Gene annotation
Transcriptome id Sobic.001G119800.2,Sobic.001G119800.1
Synonym Sb01g010580
Functional annotation expressed protein
UniProt A0A1Z5S5N2 , A0A1Z5S5C3
Pfam PF04576
Panther DB PTHR31448 PTHR31448:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16720 : Protein of unknown function, DUF593
RAP-DB (Rice) LOC_Os03g15410.1,LOC_Os03g50100.1 : expressed protein
MaizeGDB (Corn) Zm00025a007809 , Zm00025a017013
Brachypodium KQK13594 , KQK13593 , KQK13592 , KQK13591 , PNT74250 , PNT74251 , PNT74252
Barley HORVU4Hr1G007120.4 , HORVU4Hr1G007120.5 , HORVU4Hr1G007120.6 , HORVU4Hr1G007120.1 , HORVU4Hr1G007120.2 , HORVU4Hr1G007120.3 , HORVU0Hr1G033330.2 , HORVU0Hr1G033330.3 , HORVU0Hr1G033330.1
Wheat TraesCS4B02G044000 , TraesCS4B02G044000 , TraesCS4A02G270100 , TraesCS4D02G041500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G015200 NAP1, putative, expressed K05750: NCKAP1, NCK-associated protein 1
2 Sobic.002G427300 protein phosphotase protein, putative, expressed -
3 Sobic.003G389300 cyclin-related protein, putative, expressed -
4 Sobic.006G112100 expressed protein -
5 Sobic.003G435500 expressed protein -
6 Sobic.003G314700 expressed protein -
7 Sobic.006G281000 methyltransferase, putative, expressed -
8 Sobic.001G385400 guanine nucleotide exchange factor, putative, expressed -
9 Sobic.006G156300 WD-40 repeat family protein, putative, expressed -
10 Sobic.002G143200 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
11 Sobic.001G078100 expressed protein -
12 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
13 Sobic.003G277900 "D61(Ortholog in rice:Morinaka et al., 2006(PubMedID : 31659871)@systemin receptor SR160 precursor, putative, expressed K13415: protein brassinosteroid insensitive 1
14 Sobic.009G000300 serine/threonine-protein kinase, putative, expressed -
15 Sobic.001G384000 expressed protein -
16 Sobic.006G140600 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
17 Sobic.003G340900 SAG20, putative, expressed -
18 Sobic.009G126000 mannosylglycoprotein endo-beta-mannosidase, putative, expressed K18577: mannosylglycoprotein endo-beta-mannosidase
19 Sobic.006G173200 beige/BEACH domain containing protein, expressed -
20 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88


Gene co-expression network
sample Sobic001G119800 Sobic001G119800 Sobic008G015200 Sobic008G015200 Sobic001G119800--Sobic008G015200 Sobic002G427300 Sobic002G427300 Sobic001G119800--Sobic002G427300 Sobic003G389300 Sobic003G389300 Sobic001G119800--Sobic003G389300 Sobic006G112100 Sobic006G112100 Sobic001G119800--Sobic006G112100 Sobic003G435500 Sobic003G435500 Sobic001G119800--Sobic003G435500 Sobic003G314700 Sobic003G314700 Sobic001G119800--Sobic003G314700 Sobic006G281000 Sobic006G281000 Sobic001G119800--Sobic006G281000 Sobic001G385400 Sobic001G385400 Sobic001G119800--Sobic001G385400 Sobic006G156300 Sobic006G156300 Sobic001G119800--Sobic006G156300 Sobic008G015200--Sobic001G385400 Sobic008G192700 Sobic008G192700 Sobic008G015200--Sobic008G192700 Sobic002G374400 Sobic002G374400 Sobic008G015200--Sobic002G374400 Sobic002G074000 Sobic002G074000 Sobic008G015200--Sobic002G074000 Sobic009G052100 Sobic009G052100 Sobic008G015200--Sobic009G052100 Sobic009G167100 Sobic009G167100 Sobic008G015200--Sobic009G167100 Sobic006G179300 Sobic006G179300 Sobic008G015200--Sobic006G179300 Sobic002G143200 Sobic002G143200 Sobic008G015200--Sobic002G143200 Sobic009G049200 Sobic009G049200 Sobic008G015200--Sobic009G049200 Sobic006G208400 Sobic006G208400 Sobic002G427300--Sobic006G208400 Sobic002G427300--Sobic001G119800 Sobic002G427300--Sobic006G281000 Sobic006G140600 Sobic006G140600 Sobic002G427300--Sobic006G140600 Sobic010G085200 Sobic010G085200 Sobic002G427300--Sobic010G085200 Sobic004G006700 Sobic004G006700 Sobic002G427300--Sobic004G006700 Sobic002G427300--Sobic003G314700 Sobic001G460500 Sobic001G460500 Sobic002G427300--Sobic001G460500 Sobic001G036800 Sobic001G036800 Sobic002G427300--Sobic001G036800 Sobic008G040700 Sobic008G040700 Sobic003G389300--Sobic008G040700 Sobic003G199200 Sobic003G199200 Sobic003G389300--Sobic003G199200 Sobic001G015800 Sobic001G015800 Sobic003G389300--Sobic001G015800 Sobic001G163400 Sobic001G163400 Sobic003G389300--Sobic001G163400 Sobic004G344901 Sobic004G344901 Sobic003G389300--Sobic004G344901 Sobic003G389300--Sobic001G119800 Sobic001G051700 Sobic001G051700 Sobic003G389300--Sobic001G051700 Sobic003G227100 Sobic003G227100 Sobic003G389300--Sobic003G227100 Sobic003G389300--Sobic006G281000 Sobic006G112100--Sobic006G156300 Sobic006G112100--Sobic001G119800 Sobic006G112100--Sobic003G389300 Sobic004G316700 Sobic004G316700 Sobic006G112100--Sobic004G316700 Sobic008G013300 Sobic008G013300 Sobic006G112100--Sobic008G013300 Sobic009G229300 Sobic009G229300 Sobic006G112100--Sobic009G229300 Sobic010G017800 Sobic010G017800 Sobic006G112100--Sobic010G017800 Sobic009G126000 Sobic009G126000 Sobic006G112100--Sobic009G126000 Sobic006G112100--Sobic001G163400 Sobic003G435500--Sobic001G385400 Sobic010G138900 Sobic010G138900 Sobic003G435500--Sobic010G138900 Sobic001G143600 Sobic001G143600 Sobic003G435500--Sobic001G143600 Sobic002G127400 Sobic002G127400 Sobic003G435500--Sobic002G127400 Sobic006G173200 Sobic006G173200 Sobic003G435500--Sobic006G173200 Sobic003G144300 Sobic003G144300 Sobic003G435500--Sobic003G144300 Sobic010G262100 Sobic010G262100 Sobic003G435500--Sobic010G262100 Sobic004G038100 Sobic004G038100 Sobic003G435500--Sobic004G038100 Sobic003G435500--Sobic002G143200 Sobic003G029600 Sobic003G029600 Sobic003G314700--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic003G314700--Sobic008G124800 Sobic001G437400 Sobic001G437400 Sobic003G314700--Sobic001G437400 Sobic003G240700 Sobic003G240700 Sobic003G314700--Sobic003G240700 Sobic003G405500 Sobic003G405500 Sobic003G314700--Sobic003G405500 Sobic007G019300 Sobic007G019300 Sobic003G314700--Sobic007G019300 Sobic004G204100 Sobic004G204100 Sobic003G314700--Sobic004G204100 Sobic001G426600 Sobic001G426600 Sobic003G314700--Sobic001G426600 Sobic002G412700 Sobic002G412700 Sobic003G314700--Sobic002G412700 Sobic006G281000--Sobic003G314700 Sobic006G281000--Sobic002G427300 Sobic006G281000--Sobic003G389300 Sobic003G275000 Sobic003G275000 Sobic006G281000--Sobic003G275000 Sobic002G327000 Sobic002G327000 Sobic006G281000--Sobic002G327000 Sobic009G105900 Sobic009G105900 Sobic006G281000--Sobic009G105900 Sobic006G281000--Sobic006G208400 Sobic008G135200 Sobic008G135200 Sobic006G281000--Sobic008G135200 Sobic006G281000--Sobic001G119800 Sobic001G385400--Sobic001G143600 Sobic001G385400--Sobic002G143200 Sobic001G385400--Sobic003G435500 Sobic001G385400--Sobic008G015200 Sobic010G250800 Sobic010G250800 Sobic001G385400--Sobic010G250800 Sobic001G507200 Sobic001G507200 Sobic001G385400--Sobic001G507200 Sobic002G002100 Sobic002G002100 Sobic001G385400--Sobic002G002100 Sobic001G385400--Sobic009G167100 Sobic001G385400--Sobic006G140600 Sobic006G156300--Sobic006G112100 Sobic003G259400 Sobic003G259400 Sobic006G156300--Sobic003G259400 Sobic006G156300--Sobic001G119800 Sobic001G422700 Sobic001G422700 Sobic006G156300--Sobic001G422700 Sobic007G112000 Sobic007G112000 Sobic006G156300--Sobic007G112000 Sobic004G279100 Sobic004G279100 Sobic006G156300--Sobic004G279100 Sobic003G340900 Sobic003G340900 Sobic006G156300--Sobic003G340900 Sobic006G156300--Sobic002G427300 Sobic006G156300--Sobic003G275000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.