Gene annotation
Transcriptome id Sobic.006G281000.1
Synonym Sb06g034130
Functional annotation methyltransferase, putative, expressed
UniProt C5YB55
Pfam PF03141
Panther DB PTHR10108 PTHR10108:SF784
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G64030 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os04g59590.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a057445
Brachypodium KQJ85517
Barley HORVU2Hr1G127220.1 , HORVU2Hr1G127220.2 , HORVU2Hr1G127220.4 , HORVU2Hr1G127220.5
Wheat TraesCSU02G022400 , TraesCS2D02G299000 , TraesCS2D02G569900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G314700 expressed protein -
2 Sobic.002G427300 protein phosphotase protein, putative, expressed -
3 Sobic.003G389300 cyclin-related protein, putative, expressed -
4 Sobic.003G275000 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
5 Sobic.002G327000 villin protein, putative, expressed -
6 Sobic.009G105900 amino acid permease family protein, putative, expressed K14427: SLC12A4_6, solute carrier family 12 (potassium/chloride transporter), member 4/6
7 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88
8 Sobic.008G135200 importin subunit beta, putative, expressed K14293: KPNB1, importin subunit beta-1
9 Sobic.001G119800 expressed protein -
10 Sobic.008G088830 - -
11 Sobic.003G029600 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
12 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
13 Sobic.006G173200 beige/BEACH domain containing protein, expressed -
14 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
15 Sobic.009G120500 golgi transport complex protein-related, putative, expressed -
16 Sobic.010G236600 oligopeptidase, putative, expressed K01410: mitochondrial intermediate peptidase
17 Sobic.009G045900 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
18 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
19 Sobic.001G426600 SH3 domain containing protein, expressed -
20 Sobic.003G293000 expressed protein -


Gene co-expression network
sample Sobic006G281000 Sobic006G281000 Sobic003G314700 Sobic003G314700 Sobic006G281000--Sobic003G314700 Sobic002G427300 Sobic002G427300 Sobic006G281000--Sobic002G427300 Sobic003G389300 Sobic003G389300 Sobic006G281000--Sobic003G389300 Sobic003G275000 Sobic003G275000 Sobic006G281000--Sobic003G275000 Sobic002G327000 Sobic002G327000 Sobic006G281000--Sobic002G327000 Sobic009G105900 Sobic009G105900 Sobic006G281000--Sobic009G105900 Sobic006G208400 Sobic006G208400 Sobic006G281000--Sobic006G208400 Sobic008G135200 Sobic008G135200 Sobic006G281000--Sobic008G135200 Sobic001G119800 Sobic001G119800 Sobic006G281000--Sobic001G119800 Sobic003G029600 Sobic003G029600 Sobic003G314700--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic003G314700--Sobic008G124800 Sobic001G437400 Sobic001G437400 Sobic003G314700--Sobic001G437400 Sobic003G240700 Sobic003G240700 Sobic003G314700--Sobic003G240700 Sobic003G405500 Sobic003G405500 Sobic003G314700--Sobic003G405500 Sobic007G019300 Sobic007G019300 Sobic003G314700--Sobic007G019300 Sobic004G204100 Sobic004G204100 Sobic003G314700--Sobic004G204100 Sobic001G426600 Sobic001G426600 Sobic003G314700--Sobic001G426600 Sobic002G412700 Sobic002G412700 Sobic003G314700--Sobic002G412700 Sobic002G427300--Sobic006G208400 Sobic002G427300--Sobic001G119800 Sobic002G427300--Sobic006G281000 Sobic006G140600 Sobic006G140600 Sobic002G427300--Sobic006G140600 Sobic010G085200 Sobic010G085200 Sobic002G427300--Sobic010G085200 Sobic004G006700 Sobic004G006700 Sobic002G427300--Sobic004G006700 Sobic002G427300--Sobic003G314700 Sobic001G460500 Sobic001G460500 Sobic002G427300--Sobic001G460500 Sobic001G036800 Sobic001G036800 Sobic002G427300--Sobic001G036800 Sobic008G040700 Sobic008G040700 Sobic003G389300--Sobic008G040700 Sobic003G199200 Sobic003G199200 Sobic003G389300--Sobic003G199200 Sobic001G015800 Sobic001G015800 Sobic003G389300--Sobic001G015800 Sobic001G163400 Sobic001G163400 Sobic003G389300--Sobic001G163400 Sobic004G344901 Sobic004G344901 Sobic003G389300--Sobic004G344901 Sobic003G389300--Sobic001G119800 Sobic001G051700 Sobic001G051700 Sobic003G389300--Sobic001G051700 Sobic003G227100 Sobic003G227100 Sobic003G389300--Sobic003G227100 Sobic003G389300--Sobic006G281000 Sobic003G275000--Sobic006G281000 Sobic010G017800 Sobic010G017800 Sobic003G275000--Sobic010G017800 Sobic003G259400 Sobic003G259400 Sobic003G275000--Sobic003G259400 Sobic003G275000--Sobic002G427300 Sobic006G032900 Sobic006G032900 Sobic003G275000--Sobic006G032900 Sobic006G156300 Sobic006G156300 Sobic003G275000--Sobic006G156300 Sobic003G340900 Sobic003G340900 Sobic003G275000--Sobic003G340900 Sobic006G112100 Sobic006G112100 Sobic003G275000--Sobic006G112100 Sobic006G268300 Sobic006G268300 Sobic003G275000--Sobic006G268300 Sobic002G327000--Sobic004G344901 Sobic003G144300 Sobic003G144300 Sobic002G327000--Sobic003G144300 Sobic002G327000--Sobic009G105900 Sobic002G327000--Sobic008G124800 Sobic002G327000--Sobic001G426600 Sobic002G327000--Sobic003G227100 Sobic003G337300 Sobic003G337300 Sobic002G327000--Sobic003G337300 Sobic002G327000--Sobic001G163400 Sobic002G327000--Sobic001G051700 Sobic009G105900--Sobic002G327000 Sobic002G423500 Sobic002G423500 Sobic009G105900--Sobic002G423500 Sobic006G056200 Sobic006G056200 Sobic009G105900--Sobic006G056200 Sobic007G010900 Sobic007G010900 Sobic009G105900--Sobic007G010900 Sobic006G173200 Sobic006G173200 Sobic009G105900--Sobic006G173200 Sobic005G163700 Sobic005G163700 Sobic009G105900--Sobic005G163700 Sobic004G047200 Sobic004G047200 Sobic009G105900--Sobic004G047200 Sobic009G105900--Sobic001G460500 Sobic002G194800 Sobic002G194800 Sobic009G105900--Sobic002G194800 Sobic004G354000 Sobic004G354000 Sobic006G208400--Sobic004G354000 Sobic010G236600 Sobic010G236600 Sobic006G208400--Sobic010G236600 Sobic008G017100 Sobic008G017100 Sobic006G208400--Sobic008G017100 Sobic010G224700 Sobic010G224700 Sobic006G208400--Sobic010G224700 Sobic001G408300 Sobic001G408300 Sobic006G208400--Sobic001G408300 Sobic006G208400--Sobic001G460500 Sobic002G423400 Sobic002G423400 Sobic006G208400--Sobic002G423400 Sobic006G208400--Sobic002G427300 Sobic006G208400--Sobic003G314700 Sobic002G020700 Sobic002G020700 Sobic008G135200--Sobic002G020700 Sobic009G045900 Sobic009G045900 Sobic008G135200--Sobic009G045900 Sobic006G073200 Sobic006G073200 Sobic008G135200--Sobic006G073200 Sobic008G157200 Sobic008G157200 Sobic008G135200--Sobic008G157200 Sobic002G350600 Sobic002G350600 Sobic008G135200--Sobic002G350600 Sobic001G251100 Sobic001G251100 Sobic008G135200--Sobic001G251100 Sobic008G135200--Sobic003G029600 Sobic008G033500 Sobic008G033500 Sobic008G135200--Sobic008G033500 Sobic007G054800 Sobic007G054800 Sobic008G135200--Sobic007G054800 Sobic008G015200 Sobic008G015200 Sobic001G119800--Sobic008G015200 Sobic001G119800--Sobic002G427300 Sobic001G119800--Sobic003G389300 Sobic001G119800--Sobic006G112100 Sobic003G435500 Sobic003G435500 Sobic001G119800--Sobic003G435500 Sobic001G119800--Sobic003G314700 Sobic001G119800--Sobic006G281000 Sobic001G385400 Sobic001G385400 Sobic001G119800--Sobic001G385400 Sobic001G119800--Sobic006G156300
Octagon: transcription factors


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