Gene annotation
Transcriptome id Sobic.003G389300.1
Synonym Sb03g042720
Functional annotation cyclin-related protein, putative, expressed
UniProt A0A1W0W0Y0
Pfam -
Panther DB PTHR12444 PTHR12444:SF2
NCBI CDD KOG1877; Putative transmembrane protein cmp44E
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41830 : Uncharacterized protein
RAP-DB (Rice) LOC_Os01g67290.1 : cyclin-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a039447
Brachypodium KQK11022
Barley HORVU3Hr1G089450.9 , HORVU3Hr1G089450.8 , HORVU3Hr1G089450.1 , HORVU3Hr1G089450.3 , HORVU3Hr1G089450.2 , HORVU3Hr1G089450.5 , HORVU3Hr1G089450.4 , HORVU3Hr1G089450.7 , HORVU3Hr1G089450.6 , HORVU3Hr1G089450.15 , HORVU3Hr1G089450.14 , HORVU3Hr1G089450.11 , HORVU3Hr1G089450.10 , HORVU3Hr1G089450.13 , HORVU3Hr1G089450.12
Wheat TraesCS3A02G397500 , TraesCS3A02G397500 , TraesCS3A02G397500 , TraesCS3A02G397500 , TraesCS3D02G391300 , TraesCS3D02G391300 , TraesCS3D02G391300 , TraesCS3D02G391300 , TraesCS3D02G391300 , TraesCS3B02G429400 , TraesCS3B02G429400 , TraesCS3B02G429400 , TraesCS3B02G429400 , TraesCS3B02G429400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G040700 mRNA-decapping enzyme, putative, expressed K12611: mRNA-decapping enzyme 1B
2 Sobic.003G199200 aspartic proteinase-like protein 2 precursor, putative, expressed -
3 Sobic.001G015800 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
4 Sobic.001G163400 roothairless 1, putative, expressed -
5 Sobic.004G344901 - K10357: myosin V
6 Sobic.001G119800 expressed protein -
7 Sobic.001G051700 expressed protein -
8 Sobic.003G227100 adaptin, putative, expressed -
9 Sobic.006G281000 methyltransferase, putative, expressed -
10 Sobic.002G327000 villin protein, putative, expressed -
11 Sobic.006G112100 expressed protein -
12 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
13 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
14 Sobic.001G420800 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
15 Sobic.001G097500 expressed protein -
16 Sobic.006G138000 expressed protein -
17 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.008G135200 importin subunit beta, putative, expressed K14293: KPNB1, importin subunit beta-1
19 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
20 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -


Gene co-expression network
sample Sobic003G389300 Sobic003G389300 Sobic008G040700 Sobic008G040700 Sobic003G389300--Sobic008G040700 Sobic003G199200 Sobic003G199200 Sobic003G389300--Sobic003G199200 Sobic001G015800 Sobic001G015800 Sobic003G389300--Sobic001G015800 Sobic001G163400 Sobic001G163400 Sobic003G389300--Sobic001G163400 Sobic004G344901 Sobic004G344901 Sobic003G389300--Sobic004G344901 Sobic001G119800 Sobic001G119800 Sobic003G389300--Sobic001G119800 Sobic001G051700 Sobic001G051700 Sobic003G389300--Sobic001G051700 Sobic003G227100 Sobic003G227100 Sobic003G389300--Sobic003G227100 Sobic006G281000 Sobic006G281000 Sobic003G389300--Sobic006G281000 Sobic008G040700--Sobic003G227100 Sobic003G240700 Sobic003G240700 Sobic008G040700--Sobic003G240700 Sobic004G145000 Sobic004G145000 Sobic008G040700--Sobic004G145000 Sobic003G104000 Sobic003G104000 Sobic008G040700--Sobic003G104000 Sobic003G194100 Sobic003G194100 Sobic008G040700--Sobic003G194100 SobicK004100 SobicK004100 Sobic008G040700--SobicK004100 Sobic001G003500 Sobic001G003500 Sobic008G040700--Sobic001G003500 Sobic003G099300 Sobic003G099300 Sobic008G040700--Sobic003G099300 Sobic003G050900 Sobic003G050900 Sobic008G040700--Sobic003G050900 Sobic001G393700 Sobic001G393700 Sobic003G199200--Sobic001G393700 Sobic003G199200--Sobic003G389300 Sobic006G056200 Sobic006G056200 Sobic003G199200--Sobic006G056200 Sobic010G017800 Sobic010G017800 Sobic003G199200--Sobic010G017800 Sobic002G327000 Sobic002G327000 Sobic003G199200--Sobic002G327000 Sobic002G137400 Sobic002G137400 Sobic003G199200--Sobic002G137400 Sobic003G199200--Sobic001G163400 Sobic003G199200--Sobic003G227100 Sobic003G199200--Sobic003G240700 Sobic001G015800--Sobic001G163400 Sobic008G124900 Sobic008G124900 Sobic001G015800--Sobic008G124900 Sobic001G015800--Sobic003G104000 Sobic003G331400 Sobic003G331400 Sobic001G015800--Sobic003G331400 Sobic006G033200 Sobic006G033200 Sobic001G015800--Sobic006G033200 Sobic004G286500 Sobic004G286500 Sobic001G015800--Sobic004G286500 Sobic002G134600 Sobic002G134600 Sobic001G015800--Sobic002G134600 Sobic001G096000 Sobic001G096000 Sobic001G015800--Sobic001G096000 Sobic003G337300 Sobic003G337300 Sobic001G015800--Sobic003G337300 Sobic001G163400--Sobic004G344901 Sobic001G163400--Sobic003G337300 Sobic001G163400--Sobic001G015800 Sobic006G131000 Sobic006G131000 Sobic001G163400--Sobic006G131000 Sobic004G039600 Sobic004G039600 Sobic001G163400--Sobic004G039600 Sobic001G163400--Sobic001G096000 Sobic001G415300 Sobic001G415300 Sobic001G163400--Sobic001G415300 Sobic001G124200 Sobic001G124200 Sobic001G163400--Sobic001G124200 Sobic006G163800 Sobic006G163800 Sobic001G163400--Sobic006G163800 Sobic004G344901--Sobic003G331400 Sobic004G344901--Sobic003G337300 Sobic004G344901--Sobic001G163400 Sobic004G344901--Sobic006G131000 Sobic004G004300 Sobic004G004300 Sobic004G344901--Sobic004G004300 Sobic004G344901--Sobic001G415300 Sobic008G003700 Sobic008G003700 Sobic004G344901--Sobic008G003700 Sobic001G281100 Sobic001G281100 Sobic004G344901--Sobic001G281100 Sobic004G344901--Sobic002G137400 Sobic008G015200 Sobic008G015200 Sobic001G119800--Sobic008G015200 Sobic002G427300 Sobic002G427300 Sobic001G119800--Sobic002G427300 Sobic001G119800--Sobic003G389300 Sobic006G112100 Sobic006G112100 Sobic001G119800--Sobic006G112100 Sobic003G435500 Sobic003G435500 Sobic001G119800--Sobic003G435500 Sobic003G314700 Sobic003G314700 Sobic001G119800--Sobic003G314700 Sobic001G119800--Sobic006G281000 Sobic001G385400 Sobic001G385400 Sobic001G119800--Sobic001G385400 Sobic006G156300 Sobic006G156300 Sobic001G119800--Sobic006G156300 Sobic003G416700 Sobic003G416700 Sobic001G051700--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic001G051700--Sobic002G145800 Sobic006G267600 Sobic006G267600 Sobic001G051700--Sobic006G267600 Sobic002G154000 Sobic002G154000 Sobic001G051700--Sobic002G154000 Sobic006G261400 Sobic006G261400 Sobic001G051700--Sobic006G261400 Sobic006G224800 Sobic006G224800 Sobic001G051700--Sobic006G224800 Sobic007G183300 Sobic007G183300 Sobic001G051700--Sobic007G183300 Sobic010G275500 Sobic010G275500 Sobic001G051700--Sobic010G275500 Sobic003G062300 Sobic003G062300 Sobic001G051700--Sobic003G062300 Sobic003G227100--Sobic006G224800 Sobic005G110499 Sobic005G110499 Sobic003G227100--Sobic005G110499 Sobic003G227100--Sobic003G240700 Sobic001G369000 Sobic001G369000 Sobic003G227100--Sobic001G369000 Sobic003G227100--Sobic003G050900 Sobic004G261600 Sobic004G261600 Sobic003G227100--Sobic004G261600 Sobic003G227100--Sobic008G040700 Sobic003G227100--Sobic006G056200 Sobic003G209200 Sobic003G209200 Sobic003G227100--Sobic003G209200 Sobic006G281000--Sobic003G314700 Sobic006G281000--Sobic002G427300 Sobic006G281000--Sobic003G389300 Sobic003G275000 Sobic003G275000 Sobic006G281000--Sobic003G275000 Sobic006G281000--Sobic002G327000 Sobic009G105900 Sobic009G105900 Sobic006G281000--Sobic009G105900 Sobic006G208400 Sobic006G208400 Sobic006G281000--Sobic006G208400 Sobic008G135200 Sobic008G135200 Sobic006G281000--Sobic008G135200 Sobic006G281000--Sobic001G119800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.