G125900 Sobic010G269100 Sobic010G269100 Sobic003G099300--Sobic010G269100 Sobic003G099300--Sobic004G039600 Sobic005G216300 Sobic005G216300 Sobic003G099300--Sobic005G216300 Sobic003G099300--SobicK004100 Sobic003G099300--Sobic001G369000 Sobic005G115500 Sobic005G115500 Sobic003G099300--Sobic005G115500 Sobic002G256200 Sobic002G256200 Sobic003G099300--Sobic002G256200 Sobic003G099300--Sobic006G056200 Sobic009G231700 Sobic009G231700 Sobic003G099300--Sobic009G231700 Sobic003G050900--Sobic005G110499 Sobic009G003700 Sobic009G003700 Sobic003G050900--Sobic009G003700 Sobic003G050900--Sobic003G227100 Sobic003G284000 Sobic003G284000 Sobic003G050900--Sobic003G284000 Sobic003G050900--Sobic003G209200 Sobic009G077600 Sobic009G077600 Sobic003G050900--Sobic009G077600 Sobic008G055900 Sobic008G055900 Sobic003G050900--Sobic008G055900 Sobic003G050900--Sobic006G166200 Sobic003G023300 Sobic003G023300 Sobic003G050900--Sobic003G023300
Octagon: transcription factors


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